RNA–Protein interactions for RNA: ENST00000624304.3

SMIM11B-205, Transcript of small integral membrane protein 11B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11B, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-205ENST00000624304 ZNF316A6NFI3 1004 aaPredicted RBP30.24■■■□□ 2.43
SMIM11B-205ENST00000624304 MPHOSPH9Q99550 1183 aa30.23■■■□□ 2.43
SMIM11B-205ENST00000624304 NUP155O75694 1391 aa30.23■■■□□ 2.43
SMIM11B-205ENST00000624304 KIF3BO15066 747 aa30.23■■■□□ 2.43
SMIM11B-205ENST00000624304 PZPP20742 1482 aa30.22■■■□□ 2.43
SMIM11B-205ENST00000624304 UNC13BO14795 1591 aa30.21■■■□□ 2.43
SMIM11B-205ENST00000624304 MAGI2Q86UL8 1455 aa30.21■■■□□ 2.43
SMIM11B-205ENST00000624304 FOXD1Q16676 465 aa30.2■■■□□ 2.42
SMIM11B-205ENST00000624304 SIGLEC1Q9BZZ2 1709 aa30.19■■■□□ 2.42
SMIM11B-205ENST00000624304 SLC4A1APQ9BWU0 796 aaKnown RBP30.18■■■□□ 2.42
SMIM11B-205ENST00000624304 EIF2AK4Q9P2K8 1649 aaKnown RBP30.18■■■□□ 2.42
SMIM11B-205ENST00000624304 ATP10AO60312 1499 aa30.15■■■□□ 2.42
SMIM11B-205ENST00000624304 DEPDC5O75140 1603 aa30.15■■■□□ 2.42
SMIM11B-205ENST00000624304 KDM5DQ9BY66 1539 aa30.14■■■□□ 2.42
SMIM11B-205ENST00000624304 MROH1Q8NDA8 1641 aa30.13■■■□□ 2.41
SMIM11B-205ENST00000624304 ARHGEF40Q8TER5 1519 aa30.13■■■□□ 2.41
SMIM11B-205ENST00000624304 FAM135AQ9P2D6 1515 aa30.12■■■□□ 2.41
SMIM11B-205ENST00000624304 IQGAP3Q86VI3 1631 aa30.1■■■□□ 2.41
SMIM11B-205ENST00000624304 GGT6Q6P531 493 aa30.1■■■□□ 2.41
SMIM11B-205ENST00000624304 BCORL1Q5H9F3 1711 aa30.09■■■□□ 2.41
SMIM11B-205ENST00000624304 PKD2Q13563 968 aa30.08■■■□□ 2.41
SMIM11B-205ENST00000624304 SIN3AQ96ST3 1273 aa30.08■■■□□ 2.41
SMIM11B-205ENST00000624304 RNF17Q9BXT8 1623 aaKnown RBP30.08■■■□□ 2.41
SMIM11B-205ENST00000624304 GTF3C3Q9Y5Q9 886 aa30.07■■■□□ 2.4
SMIM11B-205ENST00000624304 PRDM15P57071 1507 aaPredicted RBP30.05■■■□□ 2.4
SMIM11B-205ENST00000624304 CEP152O94986 1710 aa30.04■■■□□ 2.4
SMIM11B-205ENST00000624304 REREQ9P2R6 1566 aa30.03■■■□□ 2.4
SMIM11B-205ENST00000624304 CLSPNQ9HAW4 1339 aa30.03■■■□□ 2.4
SMIM11B-205ENST00000624304 VWDEQ8N2E2 1590 aa30.02■■■□□ 2.4
SMIM11B-205ENST00000624304 CFAP65Q6ZU64 1925 aaKnown RBP30■■■□□ 2.39
SMIM11B-205ENST00000624304 KANK1Q14678 1352 aa29.96■■■□□ 2.39
SMIM11B-205ENST00000624304 MLECQ14165 292 aa29.96■■■□□ 2.39
SMIM11B-205ENST00000624304 E9PCH4 1651 aa29.96■■■□□ 2.39
SMIM11B-205ENST00000624304 ANKRD30BQ9BXX2 1392 aa29.96■■■□□ 2.39
SMIM11B-205ENST00000624304 AGLP35573 1532 aa29.96■■■□□ 2.39
SMIM11B-205ENST00000624304 TET3O43151 1660 aa29.93■■■□□ 2.38
SMIM11B-205ENST00000624304 ARID4BQ4LE39 1312 aaPredicted RBP29.91■■■□□ 2.38
SMIM11B-205ENST00000624304 WASHC2CQ9Y4E1 1318 aa29.91■■■□□ 2.38
SMIM11B-205ENST00000624304 ABCC3O15438 1527 aa29.89■■■□□ 2.38
SMIM11B-205ENST00000624304 LMTK2Q8IWU2 1503 aa29.86■■■□□ 2.37
SMIM11B-205ENST00000624304 PLA2R1Q13018 1463 aa29.85■■■□□ 2.37
SMIM11B-205ENST00000624304 EFCAB6Q5THR3 1501 aa29.84■■■□□ 2.37
SMIM11B-205ENST00000624304 CAMSAP1Q5T5Y3 1602 aa29.84■■■□□ 2.37
SMIM11B-205ENST00000624304 CLTCQ00610 1675 aaKnown RBP29.82■■■□□ 2.36
SMIM11B-205ENST00000624304 ZC3H13Q5T200 1668 aaKnown RBP29.8■■■□□ 2.36
SMIM11B-205ENST00000624304 SPHKAPQ2M3C7 1700 aa29.79■■■□□ 2.36
SMIM11B-205ENST00000624304 NPATQ14207 1427 aa29.79■■■□□ 2.36
SMIM11B-205ENST00000624304 MYT1Q01538 1121 aa29.78■■■□□ 2.36
SMIM11B-205ENST00000624304 RPRD2Q5VT52 1461 aaKnown RBP29.75■■■□□ 2.35
SMIM11B-205ENST00000624304 PTPRTO14522 1441 aa29.72■■■□□ 2.35
SMIM11B-205ENST00000624304 PPP6R1Q9UPN7 881 aa29.71■■■□□ 2.35
SMIM11B-205ENST00000624304 UGGT1Q9NYU2 1555 aa29.69■■■□□ 2.34
SMIM11B-205ENST00000624304 MIER1Q8N108 512 aa29.69■■■□□ 2.34
SMIM11B-205ENST00000624304 TONSLQ96HA7 1378 aa29.69■■■□□ 2.34
SMIM11B-205ENST00000624304 CCDC144AA2RUR9 1427 aa29.68■■■□□ 2.34
SMIM11B-205ENST00000624304 TRPM2O94759 1503 aa29.68■■■□□ 2.34
SMIM11B-205ENST00000624304 CLTCL1P53675 1640 aa29.68■■■□□ 2.34
SMIM11B-205ENST00000624304 FBXO31Q5XUX0 539 aaPredicted RBP29.68■■■□□ 2.34
SMIM11B-205ENST00000624304 ARHGAP31Q2M1Z3 1444 aa29.67■■■□□ 2.34
SMIM11B-205ENST00000624304 FER1L4A9Z1Z3 1794 aa29.65■■■□□ 2.34
SMIM11B-205ENST00000624304 PREX1Q8TCU6 1659 aa29.65■■■□□ 2.34
SMIM11B-205ENST00000624304 L3MBTL2Q969R5 705 aa29.64■■■□□ 2.34
SMIM11B-205ENST00000624304 ESF1Q9H501 851 aaKnown RBP29.64■■■□□ 2.34
SMIM11B-205ENST00000624304 ZMYM3Q14202 1370 aa29.62■■■□□ 2.33
SMIM11B-205ENST00000624304 SYNMO15061 1565 aa29.62■■■□□ 2.33
SMIM11B-205ENST00000624304 NOS1P29475 1434 aa29.61■■■□□ 2.33
SMIM11B-205ENST00000624304 TIMELESSQ9UNS1 1208 aa29.59■■■□□ 2.33
SMIM11B-205ENST00000624304 RGL3Q3MIN7 710 aa29.59■■■□□ 2.33
SMIM11B-205ENST00000624304 PPP1R15AO75807 674 aaPredicted RBP29.57■■■□□ 2.32
SMIM11B-205ENST00000624304 CEBPAP49715 358 aaPredicted RBP29.57■■■□□ 2.32
SMIM11B-205ENST00000624304 KIF1BO60333 1816 aa29.56■■■□□ 2.32
SMIM11B-205ENST00000624304 CNTLNQ9NXG0 1405 aa29.56■■■□□ 2.32
SMIM11B-205ENST00000624304 MADDQ8WXG6 1647 aa29.55■■■□□ 2.32
SMIM11B-205ENST00000624304 PLPPR3Q6T4P5 718 aa29.55■■■□□ 2.32
SMIM11B-205ENST00000624304 MROH2AA6NES4 1674 aa29.55■■■□□ 2.32
SMIM11B-205ENST00000624304 ERVK-7P63135 1459 aa29.54■■■□□ 2.32
SMIM11B-205ENST00000624304 YTHDC1Q96MU7 727 aaKnown RBP29.53■■■□□ 2.32
SMIM11B-205ENST00000624304 C3P01024 1663 aa29.53■■■□□ 2.32
SMIM11B-205ENST00000624304 PIK3C2BO00750 1634 aa29.52■■■□□ 2.32
SMIM11B-205ENST00000624304 ADAMTSL3P82987 1691 aa29.51■■■□□ 2.32
SMIM11B-205ENST00000624304 RIMS1Q86UR5 1692 aaKnown RBP29.51■■■□□ 2.32
SMIM11B-205ENST00000624304 SPATA31E1Q6ZUB1 1445 aa29.51■■■□□ 2.31
SMIM11B-205ENST00000624304 IDI1Q13907 227 aa29.5■■■□□ 2.31
SMIM11B-205ENST00000624304 MYO5BQ9ULV0 1848 aa29.49■■■□□ 2.31
SMIM11B-205ENST00000624304 SPATA31D1Q6ZQQ2 1576 aa29.49■■■□□ 2.31
SMIM11B-205ENST00000624304 KDM2AQ9Y2K7 1162 aa29.48■■■□□ 2.31
SMIM11B-205ENST00000624304 CHGAP10645 457 aaKnown RBP29.47■■■□□ 2.31
SMIM11B-205ENST00000624304 DCAF11Q8TEB1 546 aa29.47■■■□□ 2.31
SMIM11B-205ENST00000624304 NBPF8Q3BBV2 869 aa29.45■■■□□ 2.31
SMIM11B-205ENST00000624304 SLC52A1Q9NWF4 448 aa29.41■■■□□ 2.3
SMIM11B-205ENST00000624304 ZNF326Q5BKZ1 582 aaKnown RBP29.4■■■□□ 2.3
SMIM11B-205ENST00000624304 ADGRB3O60242 1522 aa29.4■■■□□ 2.3
SMIM11B-205ENST00000624304 TMEM131LA2VDJ0 1609 aa29.37■■■□□ 2.29
SMIM11B-205ENST00000624304 TNRQ92752 1358 aa29.36■■■□□ 2.29
SMIM11B-205ENST00000624304 NEURL4Q96JN8 1562 aa29.35■■■□□ 2.29
SMIM11B-205ENST00000624304 IFT172Q9UG01 1749 aa29.34■■■□□ 2.29
SMIM11B-205ENST00000624304 PPLO60437 1756 aa29.31■■■□□ 2.28
SMIM11B-205ENST00000624304 NUTM2DQ5VT03 806 aaPredicted RBP29.3■■■□□ 2.28
SMIM11B-205ENST00000624304 UHRF1BP1Q6BDS2 1440 aa29.28■■■□□ 2.28
SMIM11B-205ENST00000624304 STAG3Q9UJ98 1225 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms