RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 EHBP1L1Q8N3D4 1523 aa15.1■□□□□ 0.01
CHD2-205ENST00000625662 C1orf141Q5JVX7 400 aa15.1■□□□□ 0.01
CHD2-205ENST00000625662 FGD6Q6ZV73 1430 aa15.09■□□□□ 0.01
CHD2-205ENST00000625662 ANKRD50Q9ULJ7 1429 aa15.09■□□□□ 0.01
CHD2-205ENST00000625662 PPP6R1Q9UPN7 881 aa15.09■□□□□ 0.01
CHD2-205ENST00000625662 U2AF1L5P0DN76 240 aaPredicted RBP15.09■□□□□ 0.01
CHD2-205ENST00000625662 U2AF1Q01081 240 aaKnown RBP eCLIP15.09■□□□□ 0.01
CHD2-205ENST00000625662 WASHC2AQ641Q2 1341 aa15.09■□□□□ 0.01
CHD2-205ENST00000625662 NUTM2FA1L443 756 aa15.09■□□□□ 0.01
CHD2-205ENST00000625662 STK31Q9BXU1 1019 aa15.09■□□□□ 0.01
CHD2-205ENST00000625662 AKNAQ7Z591 1439 aa15.09■□□□□ 0.01
CHD2-205ENST00000625662 G3V3G9 751 aa15.08■□□□□ 0.01
CHD2-205ENST00000625662 DCAF8Q5TAQ9 597 aa15.08■□□□□ 0.01
CHD2-205ENST00000625662 RRBP1Q9P2E9 1410 aaKnown RBP15.08■□□□□ 0
CHD2-205ENST00000625662 IPO8O15397 1037 aaKnown RBP15.08■□□□□ 0
CHD2-205ENST00000625662 ZNF330Q9Y3S2 320 aaPredicted RBP15.08■□□□□ 0
CHD2-205ENST00000625662 HSPA5P11021 654 aaKnown RBP15.08■□□□□ 0
CHD2-205ENST00000625662 MIA2Q96PC5 1412 aa15.07■□□□□ 0
CHD2-205ENST00000625662 GTF2E1P29083 439 aaPredicted RBP15.07■□□□□ 0
CHD2-205ENST00000625662 NCOA2Q15596 1464 aa15.07■□□□□ 0
CHD2-205ENST00000625662 CGNL1Q0VF96 1302 aa15.06■□□□□ 0
CHD2-205ENST00000625662 PHLDB1Q86UU1 1377 aa15.06■□□□□ 0
CHD2-205ENST00000625662 URB2Q14146 1524 aaKnown RBP15.05■□□□□ -0
CHD2-205ENST00000625662 CDK11BP21127 795 aaKnown RBP15.05■□□□□ -0
CHD2-205ENST00000625662 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.04■□□□□ -01e-6■■■□□ 16.7
CHD2-205ENST00000625662 CFAP44Q96MT7 982 aa15.04■□□□□ -0
CHD2-205ENST00000625662 MINK1Q8N4C8 1332 aaPredicted RBP15.04■□□□□ -0
CHD2-205ENST00000625662 ANP32BQ92688 251 aaKnown RBP15.04■□□□□ -0
CHD2-205ENST00000625662 L3MBTL2Q969R5 705 aa15.04■□□□□ -0
CHD2-205ENST00000625662 LTV1Q96GA3 475 aaPredicted RBP15.03■□□□□ -0
CHD2-205ENST00000625662 LRRC9Q6ZRR7 1453 aa15.03■□□□□ -0
CHD2-205ENST00000625662 MSH5O43196 834 aa15.02■□□□□ -0
CHD2-205ENST00000625662 PRXQ9BXM0 1461 aa15.02□□□□□ -0.01
CHD2-205ENST00000625662 RAPGEF3O95398 923 aa15.02□□□□□ -0.01
CHD2-205ENST00000625662 RPGRIP1LQ68CZ1 1315 aa15.01□□□□□ -0.01
CHD2-205ENST00000625662 UNC13AQ9UPW8 1703 aa15.01□□□□□ -0.01
CHD2-205ENST00000625662 CENPJQ9HC77 1338 aaPredicted RBP15□□□□□ -0.01
CHD2-205ENST00000625662 TAF7LQ5H9L4 462 aa15□□□□□ -0.01
CHD2-205ENST00000625662 DENND4BO75064 1496 aaPredicted RBP15□□□□□ -0.01
CHD2-205ENST00000625662 TTC5Q8N0Z6 440 aa15□□□□□ -0.01
CHD2-205ENST00000625662 FKBP8Q14318 412 aa15□□□□□ -0.01
CHD2-205ENST00000625662 HFM1A2PYH4 1435 aa15□□□□□ -0.01
CHD2-205ENST00000625662 C9orf84Q5VXU9 1444 aa14.99□□□□□ -0.01
CHD2-205ENST00000625662 RAPGEF4Q8WZA2 1011 aa14.98□□□□□ -0.01
CHD2-205ENST00000625662 FRAT1Q92837 279 aaPredicted RBP14.98□□□□□ -0.01
CHD2-205ENST00000625662 ADGRL1O94910 1474 aa14.97□□□□□ -0.01
CHD2-205ENST00000625662 TEFQ10587 303 aa14.97□□□□□ -0.01
CHD2-205ENST00000625662 ZNF644Q9H582 1327 aaPredicted RBP14.96□□□□□ -0.01
CHD2-205ENST00000625662 EPRSP07814 1512 aaKnown RBP14.95□□□□□ -0.02
CHD2-205ENST00000625662 ESCO1Q5FWF5 840 aa14.94□□□□□ -0.02
CHD2-205ENST00000625662 KCNJ4P48050 445 aa14.94□□□□□ -0.02
CHD2-205ENST00000625662 KIF14Q15058 1648 aa14.93□□□□□ -0.02
CHD2-205ENST00000625662 FGD1P98174 961 aa14.93□□□□□ -0.02
CHD2-205ENST00000625662 NCLP19338 710 aaKnown RBP14.93□□□□□ -0.02
CHD2-205ENST00000625662 ZNF608Q9ULD9 1512 aaPredicted RBP14.93□□□□□ -0.02
CHD2-205ENST00000625662 GORABQ5T7V8 394 aa14.92□□□□□ -0.02
CHD2-205ENST00000625662 BECN1Q14457 450 aa14.91□□□□□ -0.02
CHD2-205ENST00000625662 CCDC141Q6ZP82 1450 aa14.91□□□□□ -0.02
CHD2-205ENST00000625662 CCER2I3L3R5 266 aa14.9□□□□□ -0.02
CHD2-205ENST00000625662 GPATCH3Q96I76 525 aa14.9□□□□□ -0.02
CHD2-205ENST00000625662 SMG6Q86US8 1419 aaKnown RBP14.9□□□□□ -0.02
CHD2-205ENST00000625662 NLRP13Q86W25 1043 aa14.89□□□□□ -0.03
CHD2-205ENST00000625662 HMMRO75330 724 aa14.89□□□□□ -0.03
CHD2-205ENST00000625662 PIP4K2BP78356 416 aa14.89□□□□□ -0.03
CHD2-205ENST00000625662 SYTL4Q96C24 671 aaPredicted RBP14.88□□□□□ -0.03
CHD2-205ENST00000625662 NLRP2Q9NX02 1062 aa14.88□□□□□ -0.03
CHD2-205ENST00000625662 ANKRD30BQ9BXX2 1392 aa14.88□□□□□ -0.03
CHD2-205ENST00000625662 SUPT6HQ7KZ85 1726 aaKnown RBP14.88□□□□□ -0.03
CHD2-205ENST00000625662 ANP32EQ9BTT0 268 aa14.88□□□□□ -0.03
CHD2-205ENST00000625662 ZNF692Q9BU19 519 aaPredicted RBP14.88□□□□□ -0.03
CHD2-205ENST00000625662 HSP90B1P14625 803 aaKnown RBP14.87□□□□□ -0.03
CHD2-205ENST00000625662 NLRP6P59044 892 aa14.87□□□□□ -0.03
CHD2-205ENST00000625662 ISY1Q9ULR0 285 aaKnown RBP14.87□□□□□ -0.03
CHD2-205ENST00000625662 MCCP23508 829 aa14.87□□□□□ -0.03
CHD2-205ENST00000625662 ZRSR1Q15695 479 aaKnown RBP14.87□□□□□ -0.03
CHD2-205ENST00000625662 CHMP3Q9Y3E7 222 aa14.87□□□□□ -0.03
CHD2-205ENST00000625662 NEXNQ0ZGT2 675 aa14.86□□□□□ -0.03
CHD2-205ENST00000625662 ST20-MTHFSA0A0A6YYL1 179 aa14.86□□□□□ -0.03
CHD2-205ENST00000625662 NGEFQ8N5V2 710 aa14.85□□□□□ -0.03
CHD2-205ENST00000625662 FANCAO15360 1455 aa14.84□□□□□ -0.03
CHD2-205ENST00000625662 FRAT2O75474 233 aaPredicted RBP14.84□□□□□ -0.03
CHD2-205ENST00000625662 ABTB2Q8N961 1025 aa14.84□□□□□ -0.03
CHD2-205ENST00000625662 LRPPRCP42704 1394 aaKnown RBP14.84□□□□□ -0.03
CHD2-205ENST00000625662 DIAPH1O60610 1272 aaKnown RBP14.84□□□□□ -0.03
CHD2-205ENST00000625662 DDX58O95786 925 aaKnown RBP14.84□□□□□ -0.03
CHD2-205ENST00000625662 NUTM2BA6NNL0 878 aaPredicted RBP14.83□□□□□ -0.03
CHD2-205ENST00000625662 NUTM2EB1AL46 878 aaPredicted RBP14.83□□□□□ -0.03
CHD2-205ENST00000625662 NUTM2AQ8IVF1 878 aaPredicted RBP14.83□□□□□ -0.03
CHD2-205ENST00000625662 TOM1O60784 492 aa14.83□□□□□ -0.04
CHD2-205ENST00000625662 ANO8Q9HCE9 1232 aaPredicted RBP14.83□□□□□ -0.04
CHD2-205ENST00000625662 USP47Q96K76 1375 aa14.83□□□□□ -0.04
CHD2-205ENST00000625662 GOLGA6L22H0YM25 854 aa14.83□□□□□ -0.04
CHD2-205ENST00000625662 MIER1Q8N108 512 aa14.83□□□□□ -0.04
CHD2-205ENST00000625662 ARAP1Q96P48 1450 aa14.82□□□□□ -0.04
CHD2-205ENST00000625662 DDRGK1Q96HY6 314 aa14.81□□□□□ -0.04
CHD2-205ENST00000625662 ASXL2Q76L83 1435 aa14.81□□□□□ -0.04
CHD2-205ENST00000625662 PANK3Q9H999 370 aa14.81□□□□□ -0.04
CHD2-205ENST00000625662 ROCK1Q13464 1354 aa14.81□□□□□ -0.04
CHD2-205ENST00000625662 WDR62O43379 1518 aa14.81□□□□□ -0.04
CHD2-205ENST00000625662 ARHGEF11O15085 1522 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms