RNA–Protein interactions for RNA: ENST00000625364.1

PPA1-206, Transcript of pyrophosphatase (inorganic) 1, human

TSL 5 BASIC

Gene PPA1, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPA1-206	ENST00000625364	CHIC1	Q5VXU3	224 aa		23.48	■■□□□ 1.35
PPA1-206	ENST00000625364	MTUS2	Q5JR59	1369 aa		23.47	■■□□□ 1.35
PPA1-206	ENST00000625364	TIAM1	Q13009	1591 aa		23.46	■■□□□ 1.35
PPA1-206	ENST00000625364	PZP	P20742	1482 aa		23.45	■■□□□ 1.34
PPA1-206	ENST00000625364	MBD5	Q9P267	1494 aa		23.45	■■□□□ 1.34
PPA1-206	ENST00000625364	KDM5D	Q9BY66	1539 aa		23.44	■■□□□ 1.34
PPA1-206	ENST00000625364	RTEL1-TNFRSF6B	F6WH68	1400 aa		23.44	■■□□□ 1.34
PPA1-206	ENST00000625364	DHX29	Q7Z478	1369 aa	Known RBP	23.44	■■□□□ 1.34
PPA1-206	ENST00000625364	ZNF644	Q9H582	1327 aa	Predicted RBP	23.44	■■□□□ 1.34
PPA1-206	ENST00000625364	VWDE	Q8N2E2	1590 aa		23.44	■■□□□ 1.34
PPA1-206	ENST00000625364	FAM135A	Q9P2D6	1515 aa		23.43	■■□□□ 1.34
PPA1-206	ENST00000625364	FBXO31	Q5XUX0	539 aa	Predicted RBP	23.43	■■□□□ 1.34
PPA1-206	ENST00000625364	PHF23	Q9BUL5	403 aa	Predicted RBP	23.41	■■□□□ 1.34
PPA1-206	ENST00000625364	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	23.4	■■□□□ 1.34
PPA1-206	ENST00000625364	ANKLE2	Q86XL3	938 aa		23.4	■■□□□ 1.34
PPA1-206	ENST00000625364	KIF3B	O15066	747 aa		23.39	■■□□□ 1.33
PPA1-206	ENST00000625364	ALK	Q9UM73	1620 aa		23.39	■■□□□ 1.33
PPA1-206	ENST00000625364	EHBP1L1	Q8N3D4	1523 aa		23.38	■■□□□ 1.33
PPA1-206	ENST00000625364	DEPDC5	O75140	1603 aa		23.38	■■□□□ 1.33
PPA1-206	ENST00000625364	NPHP4	O75161	1426 aa	Predicted RBP	23.38	■■□□□ 1.33
PPA1-206	ENST00000625364	NLRP1	Q9C000	1473 aa		23.37	■■□□□ 1.33
PPA1-206	ENST00000625364	UGGT1	Q9NYU2	1555 aa		23.37	■■□□□ 1.33
PPA1-206	ENST00000625364	MED14	O60244	1454 aa		23.36	■■□□□ 1.33
PPA1-206	ENST00000625364	CCDC141	Q6ZP82	1450 aa		23.36	■■□□□ 1.33
PPA1-206	ENST00000625364	THEMIS	Q8N1K5	641 aa	Predicted RBP	23.35	■■□□□ 1.33
PPA1-206	ENST00000625364	IQGAP1	P46940	1657 aa		23.35	■■□□□ 1.33
PPA1-206	ENST00000625364	WASHC2C	Q9Y4E1	1318 aa		23.34	■■□□□ 1.33
PPA1-206	ENST00000625364	MIA2	Q96PC5	1412 aa		23.34	■■□□□ 1.33
PPA1-206	ENST00000625364	CEP162	Q5TB80	1403 aa		23.33	■■□□□ 1.32
PPA1-206	ENST00000625364	RNF17	Q9BXT8	1623 aa	Known RBP	23.3	■■□□□ 1.32
PPA1-206	ENST00000625364	STRCP1	A6NGW2	1772 aa		23.3	■■□□□ 1.32
PPA1-206	ENST00000625364	SYNM	O15061	1565 aa		23.3	■■□□□ 1.32
PPA1-206	ENST00000625364	CAMSAP2	Q08AD1	1489 aa		23.3	■■□□□ 1.32
PPA1-206	ENST00000625364	SENP3	Q9H4L4	574 aa	Predicted RBP	23.28	■■□□□ 1.32
PPA1-206	ENST00000625364	LRRC7	Q96NW7	1537 aa		23.27	■■□□□ 1.32
PPA1-206	ENST00000625364	RSPH4A	Q5TD94	716 aa		23.23	■■□□□ 1.31
PPA1-206	ENST00000625364	ZC3H13	Q5T200	1668 aa	Known RBP	23.22	■■□□□ 1.31
PPA1-206	ENST00000625364	NCOA2	Q15596	1464 aa		23.22	■■□□□ 1.31
PPA1-206	ENST00000625364	ARHGEF5	Q12774	1597 aa		23.22	■■□□□ 1.31
PPA1-206	ENST00000625364	ABCC3	O15438	1527 aa		23.21	■■□□□ 1.31
PPA1-206	ENST00000625364	ERVK-7	P63135	1459 aa		23.19	■■□□□ 1.3
PPA1-206	ENST00000625364	TSPY4	P0CV99	314 aa		23.16	■■□□□ 1.3
PPA1-206	ENST00000625364	TSPY10	P0CW01	314 aa		23.16	■■□□□ 1.3
PPA1-206	ENST00000625364	UBR1	Q8IWV7	1749 aa		23.16	■■□□□ 1.3
PPA1-206	ENST00000625364	CFAP65	Q6ZU64	1925 aa	Known RBP	23.14	■■□□□ 1.3
PPA1-206	ENST00000625364	SCAF11	Q99590	1463 aa	Known RBP	23.14	■■□□□ 1.29
PPA1-206	ENST00000625364	EIF2AK4	Q9P2K8	1649 aa	Known RBP	23.14	■■□□□ 1.29
PPA1-206	ENST00000625364	CEP152	O94986	1710 aa		23.12	■■□□□ 1.29
PPA1-206	ENST00000625364	RGS17	Q9UGC6	210 aa	Predicted RBP	23.12	■■□□□ 1.29
PPA1-206	ENST00000625364	MROH1	Q8NDA8	1641 aa		23.11	■■□□□ 1.29
PPA1-206	ENST00000625364	MAST1	Q9Y2H9	1570 aa		23.11	■■□□□ 1.29
PPA1-206	ENST00000625364	XIRP1	Q702N8	1843 aa	Known RBP	23.1	■■□□□ 1.29
PPA1-206	ENST00000625364	SLIT1	O75093	1534 aa		23.08	■■□□□ 1.28
PPA1-206	ENST00000625364	ARHGAP23	Q9P227	1491 aa		23.07	■■□□□ 1.28
PPA1-206	ENST00000625364	LTK	P29376	864 aa		23.04	■■□□□ 1.28
PPA1-206	ENST00000625364	TXNDC2	Q86VQ3	553 aa		23.04	■■□□□ 1.28
PPA1-206	ENST00000625364	FAM135B	Q49AJ0	1406 aa		23.01	■■□□□ 1.27
PPA1-206	ENST00000625364	EID1	Q9Y6B2	187 aa		23	■■□□□ 1.27
PPA1-206	ENST00000625364	DUOX2	Q9NRD8	1548 aa		22.99	■■□□□ 1.27
PPA1-206	ENST00000625364	ARHGAP31	Q2M1Z3	1444 aa		22.98	■■□□□ 1.27
PPA1-206	ENST00000625364	PRDM15	P57071	1507 aa	Predicted RBP	22.98	■■□□□ 1.27
PPA1-206	ENST00000625364	PIK3C2B	O00750	1634 aa		22.97	■■□□□ 1.27
PPA1-206	ENST00000625364	POTEA	Q6S8J7	498 aa		22.97	■■□□□ 1.27
PPA1-206	ENST00000625364	LRRC9	Q6ZRR7	1453 aa		22.97	■■□□□ 1.27
PPA1-206	ENST00000625364	TMEM94	Q12767	1356 aa		22.96	■■□□□ 1.27
PPA1-206	ENST00000625364	ROBO1	Q9Y6N7	1651 aa		22.96	■■□□□ 1.27
PPA1-206	ENST00000625364	TMEM2	Q9UHN6	1383 aa		22.95	■■□□□ 1.26
PPA1-206	ENST00000625364	MAP3K1	Q13233	1512 aa		22.92	■■□□□ 1.26
PPA1-206	ENST00000625364	MYOM3	Q5VTT5	1437 aa		22.91	■■□□□ 1.26
PPA1-206	ENST00000625364	STAG3	Q9UJ98	1225 aa		22.91	■■□□□ 1.26
PPA1-206	ENST00000625364	ERBIN	Q96RT1	1412 aa		22.91	■■□□□ 1.26
PPA1-206	ENST00000625364	KDM5A	P29375	1690 aa	Known RBP	22.9	■■□□□ 1.26
PPA1-206	ENST00000625364	KIF15	Q9NS87	1388 aa		22.9	■■□□□ 1.26
PPA1-206	ENST00000625364	EFCAB6	Q5THR3	1501 aa		22.9	■■□□□ 1.26
PPA1-206	ENST00000625364	SETD1A	O15047	1707 aa	Known RBP	22.9	■■□□□ 1.26
PPA1-206	ENST00000625364	KCNA6	P17658	529 aa		22.89	■■□□□ 1.25
PPA1-206	ENST00000625364	CROCC2	H7BZ55	1655 aa		22.87	■■□□□ 1.25
PPA1-206	ENST00000625364	PROSER2	Q86WR7	435 aa	Predicted RBP	22.86	■■□□□ 1.25
PPA1-206	ENST00000625364	NKTR	P30414	1462 aa	Known RBP	22.85	■■□□□ 1.25
PPA1-206	ENST00000625364	NWD1	Q149M9	1564 aa		22.85	■■□□□ 1.25
PPA1-206	ENST00000625364	VPS8	Q8N3P4	1428 aa		22.85	■■□□□ 1.25
PPA1-206	ENST00000625364	TET3	O43151	1660 aa		22.85	■■□□□ 1.25
PPA1-206	ENST00000625364	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	22.85	■■□□□ 1.25
PPA1-206	ENST00000625364	RBM33	Q96EV2	1170 aa	Known RBP	22.84	■■□□□ 1.25
PPA1-206	ENST00000625364	SLC26A8	Q96RN1	970 aa		22.84	■■□□□ 1.25
PPA1-206	ENST00000625364	PHLPP1	O60346	1717 aa		22.84	■■□□□ 1.25
PPA1-206	ENST00000625364	KANK1	Q14678	1352 aa		22.84	■■□□□ 1.25
PPA1-206	ENST00000625364	RRP7BP	Q9NSQ0	103 aa		22.82	■■□□□ 1.24
PPA1-206	ENST00000625364	MSH6	P52701	1360 aa		22.81	■■□□□ 1.24
PPA1-206	ENST00000625364	IDI1	Q13907	227 aa		22.81	■■□□□ 1.24
PPA1-206	ENST00000625364	KANK4	Q5T7N3	995 aa	Predicted RBP	22.81	■■□□□ 1.24
PPA1-206	ENST00000625364	ABCC5	O15440	1437 aa		22.81	■■□□□ 1.24
PPA1-206	ENST00000625364	JCAD	Q9P266	1359 aa		22.8	■■□□□ 1.24
PPA1-206	ENST00000625364	ADGRB3	O60242	1522 aa		22.8	■■□□□ 1.24
PPA1-206	ENST00000625364	LMTK2	Q8IWU2	1503 aa		22.8	■■□□□ 1.24
PPA1-206	ENST00000625364	PTPN23	Q9H3S7	1636 aa		22.76	■■□□□ 1.23
PPA1-206	ENST00000625364	NOS1	P29475	1434 aa		22.75	■■□□□ 1.23
PPA1-206	ENST00000625364	SLAIN2	Q9P270	581 aa		22.75	■■□□□ 1.23
PPA1-206	ENST00000625364	COL16A1	Q07092	1604 aa	Predicted RBP	22.75	■■□□□ 1.23
PPA1-206	ENST00000625364	DAPK1	P53355	1430 aa		22.74	■■□□□ 1.23

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms