RNA–Protein interactions for RNA: ENST00000619449.1

MALAT1-215, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 794 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-215ENST00000619449 RIMS1Q86UR5 1692 aaKnown RBP27.64■■■□□ 2.02
MALAT1-215ENST00000619449 PPP6R1Q9UPN7 881 aa27.62■■■□□ 2.01
MALAT1-215ENST00000619449 MROH1Q8NDA8 1641 aa27.62■■■□□ 2.01
MALAT1-215ENST00000619449 GGT6Q6P531 493 aa27.6■■■□□ 2.01
MALAT1-215ENST00000619449 ANKRD50Q9ULJ7 1429 aa27.58■■■□□ 2.01
MALAT1-215ENST00000619449 DEPDC5O75140 1603 aa27.58■■■□□ 2.01
MALAT1-215ENST00000619449 CNTLNQ9NXG0 1405 aa27.58■■■□□ 2
MALAT1-215ENST00000619449 FAM135AQ9P2D6 1515 aa27.57■■■□□ 2
MALAT1-215ENST00000619449 PRDM15P57071 1507 aaPredicted RBP27.55■■■□□ 2
MALAT1-215ENST00000619449 MROH2AA6NES4 1674 aa27.54■■■□□ 2
MALAT1-215ENST00000619449 KDM5DQ9BY66 1539 aa27.54■■■□□ 2
MALAT1-215ENST00000619449 CLTCQ00610 1675 aaKnown RBP27.52■■■□□ 2
MALAT1-215ENST00000619449 NAIPQ13075 1403 aa27.52■■■□□ 2
MALAT1-215ENST00000619449 VWDEQ8N2E2 1590 aa27.5■■□□□ 1.99
MALAT1-215ENST00000619449 HFM1A2PYH4 1435 aa27.5■■□□□ 1.99
MALAT1-215ENST00000619449 C3P01024 1663 aa27.49■■□□□ 1.99
MALAT1-215ENST00000619449 ZMYM3Q14202 1370 aa27.48■■□□□ 1.99
MALAT1-215ENST00000619449 ABCC3O15438 1527 aa27.48■■□□□ 1.99
MALAT1-215ENST00000619449 GCC2Q8IWJ2 1684 aa27.48■■□□□ 1.99
MALAT1-215ENST00000619449 ZC3H13Q5T200 1668 aaKnown RBP27.46■■□□□ 1.99
MALAT1-215ENST00000619449 CEBPAP49715 358 aaPredicted RBP27.46■■□□□ 1.99
MALAT1-215ENST00000619449 ESF1Q9H501 851 aaKnown RBP27.46■■□□□ 1.99
MALAT1-215ENST00000619449 UNC13BO14795 1591 aa27.45■■□□□ 1.99
MALAT1-215ENST00000619449 WASHC2CQ9Y4E1 1318 aa27.44■■□□□ 1.98
MALAT1-215ENST00000619449 LMTK2Q8IWU2 1503 aa27.42■■□□□ 1.98
MALAT1-215ENST00000619449 CEP152O94986 1710 aa27.41■■□□□ 1.98
MALAT1-215ENST00000619449 PZPP20742 1482 aa27.38■■□□□ 1.97
MALAT1-215ENST00000619449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.38■■□□□ 1.97
MALAT1-215ENST00000619449 NPATQ14207 1427 aa27.37■■□□□ 1.97
MALAT1-215ENST00000619449 CAMSAP1Q5T5Y3 1602 aa27.37■■□□□ 1.97
MALAT1-215ENST00000619449 KANK1Q14678 1352 aa27.36■■□□□ 1.97
MALAT1-215ENST00000619449 ARHGAP31Q2M1Z3 1444 aa27.36■■□□□ 1.97
MALAT1-215ENST00000619449 PLPPR3Q6T4P5 718 aa27.33■■□□□ 1.97
MALAT1-215ENST00000619449 IQGAP3Q86VI3 1631 aa27.33■■□□□ 1.97
MALAT1-215ENST00000619449 SETD1BQ9UPS6 1966 aaKnown RBP27.33■■□□□ 1.97
MALAT1-215ENST00000619449 EFCAB6Q5THR3 1501 aa27.3■■□□□ 1.96
MALAT1-215ENST00000619449 FBXO31Q5XUX0 539 aaPredicted RBP27.29■■□□□ 1.96
MALAT1-215ENST00000619449 TET3O43151 1660 aa27.28■■□□□ 1.96
MALAT1-215ENST00000619449 NUP155O75694 1391 aa27.28■■□□□ 1.96
MALAT1-215ENST00000619449 SPATA31D1Q6ZQQ2 1576 aa27.27■■□□□ 1.96
MALAT1-215ENST00000619449 LMTK3Q96Q04 1460 aa27.27■■□□□ 1.96
MALAT1-215ENST00000619449 SETD5Q9C0A6 1442 aa27.27■■□□□ 1.96
MALAT1-215ENST00000619449 PREX1Q8TCU6 1659 aa27.27■■□□□ 1.96
MALAT1-215ENST00000619449 ERVK-7P63135 1459 aa27.25■■□□□ 1.95
MALAT1-215ENST00000619449 RPRD2Q5VT52 1461 aaKnown RBP27.22■■□□□ 1.95
MALAT1-215ENST00000619449 TNRQ92752 1358 aa27.21■■□□□ 1.95
MALAT1-215ENST00000619449 NOS1P29475 1434 aa27.2■■□□□ 1.94
MALAT1-215ENST00000619449 UHRF1BP1Q6BDS2 1440 aa27.2■■□□□ 1.94
MALAT1-215ENST00000619449 MYO3AQ8NEV4 1616 aa27.19■■□□□ 1.94
MALAT1-215ENST00000619449 E9PCH4 1651 aa27.19■■□□□ 1.94
MALAT1-215ENST00000619449 RAB3GAP2Q9H2M9 1393 aa27.19■■□□□ 1.94
MALAT1-215ENST00000619449 ZNF142P52746 1687 aaPredicted RBP27.17■■□□□ 1.94
MALAT1-215ENST00000619449 CFAP65Q6ZU64 1925 aaKnown RBP27.16■■□□□ 1.94
MALAT1-215ENST00000619449 HRCP23327 699 aa27.14■■□□□ 1.94
MALAT1-215ENST00000619449 SYNMO15061 1565 aa27.14■■□□□ 1.93
MALAT1-215ENST00000619449 CEP170BQ9Y4F5 1589 aaPredicted RBP27.14■■□□□ 1.93
MALAT1-215ENST00000619449 NLRP1Q9C000 1473 aa27.13■■□□□ 1.93
MALAT1-215ENST00000619449 TRIM26Q12899 539 aaPredicted RBP27.13■■□□□ 1.93
MALAT1-215ENST00000619449 ACIN1Q9UKV3 1341 aaKnown RBP27.13■■□□□ 1.93
MALAT1-215ENST00000619449 A2ML1A8K2U0 1454 aa27.13■■□□□ 1.93
MALAT1-215ENST00000619449 TRIM52Q96A61 297 aa27.11■■□□□ 1.93
MALAT1-215ENST00000619449 PTPRTO14522 1441 aa27.07■■□□□ 1.92
MALAT1-215ENST00000619449 HSPA2P54652 639 aa27.07■■□□□ 1.92
MALAT1-215ENST00000619449 PIK3C2BO00750 1634 aa27.05■■□□□ 1.92
MALAT1-215ENST00000619449 SLC4A1APQ9BWU0 796 aaKnown RBP27.04■■□□□ 1.92
MALAT1-215ENST00000619449 PKD2Q13563 968 aa27.03■■□□□ 1.92
MALAT1-215ENST00000619449 MPHOSPH9Q99550 1183 aa27.03■■□□□ 1.92
MALAT1-215ENST00000619449 PLA2R1Q13018 1463 aa27.02■■□□□ 1.92
MALAT1-215ENST00000619449 IDI1Q13907 227 aa27.02■■□□□ 1.92
MALAT1-215ENST00000619449 UGGT1Q9NYU2 1555 aa27.01■■□□□ 1.92
MALAT1-215ENST00000619449 SLC52A1Q9NWF4 448 aa27.01■■□□□ 1.91
MALAT1-215ENST00000619449 SPHKAPQ2M3C7 1700 aa27.01■■□□□ 1.91
MALAT1-215ENST00000619449 UBR1Q8IWV7 1749 aa27■■□□□ 1.91
MALAT1-215ENST00000619449 KDM5AP29375 1690 aaKnown RBP26.98■■□□□ 1.91
MALAT1-215ENST00000619449 TRPM2O94759 1503 aa26.97■■□□□ 1.91
MALAT1-215ENST00000619449 STRCQ7RTU9 1775 aa26.97■■□□□ 1.91
MALAT1-215ENST00000619449 THEMISQ8N1K5 641 aaPredicted RBP26.93■■□□□ 1.9
MALAT1-215ENST00000619449 ADGRB3O60242 1522 aa26.93■■□□□ 1.9
MALAT1-215ENST00000619449 FOXD1Q16676 465 aa26.92■■□□□ 1.9
MALAT1-215ENST00000619449 ARHGAP23Q9P227 1491 aa26.92■■□□□ 1.9
MALAT1-215ENST00000619449 TMEM131LA2VDJ0 1609 aa26.91■■□□□ 1.9
MALAT1-215ENST00000619449 SLIT1O75093 1534 aa26.9■■□□□ 1.9
MALAT1-215ENST00000619449 CLTCL1P53675 1640 aa26.9■■□□□ 1.9
MALAT1-215ENST00000619449 MYO5BQ9ULV0 1848 aa26.85■■□□□ 1.89
MALAT1-215ENST00000619449 TMEM2Q9UHN6 1383 aa26.84■■□□□ 1.89
MALAT1-215ENST00000619449 NEURL4Q96JN8 1562 aa26.84■■□□□ 1.89
MALAT1-215ENST00000619449 NCKAP5LQ9HCH0 1330 aa26.83■■□□□ 1.89
MALAT1-215ENST00000619449 POLR1AO95602 1720 aaPredicted RBP26.82■■□□□ 1.88
MALAT1-215ENST00000619449 MED14O60244 1454 aa26.81■■□□□ 1.88
MALAT1-215ENST00000619449 ANKRD30BQ9BXX2 1392 aa26.81■■□□□ 1.88
MALAT1-215ENST00000619449 ZFYVE9O95405 1425 aa26.81■■□□□ 1.88
MALAT1-215ENST00000619449 STAG3Q9UJ98 1225 aa26.8■■□□□ 1.88
MALAT1-215ENST00000619449 LTKP29376 864 aa26.79■■□□□ 1.88
MALAT1-215ENST00000619449 ANKLE2Q86XL3 938 aa26.79■■□□□ 1.88
MALAT1-215ENST00000619449 SCAF11Q99590 1463 aaKnown RBP26.77■■□□□ 1.88
MALAT1-215ENST00000619449 CCDC144AA2RUR9 1427 aa26.76■■□□□ 1.87
MALAT1-215ENST00000619449 KIF1BO60333 1816 aa26.76■■□□□ 1.87
MALAT1-215ENST00000619449 DMRT2Q9Y5R5 561 aa26.75■■□□□ 1.87
MALAT1-215ENST00000619449 SPATA31E1Q6ZUB1 1445 aa26.73■■□□□ 1.87
MALAT1-215ENST00000619449 RIMS2Q9UQ26 1411 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms