RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 CCDC191Q8NCU4 936 aa14.29□□□□□ -0.12
CLTC-215ENST00000621829 KTN1Q86UP2 1357 aaKnown RBP14.29□□□□□ -0.12
CLTC-215ENST00000621829 DIAPH3Q9NSV4 1193 aa14.29□□□□□ -0.12
CLTC-215ENST00000621829 PLIN1O60240 522 aa14.28□□□□□ -0.12
CLTC-215ENST00000621829 TPM1P09493 284 aa14.28□□□□□ -0.12
CLTC-215ENST00000621829 TMF1P82094 1093 aa14.28□□□□□ -0.12
CLTC-215ENST00000621829 RRP9O43818 475 aaKnown RBP14.27□□□□□ -0.12
CLTC-215ENST00000621829 SMC4Q9NTJ3 1288 aa14.27□□□□□ -0.13
CLTC-215ENST00000621829 PRDM10Q9NQV6 1147 aa14.27□□□□□ -0.13
CLTC-215ENST00000621829 CENPQQ7L2Z9 268 aaPredicted RBP14.26□□□□□ -0.13
CLTC-215ENST00000621829 CCDC39Q9UFE4 941 aa14.26□□□□□ -0.13
CLTC-215ENST00000621829 MORC1Q86VD1 984 aa14.26□□□□□ -0.13
CLTC-215ENST00000621829 LEKR1Q6ZMV7 388 aa14.26□□□□□ -0.13
CLTC-215ENST00000621829 ERICH4A6NGS2 130 aa14.25□□□□□ -0.13
CLTC-215ENST00000621829 ACBD3Q9H3P7 528 aa14.25□□□□□ -0.13
CLTC-215ENST00000621829 SOX12O15370 315 aa14.25□□□□□ -0.13
CLTC-215ENST00000621829 GORABQ5T7V8 394 aa14.25□□□□□ -0.13
CLTC-215ENST00000621829 EXOC6Q8TAG9 804 aa14.24□□□□□ -0.13
CLTC-215ENST00000621829 MRE11P49959 708 aa14.24□□□□□ -0.13
CLTC-215ENST00000621829 HAP1P54257 671 aaPredicted RBP14.24□□□□□ -0.13
CLTC-215ENST00000621829 CCDC146Q8IYE0 955 aa14.24□□□□□ -0.13
CLTC-215ENST00000621829 WWC1Q8IX03 1113 aa14.24□□□□□ -0.13
CLTC-215ENST00000621829 EEA1Q15075 1411 aa14.24□□□□□ -0.13
CLTC-215ENST00000621829 DCAF11Q8TEB1 546 aa14.23□□□□□ -0.13
CLTC-215ENST00000621829 GPATCH3Q96I76 525 aa14.23□□□□□ -0.13
CLTC-215ENST00000621829 PCMTD1Q96MG8 357 aaPredicted RBP14.23□□□□□ -0.13
CLTC-215ENST00000621829 CHMP5Q9NZZ3 219 aa14.23□□□□□ -0.13
CLTC-215ENST00000621829 UQCRHLA0A096LP55 91 aa14.22□□□□□ -0.13
CLTC-215ENST00000621829 UQCRHP07919 91 aa14.22□□□□□ -0.13
CLTC-215ENST00000621829 TSPYL1Q9H0U9 437 aa14.22□□□□□ -0.13
CLTC-215ENST00000621829 KIF3AQ9Y496 699 aa14.22□□□□□ -0.13
CLTC-215ENST00000621829 CRBNQ96SW2 442 aa14.22□□□□□ -0.13
CLTC-215ENST00000621829 ATP6V1DQ9Y5K8 247 aa14.22□□□□□ -0.13
CLTC-215ENST00000621829 POGKQ9P215 609 aa14.22□□□□□ -0.13
CLTC-215ENST00000621829 FAM184AQ8NB25 1140 aa14.22□□□□□ -0.13
CLTC-215ENST00000621829 RNF214Q8ND24 703 aa14.21□□□□□ -0.13
CLTC-215ENST00000621829 LMOD2Q6P5Q4 547 aa14.21□□□□□ -0.13
CLTC-215ENST00000621829 RILPL2Q969X0 211 aa14.21□□□□□ -0.13
CLTC-215ENST00000621829 RTF1Q92541 710 aaKnown RBP14.21□□□□□ -0.14
CLTC-215ENST00000621829 HMMRO75330 724 aa14.2□□□□□ -0.14
CLTC-215ENST00000621829 GOLGA3Q08378 1498 aa14.2□□□□□ -0.14
CLTC-215ENST00000621829 RBM25P49756 843 aaKnown RBP14.2□□□□□ -0.14
CLTC-215ENST00000621829 ANKRD45Q5TZF3 282 aa14.19□□□□□ -0.14
CLTC-215ENST00000621829 CENPJQ9HC77 1338 aaPredicted RBP14.19□□□□□ -0.14
CLTC-215ENST00000621829 UBE2Q2Q8WVN8 375 aa14.19□□□□□ -0.14
CLTC-215ENST00000621829 SLC4A10Q6U841 1118 aa14.18□□□□□ -0.14
CLTC-215ENST00000621829 DEF6Q9H4E7 631 aa14.18□□□□□ -0.14
CLTC-215ENST00000621829 IPO7O95373 1038 aaKnown RBP14.18□□□□□ -0.14
CLTC-215ENST00000621829 SASS6Q6UVJ0 657 aa14.18□□□□□ -0.14
CLTC-215ENST00000621829 RSF1Q96T23 1441 aaPredicted RBP14.18□□□□□ -0.14
CLTC-215ENST00000621829 DCTN1Q14203 1278 aa14.18□□□□□ -0.14
CLTC-215ENST00000621829 U2AF1L5P0DN76 240 aaPredicted RBP14.17□□□□□ -0.14
CLTC-215ENST00000621829 U2AF1Q01081 240 aaKnown RBP eCLIP14.17□□□□□ -0.149e-7■■■■□ 24.1
CLTC-215ENST00000621829 BICD2Q8TD16 824 aa14.17□□□□□ -0.14
CLTC-215ENST00000621829 CDR1P51861 262 aa14.17□□□□□ -0.14
CLTC-215ENST00000621829 TTLL5Q6EMB2 1281 aa14.17□□□□□ -0.14
CLTC-215ENST00000621829 TRAK2O60296 914 aa14.17□□□□□ -0.14
CLTC-215ENST00000621829 RRP1P56182 461 aaKnown RBP14.17□□□□□ -0.14
CLTC-215ENST00000621829 NAP1L1P55209 391 aaKnown RBP14.17□□□□□ -0.14
CLTC-215ENST00000621829 GPATCH11Q8N954 259 aa14.16□□□□□ -0.14
CLTC-215ENST00000621829 RALBP1Q15311 655 aa14.16□□□□□ -0.14
CLTC-215ENST00000621829 TAF3Q5VWG9 929 aa14.15□□□□□ -0.14
CLTC-215ENST00000621829 FRAT2O75474 233 aaPredicted RBP14.15□□□□□ -0.14
CLTC-215ENST00000621829 AXDND1Q5T1B0 1012 aaPredicted RBP14.15□□□□□ -0.14
CLTC-215ENST00000621829 ZMYND15Q9H091 742 aa14.15□□□□□ -0.14
CLTC-215ENST00000621829 PAK3O75914 559 aaPredicted RBP14.14□□□□□ -0.15
CLTC-215ENST00000621829 STK11IPQ8N1F8 1099 aa14.14□□□□□ -0.15
CLTC-215ENST00000621829 CAVIN1Q6NZI2 390 aaKnown RBP14.14□□□□□ -0.15
CLTC-215ENST00000621829 CAGE1Q8TC20 777 aa14.14□□□□□ -0.15
CLTC-215ENST00000621829 SPC24Q8NBT2 197 aa14.14□□□□□ -0.15
CLTC-215ENST00000621829 ZHX1Q9UKY1 873 aaPredicted RBP14.14□□□□□ -0.15
CLTC-215ENST00000621829 CCDC173Q0VFZ6 552 aa14.13□□□□□ -0.15
CLTC-215ENST00000621829 SCRIBQ14160 1630 aa14.13□□□□□ -0.15
CLTC-215ENST00000621829 MEX3CQ5U5Q3 659 aaKnown RBP14.13□□□□□ -0.15
CLTC-215ENST00000621829 PDILTQ8N807 584 aa14.13□□□□□ -0.15
CLTC-215ENST00000621829 VPS53Q5VIR6 699 aa14.13□□□□□ -0.15
CLTC-215ENST00000621829 DYDC1Q8WWB3 177 aa14.13□□□□□ -0.15
CLTC-215ENST00000621829 BCL2L13Q9BXK5 485 aa14.13□□□□□ -0.15
CLTC-215ENST00000621829 CENPHQ9H3R5 247 aa14.13□□□□□ -0.15
CLTC-215ENST00000621829 CBX1P83916 185 aa14.13□□□□□ -0.15
CLTC-215ENST00000621829 SAFB2Q14151 953 aaKnown RBP eCLIP14.13□□□□□ -0.15
CLTC-215ENST00000621829 SRPK2P78362 688 aaKnown RBP14.13□□□□□ -0.15
CLTC-215ENST00000621829 MPNDQ8N594 471 aa14.12□□□□□ -0.15
CLTC-215ENST00000621829 KIAA0754O94854 1291 aa14.12□□□□□ -0.15
CLTC-215ENST00000621829 TOMM22Q9NS69 142 aa14.12□□□□□ -0.15
CLTC-215ENST00000621829 E9PSI1 815 aa14.12□□□□□ -0.15
CLTC-215ENST00000621829 FOXD1Q16676 465 aa14.12□□□□□ -0.15
CLTC-215ENST00000621829 ZNF526Q8TF50 670 aaPredicted RBP14.12□□□□□ -0.15
CLTC-215ENST00000621829 CHMP4AQ9BY43 222 aa14.12□□□□□ -0.15
CLTC-215ENST00000621829 HMGN5P82970 282 aaKnown RBP14.12□□□□□ -0.15
CLTC-215ENST00000621829 MARCH6O60337 910 aa14.11□□□□□ -0.15
CLTC-215ENST00000621829 FOSBP53539 338 aa14.11□□□□□ -0.15
CLTC-215ENST00000621829 ERCC4Q92889 916 aaPredicted RBP14.11□□□□□ -0.15
CLTC-215ENST00000621829 CCDC9Q9Y3X0 531 aaKnown RBP14.11□□□□□ -0.15
CLTC-215ENST00000621829 NPM1P06748 294 aaKnown RBP eCLIP14.11□□□□□ -0.15
CLTC-215ENST00000621829 CCNB3Q8WWL7 1395 aa14.1□□□□□ -0.15
CLTC-215ENST00000621829 TRERF1Q96PN7 1200 aa14.1□□□□□ -0.15
CLTC-215ENST00000621829 CGNQ9P2M7 1197 aaKnown RBP14.1□□□□□ -0.15
CLTC-215ENST00000621829 GIMAP7Q8NHV1 300 aa14.09□□□□□ -0.15
CLTC-215ENST00000621829 IBSPP21815 317 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms