RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 ARID4BQ4LE39 1312 aaPredicted RBP23.65■■□□□ 1.38
MALAT1-213ENST00000618227 FAM135AQ9P2D6 1515 aa23.6■■□□□ 1.37
MALAT1-213ENST00000618227 RNF17Q9BXT8 1623 aaKnown RBP23.6■■□□□ 1.37
MALAT1-213ENST00000618227 SIGLEC1Q9BZZ2 1709 aa23.59■■□□□ 1.37
MALAT1-213ENST00000618227 GGT6Q6P531 493 aa23.57■■□□□ 1.36
MALAT1-213ENST00000618227 DEPDC5O75140 1603 aa23.57■■□□□ 1.36
MALAT1-213ENST00000618227 RAB3GAP2Q9H2M9 1393 aa23.56■■□□□ 1.36
MALAT1-213ENST00000618227 KANK1Q14678 1352 aa23.55■■□□□ 1.36
MALAT1-213ENST00000618227 PRDM15P57071 1507 aaPredicted RBP23.54■■□□□ 1.36
MALAT1-213ENST00000618227 KDM5DQ9BY66 1539 aa23.54■■□□□ 1.36
MALAT1-213ENST00000618227 PCGF6Q9BYE7 350 aa23.54■■□□□ 1.36
MALAT1-213ENST00000618227 UNC13BO14795 1591 aa23.53■■□□□ 1.36
MALAT1-213ENST00000618227 CNTLNQ9NXG0 1405 aa23.53■■□□□ 1.36
MALAT1-213ENST00000618227 VWDEQ8N2E2 1590 aa23.52■■□□□ 1.36
MALAT1-213ENST00000618227 MROH1Q8NDA8 1641 aa23.51■■□□□ 1.35
MALAT1-213ENST00000618227 MLECQ14165 292 aa23.5■■□□□ 1.35
MALAT1-213ENST00000618227 WASHC2CQ9Y4E1 1318 aa23.5■■□□□ 1.35
MALAT1-213ENST00000618227 NUP155O75694 1391 aa23.5■■□□□ 1.35
MALAT1-213ENST00000618227 ESF1Q9H501 851 aaKnown RBP23.49■■□□□ 1.35
MALAT1-213ENST00000618227 LMTK2Q8IWU2 1503 aa23.49■■□□□ 1.35
MALAT1-213ENST00000618227 ADAMTSL3P82987 1691 aa23.48■■□□□ 1.35
MALAT1-213ENST00000618227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.48■■□□□ 1.35
MALAT1-213ENST00000618227 ZC3H13Q5T200 1668 aaKnown RBP23.45■■□□□ 1.34
MALAT1-213ENST00000618227 ABCC3O15438 1527 aa23.45■■□□□ 1.34
MALAT1-213ENST00000618227 TRIM52Q96A61 297 aa23.45■■□□□ 1.34
MALAT1-213ENST00000618227 IQGAP3Q86VI3 1631 aa23.44■■□□□ 1.34
MALAT1-213ENST00000618227 ARHGAP31Q2M1Z3 1444 aa23.43■■□□□ 1.34
MALAT1-213ENST00000618227 ZMYM3Q14202 1370 aa23.4■■□□□ 1.34
MALAT1-213ENST00000618227 MROH2AA6NES4 1674 aa23.39■■□□□ 1.34
MALAT1-213ENST00000618227 PZPP20742 1482 aa23.39■■□□□ 1.34
MALAT1-213ENST00000618227 KDM4FA0A1W2PPD8 638 aa23.39■■□□□ 1.33
MALAT1-213ENST00000618227 MPHOSPH9Q99550 1183 aa23.38■■□□□ 1.33
MALAT1-213ENST00000618227 FER1L4A9Z1Z3 1794 aa23.37■■□□□ 1.33
MALAT1-213ENST00000618227 MADDQ8WXG6 1647 aa23.37■■□□□ 1.33
MALAT1-213ENST00000618227 RPRD2Q5VT52 1461 aaKnown RBP23.37■■□□□ 1.33
MALAT1-213ENST00000618227 SLC4A1APQ9BWU0 796 aaKnown RBP23.37■■□□□ 1.33
MALAT1-213ENST00000618227 TET3O43151 1660 aa23.36■■□□□ 1.33
MALAT1-213ENST00000618227 EFCAB6Q5THR3 1501 aa23.35■■□□□ 1.33
MALAT1-213ENST00000618227 CLTCQ00610 1675 aaKnown RBP23.35■■□□□ 1.33
MALAT1-213ENST00000618227 PTPRMP28827 1452 aa23.32■■□□□ 1.32
MALAT1-213ENST00000618227 CAMSAP1Q5T5Y3 1602 aa23.32■■□□□ 1.32
MALAT1-213ENST00000618227 NPATQ14207 1427 aa23.32■■□□□ 1.32
MALAT1-213ENST00000618227 CEP152O94986 1710 aa23.31■■□□□ 1.32
MALAT1-213ENST00000618227 PKD2Q13563 968 aa23.31■■□□□ 1.32
MALAT1-213ENST00000618227 RIMS1Q86UR5 1692 aaKnown RBP23.29■■□□□ 1.32
MALAT1-213ENST00000618227 PTPRTO14522 1441 aa23.26■■□□□ 1.31
MALAT1-213ENST00000618227 NOS1P29475 1434 aa23.26■■□□□ 1.31
MALAT1-213ENST00000618227 C3P01024 1663 aa23.25■■□□□ 1.31
MALAT1-213ENST00000618227 CEBPAP49715 358 aaPredicted RBP23.24■■□□□ 1.31
MALAT1-213ENST00000618227 E9PCH4 1651 aa23.24■■□□□ 1.31
MALAT1-213ENST00000618227 ERVK-7P63135 1459 aa23.24■■□□□ 1.31
MALAT1-213ENST00000618227 SPATA31D1Q6ZQQ2 1576 aa23.23■■□□□ 1.31
MALAT1-213ENST00000618227 FBXO31Q5XUX0 539 aaPredicted RBP23.23■■□□□ 1.31
MALAT1-213ENST00000618227 DHX57Q6P158 1386 aaKnown RBP23.23■■□□□ 1.31
MALAT1-213ENST00000618227 SLC52A1Q9NWF4 448 aa23.22■■□□□ 1.31
MALAT1-213ENST00000618227 TNRQ92752 1358 aa23.2■■□□□ 1.3
MALAT1-213ENST00000618227 ANKRD30BQ9BXX2 1392 aa23.18■■□□□ 1.3
MALAT1-213ENST00000618227 PREX1Q8TCU6 1659 aa23.18■■□□□ 1.3
MALAT1-213ENST00000618227 PLA2R1Q13018 1463 aa23.17■■□□□ 1.3
MALAT1-213ENST00000618227 SETD1BQ9UPS6 1966 aaKnown RBP23.16■■□□□ 1.3
MALAT1-213ENST00000618227 NLRP1Q9C000 1473 aa23.16■■□□□ 1.3
MALAT1-213ENST00000618227 CLSPNQ9HAW4 1339 aa23.15■■□□□ 1.3
MALAT1-213ENST00000618227 TRPM2O94759 1503 aa23.15■■□□□ 1.3
MALAT1-213ENST00000618227 FOXD1Q16676 465 aa23.14■■□□□ 1.29
MALAT1-213ENST00000618227 SPHKAPQ2M3C7 1700 aa23.12■■□□□ 1.29
MALAT1-213ENST00000618227 SYNMO15061 1565 aa23.11■■□□□ 1.29
MALAT1-213ENST00000618227 IDI1Q13907 227 aa23.1■■□□□ 1.29
MALAT1-213ENST00000618227 CCDC144AA2RUR9 1427 aa23.09■■□□□ 1.29
MALAT1-213ENST00000618227 PLPPR3Q6T4P5 718 aa23.09■■□□□ 1.29
MALAT1-213ENST00000618227 PIK3C2BO00750 1634 aa23.08■■□□□ 1.29
MALAT1-213ENST00000618227 UHRF1BP1Q6BDS2 1440 aa23.07■■□□□ 1.28
MALAT1-213ENST00000618227 A2ML1A8K2U0 1454 aa23.06■■□□□ 1.28
MALAT1-213ENST00000618227 CFAP65Q6ZU64 1925 aaKnown RBP23.06■■□□□ 1.28
MALAT1-213ENST00000618227 KDM5AP29375 1690 aaKnown RBP23.03■■□□□ 1.28
MALAT1-213ENST00000618227 NEURL4Q96JN8 1562 aa23.03■■□□□ 1.28
MALAT1-213ENST00000618227 MYO3AQ8NEV4 1616 aa23.02■■□□□ 1.28
MALAT1-213ENST00000618227 THEMISQ8N1K5 641 aaPredicted RBP23.02■■□□□ 1.28
MALAT1-213ENST00000618227 CLTCL1P53675 1640 aa23.01■■□□□ 1.27
MALAT1-213ENST00000618227 CCER1Q8TC90 406 aaPredicted RBP23.01■■□□□ 1.27
MALAT1-213ENST00000618227 UGGT1Q9NYU2 1555 aa23■■□□□ 1.27
MALAT1-213ENST00000618227 CEP170BQ9Y4F5 1589 aaPredicted RBP23■■□□□ 1.27
MALAT1-213ENST00000618227 ZNF142P52746 1687 aaPredicted RBP23■■□□□ 1.27
MALAT1-213ENST00000618227 STAG3Q9UJ98 1225 aa22.99■■□□□ 1.27
MALAT1-213ENST00000618227 SPATA31E1Q6ZUB1 1445 aa22.98■■□□□ 1.27
MALAT1-213ENST00000618227 ADGRB3O60242 1522 aa22.98■■□□□ 1.27
MALAT1-213ENST00000618227 RPGRIP1LQ68CZ1 1315 aa22.97■■□□□ 1.27
MALAT1-213ENST00000618227 TMEM131LA2VDJ0 1609 aa22.96■■□□□ 1.27
MALAT1-213ENST00000618227 HDGFP51858 240 aaKnown RBP22.95■■□□□ 1.26
MALAT1-213ENST00000618227 POTEDQ86YR6 584 aa22.95■■□□□ 1.26
MALAT1-213ENST00000618227 STAC3Q96MF2 364 aa22.95■■□□□ 1.26
MALAT1-213ENST00000618227 LMTK3Q96Q04 1460 aa22.94■■□□□ 1.26
MALAT1-213ENST00000618227 TIMELESSQ9UNS1 1208 aa22.93■■□□□ 1.26
MALAT1-213ENST00000618227 UBR1Q8IWV7 1749 aa22.93■■□□□ 1.26
MALAT1-213ENST00000618227 KIF1BO60333 1816 aa22.92■■□□□ 1.26
MALAT1-213ENST00000618227 CHGAP10645 457 aaKnown RBP22.92■■□□□ 1.26
MALAT1-213ENST00000618227 SIN3AQ96ST3 1273 aa22.92■■□□□ 1.26
MALAT1-213ENST00000618227 ARHGAP23Q9P227 1491 aa22.92■■□□□ 1.26
MALAT1-213ENST00000618227 TMEM2Q9UHN6 1383 aa22.91■■□□□ 1.26
MALAT1-213ENST00000618227 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.91■■□□□ 1.26
MALAT1-213ENST00000618227 SLIT1O75093 1534 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms