RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 TSPYL2Q9H2G4 693 aaPredicted RBP11.22□□□□□ -0.61
NPLOC4-221ENST00000625705 ABCC1P33527 1531 aa11.21□□□□□ -0.61
NPLOC4-221ENST00000625705 ZNF518AQ6AHZ1 1483 aa11.21□□□□□ -0.61
NPLOC4-221ENST00000625705 POGZQ7Z3K3 1410 aa11.21□□□□□ -0.61
NPLOC4-221ENST00000625705 KANK4Q5T7N3 995 aaPredicted RBP11.21□□□□□ -0.61
NPLOC4-221ENST00000625705 SAMD9LQ8IVG5 1584 aa11.2□□□□□ -0.62
NPLOC4-221ENST00000625705 SYCP2Q9BX26 1530 aa11.2□□□□□ -0.62
NPLOC4-221ENST00000625705 PLEKHH2Q8IVE3 1493 aa11.2□□□□□ -0.62
NPLOC4-221ENST00000625705 ZMYM4Q5VZL5 1548 aa11.19□□□□□ -0.62
NPLOC4-221ENST00000625705 ZFYVE16Q7Z3T8 1539 aa11.19□□□□□ -0.62
NPLOC4-221ENST00000625705 ARHGEF40Q8TER5 1519 aa11.19□□□□□ -0.62
NPLOC4-221ENST00000625705 HECW2Q9P2P5 1572 aa11.18□□□□□ -0.62
NPLOC4-221ENST00000625705 ARID4BQ4LE39 1312 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-221ENST00000625705 CAMSAP2Q08AD1 1489 aa11.17□□□□□ -0.62
NPLOC4-221ENST00000625705 MYOM3Q5VTT5 1437 aa11.17□□□□□ -0.62
NPLOC4-221ENST00000625705 HNRNPMP52272 730 aaKnown RBP eCLIP11.16□□□□□ -0.622e-6■■■■□ 22.6
NPLOC4-221ENST00000625705 MAGI2Q86UL8 1455 aa11.15□□□□□ -0.62
NPLOC4-221ENST00000625705 LHX8Q68G74 356 aa11.15□□□□□ -0.62
NPLOC4-221ENST00000625705 AFAP1Q8N556 730 aa11.15□□□□□ -0.62
NPLOC4-221ENST00000625705 TRAPPC8Q9Y2L5 1435 aa11.15□□□□□ -0.62
NPLOC4-221ENST00000625705 KDM5CP41229 1560 aa11.15□□□□□ -0.62
NPLOC4-221ENST00000625705 ZNF644Q9H582 1327 aaPredicted RBP11.14□□□□□ -0.63
NPLOC4-221ENST00000625705 PPARGC1BQ86YN6 1023 aaKnown RBP11.14□□□□□ -0.63
NPLOC4-221ENST00000625705 RASEFQ8IZ41 740 aa11.14□□□□□ -0.63
NPLOC4-221ENST00000625705 KIAA1107Q9UPP5 1409 aa11.14□□□□□ -0.63
NPLOC4-221ENST00000625705 ARHGEF12Q9NZN5 1544 aa11.14□□□□□ -0.63
NPLOC4-221ENST00000625705 SPAG9O60271 1321 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-221ENST00000625705 YEATS2Q9ULM3 1422 aa11.13□□□□□ -0.63
NPLOC4-221ENST00000625705 CCDC61Q9Y6R9 512 aa11.13□□□□□ -0.63
NPLOC4-221ENST00000625705 MIA2Q96PC5 1412 aa11.12□□□□□ -0.63
NPLOC4-221ENST00000625705 PTPN23Q9H3S7 1636 aa11.12□□□□□ -0.63
NPLOC4-221ENST00000625705 CCDC141Q6ZP82 1450 aa11.12□□□□□ -0.63
NPLOC4-221ENST00000625705 C9orf84Q5VXU9 1444 aa11.11□□□□□ -0.63
NPLOC4-221ENST00000625705 ATP7AQ04656 1500 aa11.11□□□□□ -0.63
NPLOC4-221ENST00000625705 ABCA6Q8N139 1617 aa11.11□□□□□ -0.63
NPLOC4-221ENST00000625705 MS4A3Q96HJ5 214 aa11.11□□□□□ -0.63
NPLOC4-221ENST00000625705 FGD6Q6ZV73 1430 aa11.1□□□□□ -0.63
NPLOC4-221ENST00000625705 ATP10AO60312 1499 aa11.1□□□□□ -0.63
NPLOC4-221ENST00000625705 MLH3Q9UHC1 1453 aa11.1□□□□□ -0.63
NPLOC4-221ENST00000625705 DIP2CQ9Y2E4 1556 aa11.1□□□□□ -0.63
NPLOC4-221ENST00000625705 KIDINS220Q9ULH0 1771 aa11.09□□□□□ -0.63
NPLOC4-221ENST00000625705 INO80Q9ULG1 1556 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-221ENST00000625705 FAM50AQ14320 339 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-221ENST00000625705 ZBTB47Q9UFB7 747 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-221ENST00000625705 ARHGEF5Q12774 1597 aa11.08□□□□□ -0.64
NPLOC4-221ENST00000625705 TSPY4P0CV99 314 aa11.08□□□□□ -0.64
NPLOC4-221ENST00000625705 TSPY10P0CW01 314 aa11.08□□□□□ -0.64
NPLOC4-221ENST00000625705 RSPH4AQ5TD94 716 aa11.08□□□□□ -0.64
NPLOC4-221ENST00000625705 FBXO3Q9UK99 471 aa11.08□□□□□ -0.64
NPLOC4-221ENST00000625705 MBD5Q9P267 1494 aa11.07□□□□□ -0.64
NPLOC4-221ENST00000625705 MLECQ14165 292 aa11.07□□□□□ -0.64
NPLOC4-221ENST00000625705 ADGBQ8N7X0 1667 aa11.07□□□□□ -0.64
NPLOC4-221ENST00000625705 BCORL1Q5H9F3 1711 aa11.06□□□□□ -0.64
NPLOC4-221ENST00000625705 KIF12Q96FN5 646 aa11.06□□□□□ -0.64
NPLOC4-221ENST00000625705 CROCC2H7BZ55 1655 aa11.05□□□□□ -0.64
NPLOC4-221ENST00000625705 NUBP1P53384 320 aa11.05□□□□□ -0.64
NPLOC4-221ENST00000625705 REREQ9P2R6 1566 aa11.04□□□□□ -0.64
NPLOC4-221ENST00000625705 KDM4FA0A1W2PPD8 638 aa11.04□□□□□ -0.64
NPLOC4-221ENST00000625705 ESF1Q9H501 851 aaKnown RBP11.04□□□□□ -0.64
NPLOC4-221ENST00000625705 DNMT1P26358 1616 aaKnown RBP11.04□□□□□ -0.64
NPLOC4-221ENST00000625705 A2MP01023 1474 aa11.04□□□□□ -0.64
NPLOC4-221ENST00000625705 TCOF1Q13428 1488 aaKnown RBP11.04□□□□□ -0.64
NPLOC4-221ENST00000625705 SIGLEC1Q9BZZ2 1709 aa11.04□□□□□ -0.64
NPLOC4-221ENST00000625705 FER1L4A9Z1Z3 1794 aa11.03□□□□□ -0.64
NPLOC4-221ENST00000625705 RTEL1-TNFRSF6BF6WH68 1400 aa11.03□□□□□ -0.64
NPLOC4-221ENST00000625705 MADDQ8WXG6 1647 aa11.03□□□□□ -0.64
NPLOC4-221ENST00000625705 RIMS1Q86UR5 1692 aaKnown RBP11.03□□□□□ -0.64
NPLOC4-221ENST00000625705 DAPK1P53355 1430 aa11.02□□□□□ -0.64
NPLOC4-221ENST00000625705 PELP1Q8IZL8 1130 aaKnown RBP11.02□□□□□ -0.65
NPLOC4-221ENST00000625705 MAST1Q9Y2H9 1570 aa11.02□□□□□ -0.65
NPLOC4-221ENST00000625705 ADAMTSL3P82987 1691 aa11.01□□□□□ -0.65
NPLOC4-221ENST00000625705 SHANK2Q9UPX8 1470 aa11.01□□□□□ -0.65
NPLOC4-221ENST00000625705 MAP3K13O43283 966 aa11.01□□□□□ -0.65
NPLOC4-221ENST00000625705 ITGAEP38570 1179 aa11.01□□□□□ -0.65
NPLOC4-221ENST00000625705 AGLP35573 1532 aa11□□□□□ -0.65
NPLOC4-221ENST00000625705 PLXNC1O60486 1568 aa11□□□□□ -0.65
NPLOC4-221ENST00000625705 ABCC5O15440 1437 aa11□□□□□ -0.65
NPLOC4-221ENST00000625705 ATMINO43313 823 aaPredicted RBP10.99□□□□□ -0.65
NPLOC4-221ENST00000625705 CHIC2Q9UKJ5 165 aa10.99□□□□□ -0.65
NPLOC4-221ENST00000625705 ANKRD30AQ9BXX3 1397 aa10.99□□□□□ -0.65
NPLOC4-221ENST00000625705 ASTLQ6HA08 431 aaPredicted RBP10.98□□□□□ -0.65
NPLOC4-221ENST00000625705 GGT6Q6P531 493 aa10.98□□□□□ -0.65
NPLOC4-221ENST00000625705 KIF15Q9NS87 1388 aa10.98□□□□□ -0.65
NPLOC4-221ENST00000625705 KIF3BO15066 747 aa10.97□□□□□ -0.65
NPLOC4-221ENST00000625705 VASPP50552 380 aaPredicted RBP10.97□□□□□ -0.65
NPLOC4-221ENST00000625705 FAM212AQ96EL1 285 aa10.97□□□□□ -0.65
NPLOC4-221ENST00000625705 RRP7BPQ9NSQ0 103 aa10.97□□□□□ -0.65
NPLOC4-221ENST00000625705 DHX29Q7Z478 1369 aaKnown RBP10.97□□□□□ -0.65
NPLOC4-221ENST00000625705 PTPRMP28827 1452 aa10.97□□□□□ -0.65
NPLOC4-221ENST00000625705 DUOX2Q9NRD8 1548 aa10.97□□□□□ -0.65
NPLOC4-221ENST00000625705 TRPC6Q9Y210 931 aa10.96□□□□□ -0.65
NPLOC4-221ENST00000625705 EIF2AK4Q9P2K8 1649 aaKnown RBP10.95□□□□□ -0.66
NPLOC4-221ENST00000625705 CNTLNQ9NXG0 1405 aa10.94□□□□□ -0.66
NPLOC4-221ENST00000625705 CLTCQ00610 1675 aaKnown RBP10.94□□□□□ -0.66
NPLOC4-221ENST00000625705 RRBP1Q9P2E9 1410 aaKnown RBP10.93□□□□□ -0.66
NPLOC4-221ENST00000625705 KLHL34Q8N239 644 aa10.93□□□□□ -0.66
NPLOC4-221ENST00000625705 BMP2KQ9NSY1 1161 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-221ENST00000625705 ERBINQ96RT1 1412 aa10.92□□□□□ -0.66
NPLOC4-221ENST00000625705 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.92□□□□□ -0.66
NPLOC4-221ENST00000625705 POTEB2H3BUK9 544 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms