RNA–Protein interactions for RNA: ENST00000619924.1

LINC01140-211, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

Gene LINC01140, Length 1,034 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-211ENST00000619924 MADDQ8WXG6 1647 aa33.78■■■■□ 3
LINC01140-211ENST00000619924 FAM135AQ9P2D6 1515 aa33.77■■■■□ 3
LINC01140-211ENST00000619924 ZC3H13Q5T200 1668 aaKnown RBP33.73■■■□□ 2.99
LINC01140-211ENST00000619924 KIF3BO15066 747 aa33.72■■■□□ 2.99
LINC01140-211ENST00000619924 KDM5DQ9BY66 1539 aa33.7■■■□□ 2.99
LINC01140-211ENST00000619924 VWDEQ8N2E2 1590 aa33.7■■■□□ 2.99
LINC01140-211ENST00000619924 TRIM26Q12899 539 aaPredicted RBP33.7■■■□□ 2.99
LINC01140-211ENST00000619924 RIMS1Q86UR5 1692 aaKnown RBP33.68■■■□□ 2.98
LINC01140-211ENST00000619924 MROH2AA6NES4 1674 aa33.68■■■□□ 2.98
LINC01140-211ENST00000619924 CLTCQ00610 1675 aaKnown RBP33.67■■■□□ 2.98
LINC01140-211ENST00000619924 CEP152O94986 1710 aa33.67■■■□□ 2.98
LINC01140-211ENST00000619924 ABCC3O15438 1527 aa33.64■■■□□ 2.98
LINC01140-211ENST00000619924 MLECQ14165 292 aa33.64■■■□□ 2.98
LINC01140-211ENST00000619924 IQGAP3Q86VI3 1631 aa33.63■■■□□ 2.97
LINC01140-211ENST00000619924 SETD5Q9C0A6 1442 aa33.62■■■□□ 2.97
LINC01140-211ENST00000619924 CNTLNQ9NXG0 1405 aa33.61■■■□□ 2.97
LINC01140-211ENST00000619924 GGT6Q6P531 493 aa33.6■■■□□ 2.97
LINC01140-211ENST00000619924 LMTK2Q8IWU2 1503 aa33.59■■■□□ 2.97
LINC01140-211ENST00000619924 PPP6R1Q9UPN7 881 aa33.59■■■□□ 2.97
LINC01140-211ENST00000619924 CAMSAP1Q5T5Y3 1602 aa33.58■■■□□ 2.97
LINC01140-211ENST00000619924 KDM4FA0A1W2PPD8 638 aa33.58■■■□□ 2.97
LINC01140-211ENST00000619924 C3P01024 1663 aa33.56■■■□□ 2.96
LINC01140-211ENST00000619924 TET3O43151 1660 aa33.54■■■□□ 2.96
LINC01140-211ENST00000619924 RAB3GAP2Q9H2M9 1393 aa33.53■■■□□ 2.96
LINC01140-211ENST00000619924 KANK1Q14678 1352 aa33.51■■■□□ 2.96
LINC01140-211ENST00000619924 EFCAB6Q5THR3 1501 aa33.51■■■□□ 2.95
LINC01140-211ENST00000619924 PTPRMP28827 1452 aa33.5■■■□□ 2.95
LINC01140-211ENST00000619924 WASHC2CQ9Y4E1 1318 aa33.46■■■□□ 2.95
LINC01140-211ENST00000619924 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.45■■■□□ 2.95
LINC01140-211ENST00000619924 NUP155O75694 1391 aa33.44■■■□□ 2.94
LINC01140-211ENST00000619924 PZPP20742 1482 aa33.44■■■□□ 2.94
LINC01140-211ENST00000619924 ESF1Q9H501 851 aaKnown RBP33.42■■■□□ 2.94
LINC01140-211ENST00000619924 ARHGAP31Q2M1Z3 1444 aa33.42■■■□□ 2.94
LINC01140-211ENST00000619924 E9PCH4 1651 aa33.42■■■□□ 2.94
LINC01140-211ENST00000619924 ZMYM3Q14202 1370 aa33.4■■■□□ 2.94
LINC01140-211ENST00000619924 ACIN1Q9UKV3 1341 aaKnown RBP33.39■■■□□ 2.94
LINC01140-211ENST00000619924 NPATQ14207 1427 aa33.38■■■□□ 2.93
LINC01140-211ENST00000619924 HRCP23327 699 aa33.38■■■□□ 2.93
LINC01140-211ENST00000619924 PREX1Q8TCU6 1659 aa33.38■■■□□ 2.93
LINC01140-211ENST00000619924 RPRD2Q5VT52 1461 aaKnown RBP33.37■■■□□ 2.93
LINC01140-211ENST00000619924 SPATA31D1Q6ZQQ2 1576 aa33.34■■■□□ 2.93
LINC01140-211ENST00000619924 ERVK-7P63135 1459 aa33.31■■■□□ 2.92
LINC01140-211ENST00000619924 CFAP65Q6ZU64 1925 aaKnown RBP33.3■■■□□ 2.92
LINC01140-211ENST00000619924 TRIM52Q96A61 297 aa33.29■■■□□ 2.92
LINC01140-211ENST00000619924 PCGF6Q9BYE7 350 aa33.27■■■□□ 2.92
LINC01140-211ENST00000619924 SPHKAPQ2M3C7 1700 aa33.27■■■□□ 2.92
LINC01140-211ENST00000619924 CEBPAP49715 358 aaPredicted RBP33.26■■■□□ 2.91
LINC01140-211ENST00000619924 SETD1BQ9UPS6 1966 aaKnown RBP33.25■■■□□ 2.91
LINC01140-211ENST00000619924 MYO3AQ8NEV4 1616 aa33.25■■■□□ 2.91
LINC01140-211ENST00000619924 SYNMO15061 1565 aa33.24■■■□□ 2.91
LINC01140-211ENST00000619924 NOS1P29475 1434 aa33.23■■■□□ 2.91
LINC01140-211ENST00000619924 ZNF142P52746 1687 aaPredicted RBP33.2■■■□□ 2.91
LINC01140-211ENST00000619924 SLC4A1APQ9BWU0 796 aaKnown RBP33.19■■■□□ 2.9
LINC01140-211ENST00000619924 PIK3C2BO00750 1634 aa33.17■■■□□ 2.9
LINC01140-211ENST00000619924 FBXO31Q5XUX0 539 aaPredicted RBP33.16■■■□□ 2.9
LINC01140-211ENST00000619924 MPHOSPH9Q99550 1183 aa33.16■■■□□ 2.9
LINC01140-211ENST00000619924 TNRQ92752 1358 aa33.16■■■□□ 2.9
LINC01140-211ENST00000619924 PTPRTO14522 1441 aa33.16■■■□□ 2.9
LINC01140-211ENST00000619924 TRPM2O94759 1503 aa33.16■■■□□ 2.9
LINC01140-211ENST00000619924 PLPPR3Q6T4P5 718 aa33.14■■■□□ 2.9
LINC01140-211ENST00000619924 PKD2Q13563 968 aa33.13■■■□□ 2.89
LINC01140-211ENST00000619924 CEP170BQ9Y4F5 1589 aaPredicted RBP33.11■■■□□ 2.89
LINC01140-211ENST00000619924 NLRP1Q9C000 1473 aa33.11■■■□□ 2.89
LINC01140-211ENST00000619924 PLA2R1Q13018 1463 aa33.09■■■□□ 2.89
LINC01140-211ENST00000619924 KDM5AP29375 1690 aaKnown RBP33.07■■■□□ 2.89
LINC01140-211ENST00000619924 CLTCL1P53675 1640 aa33.07■■■□□ 2.88
LINC01140-211ENST00000619924 UGGT1Q9NYU2 1555 aa33.07■■■□□ 2.88
LINC01140-211ENST00000619924 UHRF1BP1Q6BDS2 1440 aa33.06■■■□□ 2.88
LINC01140-211ENST00000619924 LMTK3Q96Q04 1460 aa33.05■■■□□ 2.88
LINC01140-211ENST00000619924 A2ML1A8K2U0 1454 aa33.05■■■□□ 2.88
LINC01140-211ENST00000619924 UBR1Q8IWV7 1749 aa33.03■■■□□ 2.88
LINC01140-211ENST00000619924 DHX57Q6P158 1386 aaKnown RBP33.02■■■□□ 2.88
LINC01140-211ENST00000619924 ADGRB3O60242 1522 aa33.01■■■□□ 2.87
LINC01140-211ENST00000619924 FOXD1Q16676 465 aa33■■■□□ 2.87
LINC01140-211ENST00000619924 MYO5BQ9ULV0 1848 aa32.98■■■□□ 2.87
LINC01140-211ENST00000619924 TMEM131LA2VDJ0 1609 aa32.96■■■□□ 2.87
LINC01140-211ENST00000619924 KIF1BO60333 1816 aa32.96■■■□□ 2.87
LINC01140-211ENST00000619924 SLC52A1Q9NWF4 448 aa32.95■■■□□ 2.87
LINC01140-211ENST00000619924 ANKRD30BQ9BXX2 1392 aa32.95■■■□□ 2.86
LINC01140-211ENST00000619924 AEBP2Q6ZN18 517 aaPredicted RBP32.92■■■□□ 2.86
LINC01140-211ENST00000619924 IDI1Q13907 227 aa32.9■■■□□ 2.86
LINC01140-211ENST00000619924 CCDC144AA2RUR9 1427 aa32.9■■■□□ 2.86
LINC01140-211ENST00000619924 NEURL4Q96JN8 1562 aa32.88■■■□□ 2.85
LINC01140-211ENST00000619924 SLIT1O75093 1534 aa32.82■■■□□ 2.85
LINC01140-211ENST00000619924 ARHGAP23Q9P227 1491 aa32.81■■■□□ 2.84
LINC01140-211ENST00000619924 POLR1AO95602 1720 aaPredicted RBP32.81■■■□□ 2.84
LINC01140-211ENST00000619924 SPATA31E1Q6ZUB1 1445 aa32.78■■■□□ 2.84
LINC01140-211ENST00000619924 IFT172Q9UG01 1749 aa32.76■■■□□ 2.83
LINC01140-211ENST00000619924 STRCQ7RTU9 1775 aa32.75■■■□□ 2.83
LINC01140-211ENST00000619924 ZFYVE9O95405 1425 aa32.74■■■□□ 2.83
LINC01140-211ENST00000619924 PPLO60437 1756 aa32.73■■■□□ 2.83
LINC01140-211ENST00000619924 TMEM2Q9UHN6 1383 aa32.73■■■□□ 2.83
LINC01140-211ENST00000619924 NEXMIFQ5QGS0 1516 aa32.73■■■□□ 2.83
LINC01140-211ENST00000619924 THEMISQ8N1K5 641 aaPredicted RBP32.72■■■□□ 2.83
LINC01140-211ENST00000619924 HSPA2P54652 639 aa32.71■■■□□ 2.83
LINC01140-211ENST00000619924 STAG3Q9UJ98 1225 aa32.7■■■□□ 2.83
LINC01140-211ENST00000619924 CHGAP10645 457 aaKnown RBP32.66■■■□□ 2.82
LINC01140-211ENST00000619924 RIMS2Q9UQ26 1411 aa32.66■■■□□ 2.82
LINC01140-211ENST00000619924 SCAF11Q99590 1463 aaKnown RBP32.66■■■□□ 2.82
LINC01140-211ENST00000619924 CLSPNQ9HAW4 1339 aa32.63■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms