RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 GPATCH8Q9UKJ3 1502 aaKnown RBP24.26■■□□□ 1.47
SNX12-206ENST00000622259 POTEAQ6S8J7 498 aa24.26■■□□□ 1.47
SNX12-206ENST00000622259 ANKLE2Q86XL3 938 aa24.26■■□□□ 1.47
SNX12-206ENST00000622259 NPHP4O75161 1426 aaPredicted RBP24.25■■□□□ 1.47
SNX12-206ENST00000622259 MED14O60244 1454 aa24.24■■□□□ 1.47
SNX12-206ENST00000622259 RNF17Q9BXT8 1623 aaKnown RBP24.21■■□□□ 1.47
SNX12-206ENST00000622259 CCDC18Q5T9S5 1454 aa24.21■■□□□ 1.47
SNX12-206ENST00000622259 KIAA1107Q9UPP5 1409 aa24.21■■□□□ 1.47
SNX12-206ENST00000622259 ADGBQ8N7X0 1667 aa24.19■■□□□ 1.46
SNX12-206ENST00000622259 CASKIN1Q8WXD9 1431 aa24.18■■□□□ 1.46
SNX12-206ENST00000622259 DEPDC5O75140 1603 aa24.18■■□□□ 1.46
SNX12-206ENST00000622259 THEMISQ8N1K5 641 aaPredicted RBP24.17■■□□□ 1.46
SNX12-206ENST00000622259 PZPP20742 1482 aa24.17■■□□□ 1.46
SNX12-206ENST00000622259 IQGAP1P46940 1657 aa24.17■■□□□ 1.46
SNX12-206ENST00000622259 UGGT1Q9NYU2 1555 aa24.15■■□□□ 1.46
SNX12-206ENST00000622259 PLEKHH2Q8IVE3 1493 aa24.14■■□□□ 1.46
SNX12-206ENST00000622259 SYNMO15061 1565 aa24.14■■□□□ 1.45
SNX12-206ENST00000622259 SETD1AO15047 1707 aaKnown RBP24.13■■□□□ 1.45
SNX12-206ENST00000622259 MIA2Q96PC5 1412 aa24.13■■□□□ 1.45
SNX12-206ENST00000622259 CFDP1Q9UEE9 299 aaPredicted RBP24.13■■□□□ 1.45
SNX12-206ENST00000622259 FAM135AQ9P2D6 1515 aa24.11■■□□□ 1.45
SNX12-206ENST00000622259 DHX29Q7Z478 1369 aaKnown RBP24.1■■□□□ 1.45
SNX12-206ENST00000622259 NLRP1Q9C000 1473 aa24.1■■□□□ 1.45
SNX12-206ENST00000622259 KDM5DQ9BY66 1539 aa24.1■■□□□ 1.45
SNX12-206ENST00000622259 ZNF644Q9H582 1327 aaPredicted RBP24.1■■□□□ 1.45
SNX12-206ENST00000622259 KIF3BO15066 747 aa24.08■■□□□ 1.45
SNX12-206ENST00000622259 XIRP1Q702N8 1843 aaKnown RBP24.06■■□□□ 1.44
SNX12-206ENST00000622259 MBD5Q9P267 1494 aa24.06■■□□□ 1.44
SNX12-206ENST00000622259 ZC3H13Q5T200 1668 aaKnown RBP24.05■■□□□ 1.44
SNX12-206ENST00000622259 CCNB3Q8WWL7 1395 aa24.04■■□□□ 1.44
SNX12-206ENST00000622259 WASHC2CQ9Y4E1 1318 aa24.04■■□□□ 1.44
SNX12-206ENST00000622259 RTEL1-TNFRSF6BF6WH68 1400 aa24.02■■□□□ 1.44
SNX12-206ENST00000622259 FYCO1Q9BQS8 1478 aa24■■□□□ 1.43
SNX12-206ENST00000622259 FAM135BQ49AJ0 1406 aa24■■□□□ 1.43
SNX12-206ENST00000622259 UPF1Q92900 1129 aaKnown RBP eCLIP23.93■■□□□ 1.429e-9■■■■■ 35.7
SNX12-206ENST00000622259 TIAM1Q13009 1591 aa23.93■■□□□ 1.42
SNX12-206ENST00000622259 LTKP29376 864 aa23.92■■□□□ 1.42
SNX12-206ENST00000622259 ROBO1Q9Y6N7 1651 aa23.9■■□□□ 1.42
SNX12-206ENST00000622259 SCAF11Q99590 1463 aaKnown RBP23.9■■□□□ 1.42
SNX12-206ENST00000622259 NCOA2Q15596 1464 aa23.88■■□□□ 1.41
SNX12-206ENST00000622259 UBR1Q8IWV7 1749 aa23.88■■□□□ 1.41
SNX12-206ENST00000622259 SRCAPQ6ZRS2 3230 aa23.88■■□□□ 1.41
SNX12-206ENST00000622259 ERVK-7P63135 1459 aa23.87■■□□□ 1.41
SNX12-206ENST00000622259 CHIC1Q5VXU3 224 aa23.86■■□□□ 1.41
SNX12-206ENST00000622259 MTUS2Q5JR59 1369 aa23.86■■□□□ 1.41
SNX12-206ENST00000622259 ABCC3O15438 1527 aa23.85■■□□□ 1.41
SNX12-206ENST00000622259 TMEM94Q12767 1356 aa23.85■■□□□ 1.41
SNX12-206ENST00000622259 CCDC141Q6ZP82 1450 aa23.84■■□□□ 1.41
SNX12-206ENST00000622259 ARHGAP23Q9P227 1491 aa23.84■■□□□ 1.41
SNX12-206ENST00000622259 TXNDC2Q86VQ3 553 aa23.84■■□□□ 1.41
SNX12-206ENST00000622259 RBM33Q96EV2 1170 aaKnown RBP23.83■■□□□ 1.41
SNX12-206ENST00000622259 MAP3K1Q13233 1512 aa23.82■■□□□ 1.4
SNX12-206ENST00000622259 CFAP65Q6ZU64 1925 aaKnown RBP23.82■■□□□ 1.4
SNX12-206ENST00000622259 SLIT1O75093 1534 aa23.81■■□□□ 1.4
SNX12-206ENST00000622259 TRIM52Q96A61 297 aa23.78■■□□□ 1.4
SNX12-206ENST00000622259 CAMSAP2Q08AD1 1489 aa23.76■■□□□ 1.39
SNX12-206ENST00000622259 JCADQ9P266 1359 aa23.76■■□□□ 1.39
SNX12-206ENST00000622259 PHLPP1O60346 1717 aa23.76■■□□□ 1.39
SNX12-206ENST00000622259 LRP6O75581 1613 aa23.75■■□□□ 1.39
SNX12-206ENST00000622259 MROH1Q8NDA8 1641 aa23.73■■□□□ 1.39
SNX12-206ENST00000622259 KCNA6P17658 529 aa23.72■■□□□ 1.39
SNX12-206ENST00000622259 CEP162Q5TB80 1403 aa23.72■■□□□ 1.39
SNX12-206ENST00000622259 LRRC9Q6ZRR7 1453 aa23.72■■□□□ 1.39
SNX12-206ENST00000622259 EHBP1L1Q8N3D4 1523 aa23.72■■□□□ 1.39
SNX12-206ENST00000622259 CEP152O94986 1710 aa23.72■■□□□ 1.39
SNX12-206ENST00000622259 PROSER2Q86WR7 435 aaPredicted RBP23.71■■□□□ 1.39
SNX12-206ENST00000622259 RSPH4AQ5TD94 716 aa23.7■■□□□ 1.38
SNX12-206ENST00000622259 EID1Q9Y6B2 187 aa23.7■■□□□ 1.38
SNX12-206ENST00000622259 COL16A1Q07092 1604 aaPredicted RBP23.68■■□□□ 1.38
SNX12-206ENST00000622259 PRDM15P57071 1507 aaPredicted RBP23.68■■□□□ 1.38
SNX12-206ENST00000622259 TMEM2Q9UHN6 1383 aa23.67■■□□□ 1.38
SNX12-206ENST00000622259 SLC26A8Q96RN1 970 aa23.67■■□□□ 1.38
SNX12-206ENST00000622259 SLAIN2Q9P270 581 aa23.67■■□□□ 1.38
SNX12-206ENST00000622259 ARHGEF5Q12774 1597 aa23.66■■□□□ 1.38
SNX12-206ENST00000622259 ZNF772Q68DY9 489 aaPredicted RBP23.66■■□□□ 1.38
SNX12-206ENST00000622259 PIK3C2BO00750 1634 aa23.66■■□□□ 1.38
SNX12-206ENST00000622259 TSPY4P0CV99 314 aa23.65■■□□□ 1.38
SNX12-206ENST00000622259 TSPY10P0CW01 314 aa23.65■■□□□ 1.38
SNX12-206ENST00000622259 TET3O43151 1660 aa23.64■■□□□ 1.38
SNX12-206ENST00000622259 MEX3CQ5U5Q3 659 aaKnown RBP23.63■■□□□ 1.37
SNX12-206ENST00000622259 MSH6P52701 1360 aa23.63■■□□□ 1.37
SNX12-206ENST00000622259 EIF2AK4Q9P2K8 1649 aaKnown RBP23.62■■□□□ 1.37
SNX12-206ENST00000622259 RXRBP28702 533 aa23.61■■□□□ 1.37
SNX12-206ENST00000622259 NWD1Q149M9 1564 aa23.61■■□□□ 1.37
SNX12-206ENST00000622259 SPATA31A6Q5VVP1 1343 aa23.6■■□□□ 1.37
SNX12-206ENST00000622259 NKTRP30414 1462 aaKnown RBP23.59■■□□□ 1.37
SNX12-206ENST00000622259 ARHGAP31Q2M1Z3 1444 aa23.58■■□□□ 1.36
SNX12-206ENST00000622259 MAST1Q9Y2H9 1570 aa23.57■■□□□ 1.36
SNX12-206ENST00000622259 FGD6Q6ZV73 1430 aa23.57■■□□□ 1.36
SNX12-206ENST00000622259 STAG3Q9UJ98 1225 aa23.55■■□□□ 1.36
SNX12-206ENST00000622259 CDK12Q9NYV4 1490 aaPredicted RBP23.55■■□□□ 1.36
SNX12-206ENST00000622259 EFCAB6Q5THR3 1501 aa23.54■■□□□ 1.36
SNX12-206ENST00000622259 IDI1Q13907 227 aa23.53■■□□□ 1.36
SNX12-206ENST00000622259 SHPRHQ149N8 1683 aa23.52■■□□□ 1.36
SNX12-206ENST00000622259 KDM5AP29375 1690 aaKnown RBP23.51■■□□□ 1.35
SNX12-206ENST00000622259 AHDC1Q5TGY3 1603 aaPredicted RBP23.48■■□□□ 1.35
SNX12-206ENST00000622259 RGS12O14924 1447 aa23.48■■□□□ 1.35
SNX12-206ENST00000622259 NUTM2BA6NNL0 878 aaPredicted RBP23.47■■□□□ 1.35
SNX12-206ENST00000622259 NUTM2EB1AL46 878 aaPredicted RBP23.47■■□□□ 1.35
SNX12-206ENST00000622259 NUTM2AQ8IVF1 878 aaPredicted RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms