RNA–Protein interactions for RNA: ENST00000624069.3

RPL13A-214, Transcript of ribosomal protein L13a, humanhuman

TSL 1 (best)

Gene RPL13A, Length 1,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-214ENST00000624069 DNMT1P26358 1616 aaKnown RBP23.61■■□□□ 1.37
RPL13A-214ENST00000624069 MAP3K1Q13233 1512 aa23.6■■□□□ 1.37
RPL13A-214ENST00000624069 FBXO31Q5XUX0 539 aaPredicted RBP23.6■■□□□ 1.37
RPL13A-214ENST00000624069 PLEKHH2Q8IVE3 1493 aa23.59■■□□□ 1.37
RPL13A-214ENST00000624069 INO80Q9ULG1 1556 aaPredicted RBP23.58■■□□□ 1.37
RPL13A-214ENST00000624069 ANKLE2Q86XL3 938 aa23.57■■□□□ 1.36
RPL13A-214ENST00000624069 TNRQ92752 1358 aa23.56■■□□□ 1.36
RPL13A-214ENST00000624069 APLP2Q06481 763 aa23.56■■□□□ 1.36
RPL13A-214ENST00000624069 NEURL4Q96JN8 1562 aa23.56■■□□□ 1.36
RPL13A-214ENST00000624069 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.53■■□□□ 1.36
RPL13A-214ENST00000624069 ALKQ9UM73 1620 aa23.53■■□□□ 1.36
RPL13A-214ENST00000624069 LRRC9Q6ZRR7 1453 aa23.53■■□□□ 1.36
RPL13A-214ENST00000624069 CCNB3Q8WWL7 1395 aa23.52■■□□□ 1.36
RPL13A-214ENST00000624069 THEMISQ8N1K5 641 aaPredicted RBP23.52■■□□□ 1.36
RPL13A-214ENST00000624069 ZNF644Q9H582 1327 aaPredicted RBP23.52■■□□□ 1.36
RPL13A-214ENST00000624069 VWDEQ8N2E2 1590 aa23.51■■□□□ 1.35
RPL13A-214ENST00000624069 DHX29Q7Z478 1369 aaKnown RBP23.51■■□□□ 1.35
RPL13A-214ENST00000624069 KIF3BO15066 747 aa23.47■■□□□ 1.35
RPL13A-214ENST00000624069 SENP3Q9H4L4 574 aaPredicted RBP23.47■■□□□ 1.35
RPL13A-214ENST00000624069 RGS17Q9UGC6 210 aaPredicted RBP23.47■■□□□ 1.35
RPL13A-214ENST00000624069 RTEL1-TNFRSF6BF6WH68 1400 aa23.47■■□□□ 1.35
RPL13A-214ENST00000624069 NPHP4O75161 1426 aaPredicted RBP23.47■■□□□ 1.35
RPL13A-214ENST00000624069 MED14O60244 1454 aa23.47■■□□□ 1.35
RPL13A-214ENST00000624069 MBD5Q9P267 1494 aa23.47■■□□□ 1.35
RPL13A-214ENST00000624069 PZPP20742 1482 aa23.46■■□□□ 1.35
RPL13A-214ENST00000624069 NCOA2Q15596 1464 aa23.46■■□□□ 1.35
RPL13A-214ENST00000624069 MIA2Q96PC5 1412 aa23.45■■□□□ 1.34
RPL13A-214ENST00000624069 POLR1AO95602 1720 aaPredicted RBP23.45■■□□□ 1.34
RPL13A-214ENST00000624069 ADGBQ8N7X0 1667 aa23.44■■□□□ 1.34
RPL13A-214ENST00000624069 WASHC2CQ9Y4E1 1318 aa23.43■■□□□ 1.34
RPL13A-214ENST00000624069 KANK4Q5T7N3 995 aaPredicted RBP23.43■■□□□ 1.34
RPL13A-214ENST00000624069 LRRC7Q96NW7 1537 aa23.4■■□□□ 1.34
RPL13A-214ENST00000624069 NLRP1Q9C000 1473 aa23.4■■□□□ 1.34
RPL13A-214ENST00000624069 FAM135AQ9P2D6 1515 aa23.38■■□□□ 1.33
RPL13A-214ENST00000624069 UGGT1Q9NYU2 1555 aa23.38■■□□□ 1.33
RPL13A-214ENST00000624069 KDM5DQ9BY66 1539 aa23.38■■□□□ 1.33
RPL13A-214ENST00000624069 DEPDC5O75140 1603 aa23.37■■□□□ 1.33
RPL13A-214ENST00000624069 RSPH4AQ5TD94 716 aa23.3■■□□□ 1.32
RPL13A-214ENST00000624069 STRCP1A6NGW2 1772 aa23.29■■□□□ 1.32
RPL13A-214ENST00000624069 MYOM3Q5VTT5 1437 aa23.29■■□□□ 1.32
RPL13A-214ENST00000624069 POTEAQ6S8J7 498 aa23.28■■□□□ 1.32
RPL13A-214ENST00000624069 IQGAP1P46940 1657 aa23.28■■□□□ 1.32
RPL13A-214ENST00000624069 RNF17Q9BXT8 1623 aaKnown RBP23.26■■□□□ 1.31
RPL13A-214ENST00000624069 CCDC141Q6ZP82 1450 aa23.26■■□□□ 1.31
RPL13A-214ENST00000624069 CAMSAP2Q08AD1 1489 aa23.24■■□□□ 1.31
RPL13A-214ENST00000624069 SYNMO15061 1565 aa23.23■■□□□ 1.31
RPL13A-214ENST00000624069 LTKP29376 864 aa23.22■■□□□ 1.31
RPL13A-214ENST00000624069 FAM135BQ49AJ0 1406 aa23.21■■□□□ 1.31
RPL13A-214ENST00000624069 TSPY4P0CV99 314 aa23.19■■□□□ 1.3
RPL13A-214ENST00000624069 TSPY10P0CW01 314 aa23.19■■□□□ 1.3
RPL13A-214ENST00000624069 TXNDC2Q86VQ3 553 aa23.19■■□□□ 1.3
RPL13A-214ENST00000624069 ERVK-7P63135 1459 aa23.18■■□□□ 1.3
RPL13A-214ENST00000624069 FGD6Q6ZV73 1430 aa23.17■■□□□ 1.3
RPL13A-214ENST00000624069 ABCC3O15438 1527 aa23.17■■□□□ 1.3
RPL13A-214ENST00000624069 SCAF11Q99590 1463 aaKnown RBP23.17■■□□□ 1.3
RPL13A-214ENST00000624069 ZC3H13Q5T200 1668 aaKnown RBP23.16■■□□□ 1.3
RPL13A-214ENST00000624069 PTPN23Q9H3S7 1636 aa23.15■■□□□ 1.3
RPL13A-214ENST00000624069 PPARGC1BQ86YN6 1023 aaKnown RBP23.15■■□□□ 1.3
RPL13A-214ENST00000624069 ARHGAP23Q9P227 1491 aa23.13■■□□□ 1.29
RPL13A-214ENST00000624069 ARHGEF5Q12774 1597 aa23.13■■□□□ 1.29
RPL13A-214ENST00000624069 SLIT1O75093 1534 aa23.09■■□□□ 1.29
RPL13A-214ENST00000624069 EID1Q9Y6B2 187 aa23.09■■□□□ 1.29
RPL13A-214ENST00000624069 TMEM94Q12767 1356 aa23.09■■□□□ 1.29
RPL13A-214ENST00000624069 UBR1Q8IWV7 1749 aa23.07■■□□□ 1.28
RPL13A-214ENST00000624069 XIRP1Q702N8 1843 aaKnown RBP23.06■■□□□ 1.28
RPL13A-214ENST00000624069 KCNA6P17658 529 aa23.06■■□□□ 1.28
RPL13A-214ENST00000624069 RBM33Q96EV2 1170 aaKnown RBP23.03■■□□□ 1.28
RPL13A-214ENST00000624069 TMEM2Q9UHN6 1383 aa23.02■■□□□ 1.28
RPL13A-214ENST00000624069 MROH1Q8NDA8 1641 aa23.02■■□□□ 1.28
RPL13A-214ENST00000624069 PROSER2Q86WR7 435 aaPredicted RBP23.02■■□□□ 1.28
RPL13A-214ENST00000624069 CROCC2H7BZ55 1655 aa23.02■■□□□ 1.28
RPL13A-214ENST00000624069 ARHGAP31Q2M1Z3 1444 aa23.01■■□□□ 1.27
RPL13A-214ENST00000624069 FAM50AQ14320 339 aaKnown RBP23.01■■□□□ 1.27
RPL13A-214ENST00000624069 MAST1Q9Y2H9 1570 aa23.01■■□□□ 1.27
RPL13A-214ENST00000624069 DAPK1P53355 1430 aa22.99■■□□□ 1.27
RPL13A-214ENST00000624069 SLC26A8Q96RN1 970 aa22.98■■□□□ 1.27
RPL13A-214ENST00000624069 ABCC5O15440 1437 aa22.97■■□□□ 1.27
RPL13A-214ENST00000624069 EIF2AK4Q9P2K8 1649 aaKnown RBP22.97■■□□□ 1.27
RPL13A-214ENST00000624069 ROBO1Q9Y6N7 1651 aa22.97■■□□□ 1.27
RPL13A-214ENST00000624069 UPF1Q92900 1129 aaKnown RBP eCLIP22.96■■□□□ 1.274e-13■□□□□ 9.4
RPL13A-214ENST00000624069 SLAIN2Q9P270 581 aa22.96■■□□□ 1.27
RPL13A-214ENST00000624069 STAG3Q9UJ98 1225 aa22.96■■□□□ 1.27
RPL13A-214ENST00000624069 CFAP65Q6ZU64 1925 aaKnown RBP22.95■■□□□ 1.26
RPL13A-214ENST00000624069 JCADQ9P266 1359 aa22.95■■□□□ 1.26
RPL13A-214ENST00000624069 RRBP1Q9P2E9 1410 aaKnown RBP22.94■■□□□ 1.26
RPL13A-214ENST00000624069 IDI1Q13907 227 aa22.94■■□□□ 1.26
RPL13A-214ENST00000624069 SETD1AO15047 1707 aaKnown RBP22.92■■□□□ 1.26
RPL13A-214ENST00000624069 CEP152O94986 1710 aa22.92■■□□□ 1.26
RPL13A-214ENST00000624069 PRDM15P57071 1507 aaPredicted RBP22.92■■□□□ 1.26
RPL13A-214ENST00000624069 TET3O43151 1660 aa22.9■■□□□ 1.26
RPL13A-214ENST00000624069 DUOX2Q9NRD8 1548 aa22.9■■□□□ 1.26
RPL13A-214ENST00000624069 MSH6P52701 1360 aa22.89■■□□□ 1.26
RPL13A-214ENST00000624069 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.89■■□□□ 1.252e-18■□□□□ 8.9
RPL13A-214ENST00000624069 PIK3C2BO00750 1634 aa22.89■■□□□ 1.25
RPL13A-214ENST00000624069 EFCAB6Q5THR3 1501 aa22.87■■□□□ 1.25
RPL13A-214ENST00000624069 NKTRP30414 1462 aaKnown RBP22.86■■□□□ 1.25
RPL13A-214ENST00000624069 ZNF772Q68DY9 489 aaPredicted RBP22.86■■□□□ 1.25
RPL13A-214ENST00000624069 TRIM52Q96A61 297 aa22.85■■□□□ 1.25
RPL13A-214ENST00000624069 RRP7BPQ9NSQ0 103 aa22.85■■□□□ 1.25
RPL13A-214ENST00000624069 KIF15Q9NS87 1388 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms