RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 ADAMTSL3P82987 1691 aa20.52■□□□□ 0.88
NEK3-210ENST00000620675 FER1L4A9Z1Z3 1794 aa20.51■□□□□ 0.87
NEK3-210ENST00000620675 MADDQ8WXG6 1647 aa20.51■□□□□ 0.87
NEK3-210ENST00000620675 CEP152O94986 1710 aa20.5■□□□□ 0.87
NEK3-210ENST00000620675 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.49■□□□□ 0.877e-6■■■□□ 15
NEK3-210ENST00000620675 PCGF6Q9BYE7 350 aa20.49■□□□□ 0.87
NEK3-210ENST00000620675 SETD5Q9C0A6 1442 aa20.48■□□□□ 0.87
NEK3-210ENST00000620675 CLTCQ00610 1675 aaKnown RBP20.48■□□□□ 0.87
NEK3-210ENST00000620675 KDM4FA0A1W2PPD8 638 aa20.48■□□□□ 0.87
NEK3-210ENST00000620675 CFAP65Q6ZU64 1925 aaKnown RBP20.48■□□□□ 0.87
NEK3-210ENST00000620675 UNC13BO14795 1591 aa20.47■□□□□ 0.87
NEK3-210ENST00000620675 RIMS1Q86UR5 1692 aaKnown RBP20.47■□□□□ 0.87
NEK3-210ENST00000620675 PRDM15P57071 1507 aaPredicted RBP20.47■□□□□ 0.87
NEK3-210ENST00000620675 RAB3GAP2Q9H2M9 1393 aa20.47■□□□□ 0.87
NEK3-210ENST00000620675 VWDEQ8N2E2 1590 aa20.43■□□□□ 0.86
NEK3-210ENST00000620675 ABCC3O15438 1527 aa20.42■□□□□ 0.86
NEK3-210ENST00000620675 KDM5DQ9BY66 1539 aa20.4■□□□□ 0.86
NEK3-210ENST00000620675 IQGAP3Q86VI3 1631 aa20.39■□□□□ 0.86
NEK3-210ENST00000620675 WASHC2CQ9Y4E1 1318 aa20.39■□□□□ 0.86
NEK3-210ENST00000620675 NUP155O75694 1391 aa20.39■□□□□ 0.85
NEK3-210ENST00000620675 C3P01024 1663 aa20.39■□□□□ 0.85
NEK3-210ENST00000620675 PLPPR3Q6T4P5 718 aa20.39■□□□□ 0.85
NEK3-210ENST00000620675 CAMSAP1Q5T5Y3 1602 aa20.38■□□□□ 0.85
NEK3-210ENST00000620675 ZC3H13Q5T200 1668 aaKnown RBP20.38■□□□□ 0.85
NEK3-210ENST00000620675 CEBPAP49715 358 aaPredicted RBP20.38■□□□□ 0.85
NEK3-210ENST00000620675 TRIM52Q96A61 297 aa20.38■□□□□ 0.85
NEK3-210ENST00000620675 FAM135AQ9P2D6 1515 aa20.37■□□□□ 0.85
NEK3-210ENST00000620675 MROH2AA6NES4 1674 aa20.36■□□□□ 0.85
NEK3-210ENST00000620675 PZPP20742 1482 aa20.36■□□□□ 0.85
NEK3-210ENST00000620675 PTPRMP28827 1452 aa20.34■□□□□ 0.85
NEK3-210ENST00000620675 KANK1Q14678 1352 aa20.34■□□□□ 0.85
NEK3-210ENST00000620675 ESF1Q9H501 851 aaKnown RBP20.34■□□□□ 0.85
NEK3-210ENST00000620675 E9PCH4 1651 aa20.34■□□□□ 0.85
NEK3-210ENST00000620675 TET3O43151 1660 aa20.34■□□□□ 0.85
NEK3-210ENST00000620675 ZMYM3Q14202 1370 aa20.34■□□□□ 0.85
NEK3-210ENST00000620675 LMTK2Q8IWU2 1503 aa20.33■□□□□ 0.84
NEK3-210ENST00000620675 PPP6R1Q9UPN7 881 aa20.33■□□□□ 0.84
NEK3-210ENST00000620675 EFCAB6Q5THR3 1501 aa20.32■□□□□ 0.84
NEK3-210ENST00000620675 CNTLNQ9NXG0 1405 aa20.31■□□□□ 0.84
NEK3-210ENST00000620675 FBXO31Q5XUX0 539 aaPredicted RBP20.3■□□□□ 0.84
NEK3-210ENST00000620675 NPATQ14207 1427 aa20.29■□□□□ 0.84
NEK3-210ENST00000620675 FOXD1Q16676 465 aa20.28■□□□□ 0.84
NEK3-210ENST00000620675 PREX1Q8TCU6 1659 aa20.27■□□□□ 0.84
NEK3-210ENST00000620675 HRCP23327 699 aa20.26■□□□□ 0.83
NEK3-210ENST00000620675 SLC4A1APQ9BWU0 796 aaKnown RBP20.26■□□□□ 0.83
NEK3-210ENST00000620675 MPHOSPH9Q99550 1183 aa20.25■□□□□ 0.83
NEK3-210ENST00000620675 PKD2Q13563 968 aa20.24■□□□□ 0.83
NEK3-210ENST00000620675 ARHGAP31Q2M1Z3 1444 aa20.24■□□□□ 0.83
NEK3-210ENST00000620675 SETD1BQ9UPS6 1966 aaKnown RBP20.23■□□□□ 0.83
NEK3-210ENST00000620675 ERVK-7P63135 1459 aa20.22■□□□□ 0.83
NEK3-210ENST00000620675 SPHKAPQ2M3C7 1700 aa20.21■□□□□ 0.83
NEK3-210ENST00000620675 SYNMO15061 1565 aa20.21■□□□□ 0.83
NEK3-210ENST00000620675 SPATA31D1Q6ZQQ2 1576 aa20.2■□□□□ 0.82
NEK3-210ENST00000620675 UGGT1Q9NYU2 1555 aa20.2■□□□□ 0.82
NEK3-210ENST00000620675 PLA2R1Q13018 1463 aa20.18■□□□□ 0.82
NEK3-210ENST00000620675 RPRD2Q5VT52 1461 aaKnown RBP20.18■□□□□ 0.82
NEK3-210ENST00000620675 NOS1P29475 1434 aa20.17■□□□□ 0.82
NEK3-210ENST00000620675 DHX57Q6P158 1386 aaKnown RBP20.15■□□□□ 0.82
NEK3-210ENST00000620675 MYO3AQ8NEV4 1616 aa20.15■□□□□ 0.82
NEK3-210ENST00000620675 TNRQ92752 1358 aa20.15■□□□□ 0.82
NEK3-210ENST00000620675 MYO5BQ9ULV0 1848 aa20.14■□□□□ 0.81
NEK3-210ENST00000620675 PTPRTO14522 1441 aa20.13■□□□□ 0.81
NEK3-210ENST00000620675 ACIN1Q9UKV3 1341 aaKnown RBP20.12■□□□□ 0.81
NEK3-210ENST00000620675 CLTCL1P53675 1640 aa20.12■□□□□ 0.81
NEK3-210ENST00000620675 PIK3C2BO00750 1634 aa20.11■□□□□ 0.81
NEK3-210ENST00000620675 TRPM2O94759 1503 aa20.11■□□□□ 0.81
NEK3-210ENST00000620675 IDI1Q13907 227 aa20.09■□□□□ 0.81
NEK3-210ENST00000620675 ANKRD30BQ9BXX2 1392 aa20.08■□□□□ 0.8
NEK3-210ENST00000620675 CEP170BQ9Y4F5 1589 aaPredicted RBP20.07■□□□□ 0.8
NEK3-210ENST00000620675 ZNF142P52746 1687 aaPredicted RBP20.07■□□□□ 0.8
NEK3-210ENST00000620675 UBR1Q8IWV7 1749 aa20.06■□□□□ 0.8
NEK3-210ENST00000620675 LMTK3Q96Q04 1460 aa20.05■□□□□ 0.8
NEK3-210ENST00000620675 UHRF1BP1Q6BDS2 1440 aa20.04■□□□□ 0.8
NEK3-210ENST00000620675 KIF1BO60333 1816 aa20.04■□□□□ 0.8
NEK3-210ENST00000620675 AEBP2Q6ZN18 517 aaPredicted RBP20.04■□□□□ 0.8
NEK3-210ENST00000620675 NLRP1Q9C000 1473 aa20.03■□□□□ 0.8
NEK3-210ENST00000620675 A2ML1A8K2U0 1454 aa20.03■□□□□ 0.8
NEK3-210ENST00000620675 TMEM131LA2VDJ0 1609 aa20.03■□□□□ 0.8
NEK3-210ENST00000620675 HSPA2P54652 639 aa20.02■□□□□ 0.8
NEK3-210ENST00000620675 SLC52A1Q9NWF4 448 aa20.01■□□□□ 0.79
NEK3-210ENST00000620675 SIN3AQ96ST3 1273 aa20.01■□□□□ 0.79
NEK3-210ENST00000620675 CCDC144AA2RUR9 1427 aa20■□□□□ 0.79
NEK3-210ENST00000620675 ADGRB3O60242 1522 aa20■□□□□ 0.79
NEK3-210ENST00000620675 CHGAP10645 457 aaKnown RBP19.99■□□□□ 0.79
NEK3-210ENST00000620675 KDM5AP29375 1690 aaKnown RBP19.97■□□□□ 0.79
NEK3-210ENST00000620675 STAG3Q9UJ98 1225 aa19.95■□□□□ 0.78
NEK3-210ENST00000620675 SPATA31E1Q6ZUB1 1445 aa19.94■□□□□ 0.78
NEK3-210ENST00000620675 CCER1Q8TC90 406 aaPredicted RBP19.93■□□□□ 0.78
NEK3-210ENST00000620675 NEUROD1Q13562 356 aa19.93■□□□□ 0.78
NEK3-210ENST00000620675 RGL3Q3MIN7 710 aa19.93■□□□□ 0.78
NEK3-210ENST00000620675 STRCQ7RTU9 1775 aa19.92■□□□□ 0.78
NEK3-210ENST00000620675 NUTM2DQ5VT03 806 aaPredicted RBP19.92■□□□□ 0.78
NEK3-210ENST00000620675 SENP3Q9H4L4 574 aaPredicted RBP19.9■□□□□ 0.78
NEK3-210ENST00000620675 THEMISQ8N1K5 641 aaPredicted RBP19.9■□□□□ 0.78
NEK3-210ENST00000620675 PPLO60437 1756 aa19.89■□□□□ 0.78
NEK3-210ENST00000620675 IFT172Q9UG01 1749 aa19.89■□□□□ 0.77
NEK3-210ENST00000620675 ZNF326Q5BKZ1 582 aaKnown RBP19.89■□□□□ 0.77
NEK3-210ENST00000620675 SLIT1O75093 1534 aa19.89■□□□□ 0.77
NEK3-210ENST00000620675 NEXMIFQ5QGS0 1516 aa19.89■□□□□ 0.77
NEK3-210ENST00000620675 ARHGAP23Q9P227 1491 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms