RNA–Protein interactions for RNA: ENST00000620232.1

SNORD3A-202, Transcript of small nucleolar RNA, C/D box 3A, humanhuman

Gene SNORD3A, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3A-202ENST00000620232 RAB3GAP2Q9H2M9 1393 aa16.38■□□□□ 0.21
SNORD3A-202ENST00000620232 AGLP35573 1532 aa16.36■□□□□ 0.21
SNORD3A-202ENST00000620232 YEATS2Q9ULM3 1422 aa16.35■□□□□ 0.21
SNORD3A-202ENST00000620232 FAM135AQ9P2D6 1515 aa16.35■□□□□ 0.21
SNORD3A-202ENST00000620232 IQGAP3Q86VI3 1631 aa16.34■□□□□ 0.21
SNORD3A-202ENST00000620232 KANK1Q14678 1352 aa16.34■□□□□ 0.21
SNORD3A-202ENST00000620232 PRDM15P57071 1507 aaPredicted RBP16.32■□□□□ 0.2
SNORD3A-202ENST00000620232 KDM5DQ9BY66 1539 aa16.32■□□□□ 0.2
SNORD3A-202ENST00000620232 CEP152O94986 1710 aa16.31■□□□□ 0.2
SNORD3A-202ENST00000620232 TET3O43151 1660 aa16.3■□□□□ 0.2
SNORD3A-202ENST00000620232 KIF3BO15066 747 aa16.29■□□□□ 0.2
SNORD3A-202ENST00000620232 TRIM52Q96A61 297 aa16.29■□□□□ 0.2
SNORD3A-202ENST00000620232 FER1L4A9Z1Z3 1794 aa16.28■□□□□ 0.2
SNORD3A-202ENST00000620232 PPP6R1Q9UPN7 881 aa16.27■□□□□ 0.2
SNORD3A-202ENST00000620232 MROH2AA6NES4 1674 aa16.27■□□□□ 0.19
SNORD3A-202ENST00000620232 SIGLEC1Q9BZZ2 1709 aa16.26■□□□□ 0.19
SNORD3A-202ENST00000620232 CFAP65Q6ZU64 1925 aaKnown RBP16.26■□□□□ 0.19
SNORD3A-202ENST00000620232 CAMSAP1Q5T5Y3 1602 aa16.26■□□□□ 0.19
SNORD3A-202ENST00000620232 MROH1Q8NDA8 1641 aa16.26■□□□□ 0.19
SNORD3A-202ENST00000620232 NUP155O75694 1391 aa16.25■□□□□ 0.19
SNORD3A-202ENST00000620232 CLTCQ00610 1675 aaKnown RBP16.24■□□□□ 0.19
SNORD3A-202ENST00000620232 ARID4BQ4LE39 1312 aaPredicted RBP16.24■□□□□ 0.19
SNORD3A-202ENST00000620232 VWDEQ8N2E2 1590 aa16.24■□□□□ 0.19
SNORD3A-202ENST00000620232 ESF1Q9H501 851 aaKnown RBP16.23■□□□□ 0.19
SNORD3A-202ENST00000620232 SPHKAPQ2M3C7 1700 aa16.22■□□□□ 0.19
SNORD3A-202ENST00000620232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.22■□□□□ 0.19
SNORD3A-202ENST00000620232 E9PCH4 1651 aa16.21■□□□□ 0.19
SNORD3A-202ENST00000620232 LMTK2Q8IWU2 1503 aa16.21■□□□□ 0.19
SNORD3A-202ENST00000620232 GGT6Q6P531 493 aa16.21■□□□□ 0.19
SNORD3A-202ENST00000620232 SLC4A1APQ9BWU0 796 aaKnown RBP16.2■□□□□ 0.18
SNORD3A-202ENST00000620232 CLSPNQ9HAW4 1339 aa16.19■□□□□ 0.18
SNORD3A-202ENST00000620232 CNTLNQ9NXG0 1405 aa16.19■□□□□ 0.18
SNORD3A-202ENST00000620232 EFCAB6Q5THR3 1501 aa16.19■□□□□ 0.18
SNORD3A-202ENST00000620232 WASHC2CQ9Y4E1 1318 aa16.19■□□□□ 0.18
SNORD3A-202ENST00000620232 PZPP20742 1482 aa16.18■□□□□ 0.18
SNORD3A-202ENST00000620232 RPRD2Q5VT52 1461 aaKnown RBP16.18■□□□□ 0.18
SNORD3A-202ENST00000620232 CCER1Q8TC90 406 aaPredicted RBP16.18■□□□□ 0.18
SNORD3A-202ENST00000620232 ABCC3O15438 1527 aa16.18■□□□□ 0.18
SNORD3A-202ENST00000620232 KIF1BO60333 1816 aa16.17■□□□□ 0.18
SNORD3A-202ENST00000620232 MPHOSPH9Q99550 1183 aa16.17■□□□□ 0.18
SNORD3A-202ENST00000620232 SENP3Q9H4L4 574 aaPredicted RBP16.17■□□□□ 0.18
SNORD3A-202ENST00000620232 DHX57Q6P158 1386 aaKnown RBP16.15■□□□□ 0.18
SNORD3A-202ENST00000620232 ADAMTSL3P82987 1691 aa16.15■□□□□ 0.18
SNORD3A-202ENST00000620232 RIMS1Q86UR5 1692 aaKnown RBP16.14■□□□□ 0.18
SNORD3A-202ENST00000620232 PREX1Q8TCU6 1659 aa16.14■□□□□ 0.18
SNORD3A-202ENST00000620232 C3P01024 1663 aa16.13■□□□□ 0.17
SNORD3A-202ENST00000620232 ARHGAP31Q2M1Z3 1444 aa16.12■□□□□ 0.17
SNORD3A-202ENST00000620232 MLECQ14165 292 aa16.12■□□□□ 0.17
SNORD3A-202ENST00000620232 MADDQ8WXG6 1647 aa16.12■□□□□ 0.17
SNORD3A-202ENST00000620232 SETD1BQ9UPS6 1966 aaKnown RBP16.11■□□□□ 0.17
SNORD3A-202ENST00000620232 PKD2Q13563 968 aa16.11■□□□□ 0.17
SNORD3A-202ENST00000620232 TRPM2O94759 1503 aa16.08■□□□□ 0.16
SNORD3A-202ENST00000620232 KDM5AP29375 1690 aaKnown RBP16.05■□□□□ 0.16
SNORD3A-202ENST00000620232 CCDC144AA2RUR9 1427 aa16.04■□□□□ 0.16
SNORD3A-202ENST00000620232 NPATQ14207 1427 aa16.04■□□□□ 0.16
SNORD3A-202ENST00000620232 SPATA31D1Q6ZQQ2 1576 aa16.04■□□□□ 0.16
SNORD3A-202ENST00000620232 ZMYM3Q14202 1370 aa16.03■□□□□ 0.16
SNORD3A-202ENST00000620232 PIK3C2BO00750 1634 aa16.03■□□□□ 0.16
SNORD3A-202ENST00000620232 ZEB1P37275 1124 aaPredicted RBP16.02■□□□□ 0.16
SNORD3A-202ENST00000620232 PTPRTO14522 1441 aa16.02■□□□□ 0.15
SNORD3A-202ENST00000620232 ANKRD30BQ9BXX2 1392 aa16.01■□□□□ 0.15
SNORD3A-202ENST00000620232 MYO5BQ9ULV0 1848 aa16.01■□□□□ 0.15
SNORD3A-202ENST00000620232 ERVK-7P63135 1459 aa16.01■□□□□ 0.15
SNORD3A-202ENST00000620232 CLTCL1P53675 1640 aa16.01■□□□□ 0.15
SNORD3A-202ENST00000620232 NEURL4Q96JN8 1562 aa16■□□□□ 0.15
SNORD3A-202ENST00000620232 NOS1P29475 1434 aa15.99■□□□□ 0.15
SNORD3A-202ENST00000620232 SYNMO15061 1565 aa15.99■□□□□ 0.15
SNORD3A-202ENST00000620232 SLC52A1Q9NWF4 448 aa15.98■□□□□ 0.15
SNORD3A-202ENST00000620232 TIMELESSQ9UNS1 1208 aa15.98■□□□□ 0.15
SNORD3A-202ENST00000620232 FOXD1Q16676 465 aa15.97■□□□□ 0.15
SNORD3A-202ENST00000620232 MYO3AQ8NEV4 1616 aa15.96■□□□□ 0.15
SNORD3A-202ENST00000620232 ZNF142P52746 1687 aaPredicted RBP15.95■□□□□ 0.14
SNORD3A-202ENST00000620232 TONSLQ96HA7 1378 aa15.95■□□□□ 0.14
SNORD3A-202ENST00000620232 NLRP1Q9C000 1473 aa15.95■□□□□ 0.14
SNORD3A-202ENST00000620232 IFT172Q9UG01 1749 aa15.94■□□□□ 0.14
SNORD3A-202ENST00000620232 TNRQ92752 1358 aa15.94■□□□□ 0.14
SNORD3A-202ENST00000620232 PTPRMP28827 1452 aa15.94■□□□□ 0.14
SNORD3A-202ENST00000620232 PPLO60437 1756 aa15.94■□□□□ 0.14
SNORD3A-202ENST00000620232 UBR1Q8IWV7 1749 aa15.94■□□□□ 0.14
SNORD3A-202ENST00000620232 PLA2R1Q13018 1463 aa15.92■□□□□ 0.14
SNORD3A-202ENST00000620232 NEUROD1Q13562 356 aa15.92■□□□□ 0.14
SNORD3A-202ENST00000620232 TMEM131LA2VDJ0 1609 aa15.92■□□□□ 0.14
SNORD3A-202ENST00000620232 ADGRB3O60242 1522 aa15.92■□□□□ 0.14
SNORD3A-202ENST00000620232 STAC3Q96MF2 364 aa15.91■□□□□ 0.14
SNORD3A-202ENST00000620232 STAG3Q9UJ98 1225 aa15.9■□□□□ 0.14
SNORD3A-202ENST00000620232 UGGT1Q9NYU2 1555 aa15.89■□□□□ 0.13
SNORD3A-202ENST00000620232 CEP170BQ9Y4F5 1589 aaPredicted RBP15.88■□□□□ 0.13
SNORD3A-202ENST00000620232 FBXO31Q5XUX0 539 aaPredicted RBP15.88■□□□□ 0.13
SNORD3A-202ENST00000620232 SIN3AQ96ST3 1273 aa15.88■□□□□ 0.13
SNORD3A-202ENST00000620232 A2ML1A8K2U0 1454 aa15.86■□□□□ 0.13
SNORD3A-202ENST00000620232 CHGAP10645 457 aaKnown RBP15.86■□□□□ 0.13
SNORD3A-202ENST00000620232 HDGFP51858 240 aaKnown RBP15.86■□□□□ 0.13
SNORD3A-202ENST00000620232 RPGRIP1LQ68CZ1 1315 aa15.86■□□□□ 0.13
SNORD3A-202ENST00000620232 CEBPAP49715 358 aaPredicted RBP15.85■□□□□ 0.13
SNORD3A-202ENST00000620232 PLPPR3Q6T4P5 718 aa15.85■□□□□ 0.13
SNORD3A-202ENST00000620232 POLR1AO95602 1720 aaPredicted RBP15.85■□□□□ 0.13
SNORD3A-202ENST00000620232 KIAA1210Q9ULL0 1709 aa15.85■□□□□ 0.13
SNORD3A-202ENST00000620232 UHRF1BP1Q6BDS2 1440 aa15.85■□□□□ 0.13
SNORD3A-202ENST00000620232 SPATA31E1Q6ZUB1 1445 aa15.85■□□□□ 0.13
SNORD3A-202ENST00000620232 LAMC1P11047 1609 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms