RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 HFM1A2PYH4 1435 aa16.48■□□□□ 0.23
POLR2J3-221ENST00000621093 MADDQ8WXG6 1647 aa16.48■□□□□ 0.23
POLR2J3-221ENST00000621093 CEP152O94986 1710 aa16.48■□□□□ 0.23
POLR2J3-221ENST00000621093 CLTCQ00610 1675 aaKnown RBP16.46■□□□□ 0.23
POLR2J3-221ENST00000621093 RIMS1Q86UR5 1692 aaKnown RBP16.46■□□□□ 0.23
POLR2J3-221ENST00000621093 GGT6Q6P531 493 aa16.46■□□□□ 0.23
POLR2J3-221ENST00000621093 UNC13BO14795 1591 aa16.45■□□□□ 0.22
POLR2J3-221ENST00000621093 PRDM15P57071 1507 aaPredicted RBP16.43■□□□□ 0.22
POLR2J3-221ENST00000621093 KDM4FA0A1W2PPD8 638 aa16.42■□□□□ 0.22
POLR2J3-221ENST00000621093 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.42■□□□□ 0.22
POLR2J3-221ENST00000621093 SETD5Q9C0A6 1442 aa16.42■□□□□ 0.22
POLR2J3-221ENST00000621093 CFAP65Q6ZU64 1925 aaKnown RBP16.39■□□□□ 0.21
POLR2J3-221ENST00000621093 VWDEQ8N2E2 1590 aa16.39■□□□□ 0.21
POLR2J3-221ENST00000621093 C3P01024 1663 aa16.39■□□□□ 0.21
POLR2J3-221ENST00000621093 ZC3H13Q5T200 1668 aaKnown RBP16.39■□□□□ 0.21
POLR2J3-221ENST00000621093 ABCC3O15438 1527 aa16.39■□□□□ 0.21
POLR2J3-221ENST00000621093 RAB3GAP2Q9H2M9 1393 aa16.38■□□□□ 0.21
POLR2J3-221ENST00000621093 CAMSAP1Q5T5Y3 1602 aa16.38■□□□□ 0.21
POLR2J3-221ENST00000621093 IQGAP3Q86VI3 1631 aa16.38■□□□□ 0.21
POLR2J3-221ENST00000621093 MROH2AA6NES4 1674 aa16.38■□□□□ 0.21
POLR2J3-221ENST00000621093 KDM5DQ9BY66 1539 aa16.38■□□□□ 0.21
POLR2J3-221ENST00000621093 PCGF6Q9BYE7 350 aa16.37■□□□□ 0.21
POLR2J3-221ENST00000621093 WASHC2CQ9Y4E1 1318 aa16.35■□□□□ 0.21
POLR2J3-221ENST00000621093 PLPPR3Q6T4P5 718 aa16.34■□□□□ 0.21
POLR2J3-221ENST00000621093 NUP155O75694 1391 aa16.34■□□□□ 0.21
POLR2J3-221ENST00000621093 TET3O43151 1660 aa16.34■□□□□ 0.21
POLR2J3-221ENST00000621093 TRIM52Q96A61 297 aa16.33■□□□□ 0.2
POLR2J3-221ENST00000621093 ESF1Q9H501 851 aaKnown RBP16.33■□□□□ 0.2
POLR2J3-221ENST00000621093 KANK1Q14678 1352 aa16.33■□□□□ 0.2
POLR2J3-221ENST00000621093 PTPRMP28827 1452 aa16.33■□□□□ 0.2
POLR2J3-221ENST00000621093 FAM135AQ9P2D6 1515 aa16.33■□□□□ 0.2
POLR2J3-221ENST00000621093 E9PCH4 1651 aa16.33■□□□□ 0.2
POLR2J3-221ENST00000621093 PZPP20742 1482 aa16.32■□□□□ 0.2
POLR2J3-221ENST00000621093 CEBPAP49715 358 aaPredicted RBP16.32■□□□□ 0.2
POLR2J3-221ENST00000621093 LMTK2Q8IWU2 1503 aa16.32■□□□□ 0.2
POLR2J3-221ENST00000621093 PPP6R1Q9UPN7 881 aa16.32■□□□□ 0.2
POLR2J3-221ENST00000621093 CNTLNQ9NXG0 1405 aa16.31■□□□□ 0.2
POLR2J3-221ENST00000621093 EFCAB6Q5THR3 1501 aa16.3■□□□□ 0.2
POLR2J3-221ENST00000621093 ZMYM3Q14202 1370 aa16.3■□□□□ 0.2
POLR2J3-221ENST00000621093 PREX1Q8TCU6 1659 aa16.29■□□□□ 0.2
POLR2J3-221ENST00000621093 FBXO31Q5XUX0 539 aaPredicted RBP16.26■□□□□ 0.19
POLR2J3-221ENST00000621093 NPATQ14207 1427 aa16.26■□□□□ 0.19
POLR2J3-221ENST00000621093 HRCP23327 699 aa16.25■□□□□ 0.19
POLR2J3-221ENST00000621093 ARHGAP31Q2M1Z3 1444 aa16.24■□□□□ 0.19
POLR2J3-221ENST00000621093 SPHKAPQ2M3C7 1700 aa16.24■□□□□ 0.19
POLR2J3-221ENST00000621093 MPHOSPH9Q99550 1183 aa16.23■□□□□ 0.19
POLR2J3-221ENST00000621093 SLC4A1APQ9BWU0 796 aaKnown RBP16.23■□□□□ 0.19
POLR2J3-221ENST00000621093 ERVK-7P63135 1459 aa16.22■□□□□ 0.19
POLR2J3-221ENST00000621093 SPATA31D1Q6ZQQ2 1576 aa16.22■□□□□ 0.19
POLR2J3-221ENST00000621093 FOXD1Q16676 465 aa16.22■□□□□ 0.19
POLR2J3-221ENST00000621093 SYNMO15061 1565 aa16.21■□□□□ 0.19
POLR2J3-221ENST00000621093 PKD2Q13563 968 aa16.21■□□□□ 0.19
POLR2J3-221ENST00000621093 SETD1BQ9UPS6 1966 aaKnown RBP16.2■□□□□ 0.18
POLR2J3-221ENST00000621093 MYO3AQ8NEV4 1616 aa16.19■□□□□ 0.18
POLR2J3-221ENST00000621093 RPRD2Q5VT52 1461 aaKnown RBP16.19■□□□□ 0.18
POLR2J3-221ENST00000621093 UGGT1Q9NYU2 1555 aa16.18■□□□□ 0.18
POLR2J3-221ENST00000621093 NOS1P29475 1434 aa16.18■□□□□ 0.18
POLR2J3-221ENST00000621093 ACIN1Q9UKV3 1341 aaKnown RBP16.18■□□□□ 0.18
POLR2J3-221ENST00000621093 MYO5BQ9ULV0 1848 aa16.17■□□□□ 0.18
POLR2J3-221ENST00000621093 TNRQ92752 1358 aa16.16■□□□□ 0.18
POLR2J3-221ENST00000621093 PIK3C2BO00750 1634 aa16.16■□□□□ 0.18
POLR2J3-221ENST00000621093 CLTCL1P53675 1640 aa16.16■□□□□ 0.18
POLR2J3-221ENST00000621093 PLA2R1Q13018 1463 aa16.15■□□□□ 0.18
POLR2J3-221ENST00000621093 PTPRTO14522 1441 aa16.14■□□□□ 0.17
POLR2J3-221ENST00000621093 ZNF142P52746 1687 aaPredicted RBP16.14■□□□□ 0.17
POLR2J3-221ENST00000621093 TRPM2O94759 1503 aa16.14■□□□□ 0.17
POLR2J3-221ENST00000621093 DHX57Q6P158 1386 aaKnown RBP16.13■□□□□ 0.17
POLR2J3-221ENST00000621093 UBR1Q8IWV7 1749 aa16.12■□□□□ 0.17
POLR2J3-221ENST00000621093 CEP170BQ9Y4F5 1589 aaPredicted RBP16.12■□□□□ 0.17
POLR2J3-221ENST00000621093 KIF1BO60333 1816 aa16.12■□□□□ 0.17
POLR2J3-221ENST00000621093 AEBP2Q6ZN18 517 aaPredicted RBP16.11■□□□□ 0.17
POLR2J3-221ENST00000621093 UHRF1BP1Q6BDS2 1440 aa16.1■□□□□ 0.17
POLR2J3-221ENST00000621093 IDI1Q13907 227 aa16.09■□□□□ 0.17
POLR2J3-221ENST00000621093 A2ML1A8K2U0 1454 aa16.09■□□□□ 0.17
POLR2J3-221ENST00000621093 LMTK3Q96Q04 1460 aa16.09■□□□□ 0.17
POLR2J3-221ENST00000621093 NLRP1Q9C000 1473 aa16.09■□□□□ 0.17
POLR2J3-221ENST00000621093 ANKRD30BQ9BXX2 1392 aa16.08■□□□□ 0.16
POLR2J3-221ENST00000621093 TMEM131LA2VDJ0 1609 aa16.08■□□□□ 0.16
POLR2J3-221ENST00000621093 ADGRB3O60242 1522 aa16.06■□□□□ 0.16
POLR2J3-221ENST00000621093 KDM5AP29375 1690 aaKnown RBP16.05■□□□□ 0.16
POLR2J3-221ENST00000621093 CHGAP10645 457 aaKnown RBP16.04■□□□□ 0.16
POLR2J3-221ENST00000621093 SLC52A1Q9NWF4 448 aa16.04■□□□□ 0.16
POLR2J3-221ENST00000621093 CCDC144AA2RUR9 1427 aa16.03■□□□□ 0.16
POLR2J3-221ENST00000621093 HSPA2P54652 639 aa16.03■□□□□ 0.16
POLR2J3-221ENST00000621093 SIN3AQ96ST3 1273 aa16.01■□□□□ 0.15
POLR2J3-221ENST00000621093 STAG3Q9UJ98 1225 aa16.01■□□□□ 0.15
POLR2J3-221ENST00000621093 STRCQ7RTU9 1775 aa16■□□□□ 0.15
POLR2J3-221ENST00000621093 POLR1AO95602 1720 aaPredicted RBP15.99■□□□□ 0.15
POLR2J3-221ENST00000621093 IFT172Q9UG01 1749 aa15.99■□□□□ 0.15
POLR2J3-221ENST00000621093 PPLO60437 1756 aa15.98■□□□□ 0.15
POLR2J3-221ENST00000621093 SPATA31E1Q6ZUB1 1445 aa15.97■□□□□ 0.15
POLR2J3-221ENST00000621093 SLIT1O75093 1534 aa15.96■□□□□ 0.15
POLR2J3-221ENST00000621093 NEUROD1Q13562 356 aa15.96■□□□□ 0.15
POLR2J3-221ENST00000621093 THEMISQ8N1K5 641 aaPredicted RBP15.96■□□□□ 0.15
POLR2J3-221ENST00000621093 ARHGAP23Q9P227 1491 aa15.96■□□□□ 0.14
POLR2J3-221ENST00000621093 NEXMIFQ5QGS0 1516 aa15.95■□□□□ 0.14
POLR2J3-221ENST00000621093 RGL3Q3MIN7 710 aa15.95■□□□□ 0.14
POLR2J3-221ENST00000621093 ZNF326Q5BKZ1 582 aaKnown RBP15.95■□□□□ 0.14
POLR2J3-221ENST00000621093 CCER1Q8TC90 406 aaPredicted RBP15.95■□□□□ 0.14
POLR2J3-221ENST00000621093 TMEM2Q9UHN6 1383 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms