RNA–Protein interactions for RNA: ENST00000619640.3

C2orf48-202, Transcript of chromosome 2 open reading frame 48, humanhuman

TSL 1 (best)

Gene C2orf48, Length 480 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf48-202ENST00000619640 CNTLNQ9NXG0 1405 aa23.3■■□□□ 1.32
C2orf48-202ENST00000619640 DEPDC5O75140 1603 aa23.28■■□□□ 1.32
C2orf48-202ENST00000619640 MROH2AA6NES4 1674 aa23.28■■□□□ 1.32
C2orf48-202ENST00000619640 ANKRD50Q9ULJ7 1429 aa23.27■■□□□ 1.32
C2orf48-202ENST00000619640 GGT6Q6P531 493 aa23.27■■□□□ 1.32
C2orf48-202ENST00000619640 ITGAEP38570 1179 aa23.26■■□□□ 1.31
C2orf48-202ENST00000619640 PRDM15P57071 1507 aaPredicted RBP23.26■■□□□ 1.31
C2orf48-202ENST00000619640 KDM5DQ9BY66 1539 aa23.25■■□□□ 1.31
C2orf48-202ENST00000619640 CLTCQ00610 1675 aaKnown RBP23.24■■□□□ 1.31
C2orf48-202ENST00000619640 C3P01024 1663 aa23.22■■□□□ 1.31
C2orf48-202ENST00000619640 AEBP2Q6ZN18 517 aaPredicted RBP23.22■■□□□ 1.31
C2orf48-202ENST00000619640 ZC3H13Q5T200 1668 aaKnown RBP23.22■■□□□ 1.31
C2orf48-202ENST00000619640 VWDEQ8N2E2 1590 aa23.2■■□□□ 1.3
C2orf48-202ENST00000619640 ABCC3O15438 1527 aa23.2■■□□□ 1.3
C2orf48-202ENST00000619640 NAIPQ13075 1403 aa23.2■■□□□ 1.3
C2orf48-202ENST00000619640 GCC2Q8IWJ2 1684 aa23.19■■□□□ 1.3
C2orf48-202ENST00000619640 ESF1Q9H501 851 aaKnown RBP23.19■■□□□ 1.3
C2orf48-202ENST00000619640 HFM1A2PYH4 1435 aa23.18■■□□□ 1.3
C2orf48-202ENST00000619640 ZMYM3Q14202 1370 aa23.18■■□□□ 1.3
C2orf48-202ENST00000619640 UNC13BO14795 1591 aa23.18■■□□□ 1.3
C2orf48-202ENST00000619640 WASHC2CQ9Y4E1 1318 aa23.15■■□□□ 1.3
C2orf48-202ENST00000619640 LMTK2Q8IWU2 1503 aa23.15■■□□□ 1.3
C2orf48-202ENST00000619640 CEBPAP49715 358 aaPredicted RBP23.14■■□□□ 1.29
C2orf48-202ENST00000619640 CEP152O94986 1710 aa23.13■■□□□ 1.29
C2orf48-202ENST00000619640 NPATQ14207 1427 aa23.13■■□□□ 1.29
C2orf48-202ENST00000619640 PZPP20742 1482 aa23.12■■□□□ 1.29
C2orf48-202ENST00000619640 CAMSAP1Q5T5Y3 1602 aa23.11■■□□□ 1.29
C2orf48-202ENST00000619640 KANK1Q14678 1352 aa23.1■■□□□ 1.29
C2orf48-202ENST00000619640 ARHGAP31Q2M1Z3 1444 aa23.09■■□□□ 1.29
C2orf48-202ENST00000619640 SETD1BQ9UPS6 1966 aaKnown RBP23.09■■□□□ 1.29
C2orf48-202ENST00000619640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.07■■□□□ 1.285e-7■■■■■ 27.1
C2orf48-202ENST00000619640 IQGAP3Q86VI3 1631 aa23.07■■□□□ 1.28
C2orf48-202ENST00000619640 PREX1Q8TCU6 1659 aa23.06■■□□□ 1.28
C2orf48-202ENST00000619640 EFCAB6Q5THR3 1501 aa23.05■■□□□ 1.28
C2orf48-202ENST00000619640 PLPPR3Q6T4P5 718 aa23.04■■□□□ 1.28
C2orf48-202ENST00000619640 LMTK3Q96Q04 1460 aa23.04■■□□□ 1.28
C2orf48-202ENST00000619640 TET3O43151 1660 aa23.03■■□□□ 1.28
C2orf48-202ENST00000619640 SPATA31D1Q6ZQQ2 1576 aa23.03■■□□□ 1.28
C2orf48-202ENST00000619640 NUP155O75694 1391 aa23.01■■□□□ 1.27
C2orf48-202ENST00000619640 ERVK-7P63135 1459 aa23■■□□□ 1.27
C2orf48-202ENST00000619640 FBXO31Q5XUX0 539 aaPredicted RBP23■■□□□ 1.27
C2orf48-202ENST00000619640 RPRD2Q5VT52 1461 aaKnown RBP22.98■■□□□ 1.27
C2orf48-202ENST00000619640 MYO3AQ8NEV4 1616 aa22.98■■□□□ 1.27
C2orf48-202ENST00000619640 UHRF1BP1Q6BDS2 1440 aa22.98■■□□□ 1.27
C2orf48-202ENST00000619640 SETD5Q9C0A6 1442 aa22.98■■□□□ 1.27
C2orf48-202ENST00000619640 TNRQ92752 1358 aa22.97■■□□□ 1.27
C2orf48-202ENST00000619640 ZNF142P52746 1687 aaPredicted RBP22.96■■□□□ 1.27
C2orf48-202ENST00000619640 ACIN1Q9UKV3 1341 aaKnown RBP22.95■■□□□ 1.26
C2orf48-202ENST00000619640 E9PCH4 1651 aa22.94■■□□□ 1.26
C2orf48-202ENST00000619640 NOS1P29475 1434 aa22.94■■□□□ 1.26
C2orf48-202ENST00000619640 TRIM26Q12899 539 aaPredicted RBP22.94■■□□□ 1.26
C2orf48-202ENST00000619640 CEP170BQ9Y4F5 1589 aaPredicted RBP22.93■■□□□ 1.26
C2orf48-202ENST00000619640 NLRP1Q9C000 1473 aa22.92■■□□□ 1.26
C2orf48-202ENST00000619640 A2ML1A8K2U0 1454 aa22.91■■□□□ 1.26
C2orf48-202ENST00000619640 CFAP65Q6ZU64 1925 aaKnown RBP22.9■■□□□ 1.26
C2orf48-202ENST00000619640 RAB3GAP2Q9H2M9 1393 aa22.9■■□□□ 1.26
C2orf48-202ENST00000619640 SYNMO15061 1565 aa22.89■■□□□ 1.26
C2orf48-202ENST00000619640 HRCP23327 699 aa22.87■■□□□ 1.25
C2orf48-202ENST00000619640 HSPA2P54652 639 aa22.84■■□□□ 1.25
C2orf48-202ENST00000619640 TRIM52Q96A61 297 aa22.84■■□□□ 1.25
C2orf48-202ENST00000619640 PTPRTO14522 1441 aa22.83■■□□□ 1.25
C2orf48-202ENST00000619640 PIK3C2BO00750 1634 aa22.82■■□□□ 1.24
C2orf48-202ENST00000619640 KDM5AP29375 1690 aaKnown RBP22.81■■□□□ 1.24
C2orf48-202ENST00000619640 UGGT1Q9NYU2 1555 aa22.8■■□□□ 1.24
C2orf48-202ENST00000619640 PLA2R1Q13018 1463 aa22.8■■□□□ 1.24
C2orf48-202ENST00000619640 SPHKAPQ2M3C7 1700 aa22.8■■□□□ 1.24
C2orf48-202ENST00000619640 SLC52A1Q9NWF4 448 aa22.8■■□□□ 1.24
C2orf48-202ENST00000619640 UBR1Q8IWV7 1749 aa22.79■■□□□ 1.24
C2orf48-202ENST00000619640 SLC4A1APQ9BWU0 796 aaKnown RBP22.79■■□□□ 1.24
C2orf48-202ENST00000619640 IDI1Q13907 227 aa22.78■■□□□ 1.24
C2orf48-202ENST00000619640 STRCQ7RTU9 1775 aa22.77■■□□□ 1.24
C2orf48-202ENST00000619640 PKD2Q13563 968 aa22.77■■□□□ 1.24
C2orf48-202ENST00000619640 TRPM2O94759 1503 aa22.77■■□□□ 1.24
C2orf48-202ENST00000619640 MPHOSPH9Q99550 1183 aa22.76■■□□□ 1.23
C2orf48-202ENST00000619640 ADGRB3O60242 1522 aa22.75■■□□□ 1.23
C2orf48-202ENST00000619640 THEMISQ8N1K5 641 aaPredicted RBP22.74■■□□□ 1.23
C2orf48-202ENST00000619640 ARHGAP23Q9P227 1491 aa22.73■■□□□ 1.23
C2orf48-202ENST00000619640 SLIT1O75093 1534 aa22.72■■□□□ 1.23
C2orf48-202ENST00000619640 TMEM131LA2VDJ0 1609 aa22.71■■□□□ 1.23
C2orf48-202ENST00000619640 CLTCL1P53675 1640 aa22.69■■□□□ 1.22
C2orf48-202ENST00000619640 POLR1AO95602 1720 aaPredicted RBP22.67■■□□□ 1.22
C2orf48-202ENST00000619640 NEURL4Q96JN8 1562 aa22.67■■□□□ 1.22
C2orf48-202ENST00000619640 TMEM2Q9UHN6 1383 aa22.65■■□□□ 1.22
C2orf48-202ENST00000619640 FOXD1Q16676 465 aa22.65■■□□□ 1.22
C2orf48-202ENST00000619640 MED14O60244 1454 aa22.65■■□□□ 1.22
C2orf48-202ENST00000619640 MYO5BQ9ULV0 1848 aa22.64■■□□□ 1.22
C2orf48-202ENST00000619640 NCKAP5LQ9HCH0 1330 aa22.62■■□□□ 1.21
C2orf48-202ENST00000619640 ANKLE2Q86XL3 938 aa22.62■■□□□ 1.21
C2orf48-202ENST00000619640 ZFYVE9O95405 1425 aa22.62■■□□□ 1.21
C2orf48-202ENST00000619640 STAG3Q9UJ98 1225 aa22.61■■□□□ 1.21
C2orf48-202ENST00000619640 DMRT2Q9Y5R5 561 aa22.61■■□□□ 1.21
C2orf48-202ENST00000619640 SCAF11Q99590 1463 aaKnown RBP22.6■■□□□ 1.21
C2orf48-202ENST00000619640 LTKP29376 864 aa22.59■■□□□ 1.21
C2orf48-202ENST00000619640 ANKRD30BQ9BXX2 1392 aa22.59■■□□□ 1.21
C2orf48-202ENST00000619640 KIF1BO60333 1816 aa22.59■■□□□ 1.21
C2orf48-202ENST00000619640 PCGF6Q9BYE7 350 aa22.58■■□□□ 1.21
C2orf48-202ENST00000619640 CCDC144AA2RUR9 1427 aa22.57■■□□□ 1.2
C2orf48-202ENST00000619640 RIMS2Q9UQ26 1411 aa22.56■■□□□ 1.2
C2orf48-202ENST00000619640 TXNDC2Q86VQ3 553 aa22.55■■□□□ 1.2
C2orf48-202ENST00000619640 NPHP4O75161 1426 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms