RNA–Protein interactions for RNA: ENST00000619707.4

C9orf72-206, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-206ENST00000619707 CAMSAP2Q08AD1 1489 aa11.45□□□□□ -0.58
C9orf72-206ENST00000619707 ARHGEF12Q9NZN5 1544 aa11.44□□□□□ -0.58
C9orf72-206ENST00000619707 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.44□□□□□ -0.58
C9orf72-206ENST00000619707 PLIN1O60240 522 aa11.43□□□□□ -0.58
C9orf72-206ENST00000619707 CDCA7LQ96GN5 454 aa11.43□□□□□ -0.58
C9orf72-206ENST00000619707 KDM2AQ9Y2K7 1162 aa11.43□□□□□ -0.58
C9orf72-206ENST00000619707 CRBNQ96SW2 442 aa11.43□□□□□ -0.58
C9orf72-206ENST00000619707 E9PCH4 1651 aa11.43□□□□□ -0.58
C9orf72-206ENST00000619707 ANKRD30AQ9BXX3 1397 aa11.43□□□□□ -0.58
C9orf72-206ENST00000619707 PBRM1Q86U86 1689 aa11.43□□□□□ -0.58
C9orf72-206ENST00000619707 NFKBIBQ15653 356 aa11.42□□□□□ -0.58
C9orf72-206ENST00000619707 BRPF3Q9ULD4 1205 aa11.42□□□□□ -0.58
C9orf72-206ENST00000619707 ZNF777Q9ULD5 760 aaPredicted RBP11.42□□□□□ -0.58
C9orf72-206ENST00000619707 ADGRL2O95490 1459 aa11.42□□□□□ -0.58
C9orf72-206ENST00000619707 PARD3Q8TEW0 1356 aa11.42□□□□□ -0.58
C9orf72-206ENST00000619707 NUP153P49790 1475 aaKnown RBP11.42□□□□□ -0.58
C9orf72-206ENST00000619707 TARBP1Q13395 1621 aaKnown RBP11.42□□□□□ -0.58
C9orf72-206ENST00000619707 PDS5BQ9NTI5 1447 aa11.41□□□□□ -0.58
C9orf72-206ENST00000619707 SKAP1Q86WV1 359 aa11.41□□□□□ -0.58
C9orf72-206ENST00000619707 ANKRD50Q9ULJ7 1429 aa11.41□□□□□ -0.58
C9orf72-206ENST00000619707 ITSN2Q9NZM3 1697 aa11.41□□□□□ -0.58
C9orf72-206ENST00000619707 ADAMTS12P58397 1594 aa11.41□□□□□ -0.58
C9orf72-206ENST00000619707 DCAF11Q8TEB1 546 aa11.4□□□□□ -0.58
C9orf72-206ENST00000619707 NUP155O75694 1391 aa11.4□□□□□ -0.58
C9orf72-206ENST00000619707 RAPGEF6Q8TEU7 1601 aa11.39□□□□□ -0.59
C9orf72-206ENST00000619707 CROCC2H7BZ55 1655 aa11.39□□□□□ -0.59
C9orf72-206ENST00000619707 KIAA0586Q9BVV6 1533 aa11.39□□□□□ -0.59
C9orf72-206ENST00000619707 TROQ12816 1431 aaPredicted RBP11.39□□□□□ -0.59
C9orf72-206ENST00000619707 SLC4A3P48751 1232 aa11.39□□□□□ -0.59
C9orf72-206ENST00000619707 PRG4Q92954 1404 aaPredicted RBP11.38□□□□□ -0.59
C9orf72-206ENST00000619707 KIAA0556O60303 1618 aa11.38□□□□□ -0.59
C9orf72-206ENST00000619707 FRAT1Q92837 279 aaPredicted RBP11.38□□□□□ -0.59
C9orf72-206ENST00000619707 GPATCH8Q9UKJ3 1502 aaKnown RBP11.37□□□□□ -0.59
C9orf72-206ENST00000619707 INSRP06213 1382 aa11.37□□□□□ -0.59
C9orf72-206ENST00000619707 BLMP54132 1417 aaPredicted RBP11.37□□□□□ -0.59
C9orf72-206ENST00000619707 PLEKHH2Q8IVE3 1493 aa11.37□□□□□ -0.59
C9orf72-206ENST00000619707 CENPQQ7L2Z9 268 aaPredicted RBP11.37□□□□□ -0.59
C9orf72-206ENST00000619707 HAP1P54257 671 aaPredicted RBP11.36□□□□□ -0.59
C9orf72-206ENST00000619707 CC2D1BQ5T0F9 858 aaKnown RBP11.36□□□□□ -0.59
C9orf72-206ENST00000619707 DISP1Q96F81 1524 aa11.36□□□□□ -0.59
C9orf72-206ENST00000619707 FAM161AQ3B820 660 aa11.36□□□□□ -0.59
C9orf72-206ENST00000619707 HOMEZQ8IX15 550 aa11.36□□□□□ -0.59
C9orf72-206ENST00000619707 ZMYM4Q5VZL5 1548 aa11.36□□□□□ -0.59
C9orf72-206ENST00000619707 KDM2BQ8NHM5 1336 aa11.35□□□□□ -0.59
C9orf72-206ENST00000619707 PER1O15534 1290 aaPredicted RBP11.35□□□□□ -0.59
C9orf72-206ENST00000619707 C20orf194Q5TEA3 1177 aa11.35□□□□□ -0.59
C9orf72-206ENST00000619707 BCL11BQ9C0K0 894 aaPredicted RBP11.35□□□□□ -0.59
C9orf72-206ENST00000619707 A0A0U1RQG5 324 aaPredicted RBP11.34□□□□□ -0.59
C9orf72-206ENST00000619707 CEP170Q5SW79 1584 aa11.34□□□□□ -0.59
C9orf72-206ENST00000619707 DHX37Q8IY37 1157 aaKnown RBP11.34□□□□□ -0.59
C9orf72-206ENST00000619707 KDM5DQ9BY66 1539 aa11.32□□□□□ -0.6
C9orf72-206ENST00000619707 C9orf84Q5VXU9 1444 aa11.32□□□□□ -0.6
C9orf72-206ENST00000619707 C8orf34Q49A92 452 aa11.32□□□□□ -0.6
C9orf72-206ENST00000619707 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.32□□□□□ -0.6
C9orf72-206ENST00000619707 SHANK2Q9UPX8 1470 aa11.31□□□□□ -0.6
C9orf72-206ENST00000619707 ADCY10Q96PN6 1610 aa11.31□□□□□ -0.6
C9orf72-206ENST00000619707 PRAG1Q86YV5 1406 aa11.31□□□□□ -0.6
C9orf72-206ENST00000619707 FRAT2O75474 233 aaPredicted RBP11.31□□□□□ -0.6
C9orf72-206ENST00000619707 COL17A1Q9UMD9 1497 aaPredicted RBP11.31□□□□□ -0.6
C9orf72-206ENST00000619707 TSPY4P0CV99 314 aa11.3□□□□□ -0.6
C9orf72-206ENST00000619707 TSPY10P0CW01 314 aa11.3□□□□□ -0.6
C9orf72-206ENST00000619707 PANK3Q9H999 370 aa11.3□□□□□ -0.6
C9orf72-206ENST00000619707 TRPM1Q7Z4N2 1603 aa11.3□□□□□ -0.6
C9orf72-206ENST00000619707 ZNF608Q9ULD9 1512 aaPredicted RBP11.3□□□□□ -0.6
C9orf72-206ENST00000619707 RGS3P49796 1198 aa11.3□□□□□ -0.6
C9orf72-206ENST00000619707 NBPF1Q3BBV0 1214 aa11.29□□□□□ -0.6
C9orf72-206ENST00000619707 DISP3Q9P2K9 1392 aa11.29□□□□□ -0.6
C9orf72-206ENST00000619707 ADAMTS8Q9UP79 889 aa11.29□□□□□ -0.6
C9orf72-206ENST00000619707 WDR43Q15061 677 aaKnown RBP eCLIP11.28□□□□□ -0.6
C9orf72-206ENST00000619707 CCDC144AA2RUR9 1427 aa11.28□□□□□ -0.6
C9orf72-206ENST00000619707 PTPRGP23470 1445 aa11.28□□□□□ -0.6
C9orf72-206ENST00000619707 RGL3Q3MIN7 710 aa11.28□□□□□ -0.6
C9orf72-206ENST00000619707 CDC42BPAQ5VT25 1732 aa11.28□□□□□ -0.6
C9orf72-206ENST00000619707 PLB1Q6P1J6 1458 aa11.28□□□□□ -0.6
C9orf72-206ENST00000619707 DUSP27Q5VZP5 1158 aa11.27□□□□□ -0.6
C9orf72-206ENST00000619707 FAM43AQ8N2R8 423 aa11.27□□□□□ -0.6
C9orf72-206ENST00000619707 TMF1P82094 1093 aa11.27□□□□□ -0.61
C9orf72-206ENST00000619707 GPRASP1Q5JY77 1395 aa11.27□□□□□ -0.61
C9orf72-206ENST00000619707 ERBINQ96RT1 1412 aa11.27□□□□□ -0.61
C9orf72-206ENST00000619707 GOLGA2Q08379 1002 aa11.27□□□□□ -0.61
C9orf72-206ENST00000619707 C14orf37Q86TY3 774 aa11.27□□□□□ -0.61
C9orf72-206ENST00000619707 TESK2Q96S53 571 aa11.26□□□□□ -0.61
C9orf72-206ENST00000619707 RSPH6AQ9H0K4 717 aa11.26□□□□□ -0.61
C9orf72-206ENST00000619707 EIF4G3O43432 1585 aaKnown RBP11.26□□□□□ -0.61
C9orf72-206ENST00000619707 PLEKHH1Q9ULM0 1364 aa11.25□□□□□ -0.61
C9orf72-206ENST00000619707 FAM135AQ9P2D6 1515 aa11.25□□□□□ -0.61
C9orf72-206ENST00000619707 PLEKHD1A6NEE1 506 aa11.25□□□□□ -0.61
C9orf72-206ENST00000619707 PRDM15P57071 1507 aaPredicted RBP11.25□□□□□ -0.61
C9orf72-206ENST00000619707 LAMC1P11047 1609 aa11.24□□□□□ -0.61
C9orf72-206ENST00000619707 GRIN2AQ12879 1464 aa11.23□□□□□ -0.61
C9orf72-206ENST00000619707 EIF3AQ14152 1382 aaKnown RBP11.23□□□□□ -0.61
C9orf72-206ENST00000619707 CHMP4AQ9BY43 222 aa11.23□□□□□ -0.61
C9orf72-206ENST00000619707 KNSTRNQ9Y448 316 aa11.23□□□□□ -0.61
C9orf72-206ENST00000619707 ZNF521Q96K83 1311 aa11.22□□□□□ -0.61
C9orf72-206ENST00000619707 PPP2R1AP30153 589 aa11.22□□□□□ -0.61
C9orf72-206ENST00000619707 HNRNPMP52272 730 aaKnown RBP eCLIP11.22□□□□□ -0.61
C9orf72-206ENST00000619707 A2MP01023 1474 aa11.22□□□□□ -0.61
C9orf72-206ENST00000619707 BECN1Q14457 450 aa11.22□□□□□ -0.61
C9orf72-206ENST00000619707 EIF2AK4Q9P2K8 1649 aaKnown RBP11.21□□□□□ -0.61
C9orf72-206ENST00000619707 SLFN5Q08AF3 891 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms