RNA–Protein interactions for RNA: ENST00000623478.1

PCDHB4-202, Transcript of protocadherin beta 4, humanhuman

TSL 1 (best)

Gene PCDHB4, Length 1,206 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-202ENST00000623478 RNF17Q9BXT8 1623 aaKnown RBP32.51■■■□□ 2.8
PCDHB4-202ENST00000623478 EIF2AK4Q9P2K8 1649 aaKnown RBP32.51■■■□□ 2.79
PCDHB4-202ENST00000623478 FAM135AQ9P2D6 1515 aa32.51■■■□□ 2.79
PCDHB4-202ENST00000623478 MYO3AQ8NEV4 1616 aa32.5■■■□□ 2.79
PCDHB4-202ENST00000623478 DUOX2Q9NRD8 1548 aa32.5■■■□□ 2.79
PCDHB4-202ENST00000623478 KIF15Q9NS87 1388 aa32.49■■■□□ 2.79
PCDHB4-202ENST00000623478 STRCQ7RTU9 1775 aa32.49■■■□□ 2.79
PCDHB4-202ENST00000623478 WASHC2CQ9Y4E1 1318 aa32.48■■■□□ 2.79
PCDHB4-202ENST00000623478 MROH1Q8NDA8 1641 aa32.45■■■□□ 2.79
PCDHB4-202ENST00000623478 RRP7BPQ9NSQ0 103 aa32.45■■■□□ 2.79
PCDHB4-202ENST00000623478 PZPP20742 1482 aa32.42■■■□□ 2.78
PCDHB4-202ENST00000623478 FAM50AQ14320 339 aaKnown RBP32.42■■■□□ 2.78
PCDHB4-202ENST00000623478 ILDR1Q86SU0 546 aaPredicted RBP32.42■■■□□ 2.78
PCDHB4-202ENST00000623478 CHIC2Q9UKJ5 165 aa32.42■■■□□ 2.78
PCDHB4-202ENST00000623478 ZNF142P52746 1687 aaPredicted RBP32.42■■■□□ 2.78
PCDHB4-202ENST00000623478 ABCC3O15438 1527 aa32.41■■■□□ 2.78
PCDHB4-202ENST00000623478 FBXO31Q5XUX0 539 aaPredicted RBP32.41■■■□□ 2.78
PCDHB4-202ENST00000623478 CEP170BQ9Y4F5 1589 aaPredicted RBP32.41■■■□□ 2.78
PCDHB4-202ENST00000623478 ERBINQ96RT1 1412 aa32.39■■■□□ 2.78
PCDHB4-202ENST00000623478 ZC3H13Q5T200 1668 aaKnown RBP32.38■■■□□ 2.77
PCDHB4-202ENST00000623478 CAMSAP1Q5T5Y3 1602 aa32.38■■■□□ 2.77
PCDHB4-202ENST00000623478 NCOA1Q15788 1441 aa32.38■■■□□ 2.77
PCDHB4-202ENST00000623478 PPARGC1BQ86YN6 1023 aaKnown RBP32.38■■■□□ 2.77
PCDHB4-202ENST00000623478 ANKRD30AQ9BXX3 1397 aa32.36■■■□□ 2.77
PCDHB4-202ENST00000623478 TNRQ92752 1358 aa32.34■■■□□ 2.77
PCDHB4-202ENST00000623478 CEP152O94986 1710 aa32.34■■■□□ 2.77
PCDHB4-202ENST00000623478 PRDM15P57071 1507 aaPredicted RBP32.32■■■□□ 2.76
PCDHB4-202ENST00000623478 ADGRL2O95490 1459 aa32.32■■■□□ 2.76
PCDHB4-202ENST00000623478 DMRT2Q9Y5R5 561 aa32.32■■■□□ 2.76
PCDHB4-202ENST00000623478 A2ML1A8K2U0 1454 aa32.3■■■□□ 2.76
PCDHB4-202ENST00000623478 DEPDC5O75140 1603 aa32.29■■■□□ 2.76
PCDHB4-202ENST00000623478 PTPRTO14522 1441 aa32.27■■■□□ 2.76
PCDHB4-202ENST00000623478 PLA2R1Q13018 1463 aa32.25■■■□□ 2.75
PCDHB4-202ENST00000623478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.24■■■□□ 2.75
PCDHB4-202ENST00000623478 NCKAP5LQ9HCH0 1330 aa32.24■■■□□ 2.75
PCDHB4-202ENST00000623478 SPATA31D1Q6ZQQ2 1576 aa32.23■■■□□ 2.75
PCDHB4-202ENST00000623478 ERVK-7P63135 1459 aa32.22■■■□□ 2.75
PCDHB4-202ENST00000623478 NLRP1Q9C000 1473 aa32.19■■■□□ 2.74
PCDHB4-202ENST00000623478 FBXO41Q8TF61 875 aa32.17■■■□□ 2.74
PCDHB4-202ENST00000623478 KANK1Q14678 1352 aa32.16■■■□□ 2.74
PCDHB4-202ENST00000623478 VWDEQ8N2E2 1590 aa32.15■■■□□ 2.74
PCDHB4-202ENST00000623478 CERKQ8TCT0 537 aa32.15■■■□□ 2.74
PCDHB4-202ENST00000623478 ANKRD50Q9ULJ7 1429 aa32.15■■■□□ 2.74
PCDHB4-202ENST00000623478 PKD2Q13563 968 aa32.14■■■□□ 2.74
PCDHB4-202ENST00000623478 ARHGAP31Q2M1Z3 1444 aa32.14■■■□□ 2.74
PCDHB4-202ENST00000623478 UGGT1Q9NYU2 1555 aa32.13■■■□□ 2.73
PCDHB4-202ENST00000623478 CFAP65Q6ZU64 1925 aaKnown RBP32.12■■■□□ 2.73
PCDHB4-202ENST00000623478 LMTK2Q8IWU2 1503 aa32.11■■■□□ 2.73
PCDHB4-202ENST00000623478 ITGAEP38570 1179 aa32.1■■■□□ 2.73
PCDHB4-202ENST00000623478 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.09■■■□□ 2.73
PCDHB4-202ENST00000623478 POLR1AO95602 1720 aaPredicted RBP32.08■■■□□ 2.73
PCDHB4-202ENST00000623478 ROCK1Q13464 1354 aa32.07■■■□□ 2.73
PCDHB4-202ENST00000623478 NEURL4Q96JN8 1562 aa32.07■■■□□ 2.72
PCDHB4-202ENST00000623478 LTBP4Q8N2S1 1624 aa32.06■■■□□ 2.72
PCDHB4-202ENST00000623478 THEMISQ8N1K5 641 aaPredicted RBP32.05■■■□□ 2.72
PCDHB4-202ENST00000623478 EFCAB6Q5THR3 1501 aa32.05■■■□□ 2.72
PCDHB4-202ENST00000623478 RRBP1Q9P2E9 1410 aaKnown RBP32.01■■■□□ 2.72
PCDHB4-202ENST00000623478 UBR1Q8IWV7 1749 aa32■■■□□ 2.71
PCDHB4-202ENST00000623478 UNC13BO14795 1591 aa32■■■□□ 2.71
PCDHB4-202ENST00000623478 ZNF335Q9H4Z2 1342 aaPredicted RBP32■■■□□ 2.71
PCDHB4-202ENST00000623478 ANKLE2Q86XL3 938 aa31.98■■■□□ 2.71
PCDHB4-202ENST00000623478 SYNMO15061 1565 aa31.95■■■□□ 2.71
PCDHB4-202ENST00000623478 PIK3C2BO00750 1634 aa31.94■■■□□ 2.7
PCDHB4-202ENST00000623478 TET3O43151 1660 aa31.93■■■□□ 2.7
PCDHB4-202ENST00000623478 NOS1P29475 1434 aa31.92■■■□□ 2.7
PCDHB4-202ENST00000623478 NPHP4O75161 1426 aaPredicted RBP31.91■■■□□ 2.7
PCDHB4-202ENST00000623478 MED14O60244 1454 aa31.91■■■□□ 2.7
PCDHB4-202ENST00000623478 RPRD2Q5VT52 1461 aaKnown RBP31.89■■■□□ 2.7
PCDHB4-202ENST00000623478 IQGAP1P46940 1657 aa31.87■■■□□ 2.69
PCDHB4-202ENST00000623478 GCC2Q8IWJ2 1684 aa31.87■■■□□ 2.69
PCDHB4-202ENST00000623478 IQGAP3Q86VI3 1631 aa31.86■■■□□ 2.69
PCDHB4-202ENST00000623478 IDI1Q13907 227 aa31.86■■■□□ 2.69
PCDHB4-202ENST00000623478 SLIT1O75093 1534 aa31.85■■■□□ 2.69
PCDHB4-202ENST00000623478 ARHGAP23Q9P227 1491 aa31.85■■■□□ 2.69
PCDHB4-202ENST00000623478 IQSEC2Q5JU85 1478 aa31.84■■■□□ 2.69
PCDHB4-202ENST00000623478 SCAF11Q99590 1463 aaKnown RBP31.84■■■□□ 2.69
PCDHB4-202ENST00000623478 KDM5AP29375 1690 aaKnown RBP31.82■■■□□ 2.68
PCDHB4-202ENST00000623478 NUP155O75694 1391 aa31.81■■■□□ 2.68
PCDHB4-202ENST00000623478 E9PCH4 1651 aa31.81■■■□□ 2.68
PCDHB4-202ENST00000623478 STAG3Q9UJ98 1225 aa31.81■■■□□ 2.68
PCDHB4-202ENST00000623478 LTKP29376 864 aa31.8■■■□□ 2.68
PCDHB4-202ENST00000623478 ADGRB3O60242 1522 aa31.8■■■□□ 2.68
PCDHB4-202ENST00000623478 TMEM2Q9UHN6 1383 aa31.79■■■□□ 2.68
PCDHB4-202ENST00000623478 TXNDC2Q86VQ3 553 aa31.78■■■□□ 2.68
PCDHB4-202ENST00000623478 SLC52A1Q9NWF4 448 aa31.76■■■□□ 2.67
PCDHB4-202ENST00000623478 NAIPQ13075 1403 aa31.75■■■□□ 2.67
PCDHB4-202ENST00000623478 EID1Q9Y6B2 187 aa31.73■■■□□ 2.67
PCDHB4-202ENST00000623478 CPS1P31327 1500 aa31.73■■■□□ 2.67
PCDHB4-202ENST00000623478 STRCP1A6NGW2 1772 aa31.67■■■□□ 2.66
PCDHB4-202ENST00000623478 MYO5BQ9ULV0 1848 aa31.67■■■□□ 2.66
PCDHB4-202ENST00000623478 HFM1A2PYH4 1435 aa31.66■■■□□ 2.66
PCDHB4-202ENST00000623478 TMEM131LA2VDJ0 1609 aa31.66■■■□□ 2.66
PCDHB4-202ENST00000623478 UBAP1LF5GYI3 381 aa31.62■■■□□ 2.65
PCDHB4-202ENST00000623478 ZFYVE9O95405 1425 aa31.6■■■□□ 2.65
PCDHB4-202ENST00000623478 CHGAP10645 457 aaKnown RBP31.58■■■□□ 2.65
PCDHB4-202ENST00000623478 SPHKAPQ2M3C7 1700 aa31.58■■■□□ 2.65
PCDHB4-202ENST00000623478 RIMS2Q9UQ26 1411 aa31.57■■■□□ 2.64
PCDHB4-202ENST00000623478 LRRC7Q96NW7 1537 aa31.56■■■□□ 2.64
PCDHB4-202ENST00000623478 SENP3Q9H4L4 574 aaPredicted RBP31.54■■■□□ 2.64
PCDHB4-202ENST00000623478 SLC26A8Q96RN1 970 aa31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms