RNA–Protein interactions for RNA: ENST00000618159.1

PSMB3-210, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-210ENST00000618159 DEPDC5O75140 1603 aa15.14■□□□□ 0.01
PSMB3-210ENST00000618159 RGS17Q9UGC6 210 aaPredicted RBP15.13■□□□□ 0.01
PSMB3-210ENST00000618159 PLEKHH2Q8IVE3 1493 aa15.13■□□□□ 0.01
PSMB3-210ENST00000618159 IQGAP1P46940 1657 aa15.12■□□□□ 0.01
PSMB3-210ENST00000618159 TNRQ92752 1358 aa15.12■□□□□ 0.01
PSMB3-210ENST00000618159 RNF17Q9BXT8 1623 aaKnown RBP15.12■□□□□ 0.01
PSMB3-210ENST00000618159 MED14O60244 1454 aa15.12■□□□□ 0.01
PSMB3-210ENST00000618159 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.11■□□□□ 0.01
PSMB3-210ENST00000618159 FBXO31Q5XUX0 539 aaPredicted RBP15.11■□□□□ 0.01
PSMB3-210ENST00000618159 PZPP20742 1482 aa15.1■□□□□ 0.01
PSMB3-210ENST00000618159 ANKLE2Q86XL3 938 aa15.1■□□□□ 0.01
PSMB3-210ENST00000618159 SENP3Q9H4L4 574 aaPredicted RBP15.1■□□□□ 0.01
PSMB3-210ENST00000618159 NPHP4O75161 1426 aaPredicted RBP15.09■□□□□ 0.01
PSMB3-210ENST00000618159 FYCO1Q9BQS8 1478 aa15.09■□□□□ 0.01
PSMB3-210ENST00000618159 LRRC7Q96NW7 1537 aa15.09■□□□□ 0.01
PSMB3-210ENST00000618159 SYNMO15061 1565 aa15.09■□□□□ 0.01
PSMB3-210ENST00000618159 UGGT1Q9NYU2 1555 aa15.08■□□□□ 0
PSMB3-210ENST00000618159 XIRP1Q702N8 1843 aaKnown RBP15.08■□□□□ 0
PSMB3-210ENST00000618159 KDM5DQ9BY66 1539 aa15.07■□□□□ 0
PSMB3-210ENST00000618159 CFDP1Q9UEE9 299 aaPredicted RBP15.07■□□□□ 0
PSMB3-210ENST00000618159 NLRP1Q9C000 1473 aa15.06■□□□□ 0
PSMB3-210ENST00000618159 FAM135AQ9P2D6 1515 aa15.06■□□□□ 0
PSMB3-210ENST00000618159 ZC3H13Q5T200 1668 aaKnown RBP15.06■□□□□ 0
PSMB3-210ENST00000618159 THEMISQ8N1K5 641 aaPredicted RBP15.05■□□□□ -0
PSMB3-210ENST00000618159 DHX29Q7Z478 1369 aaKnown RBP15.05■□□□□ -0
PSMB3-210ENST00000618159 MBD5Q9P267 1494 aa15.05■□□□□ -0
PSMB3-210ENST00000618159 RTEL1-TNFRSF6BF6WH68 1400 aa15.04■□□□□ -0
PSMB3-210ENST00000618159 MIA2Q96PC5 1412 aa15.04■□□□□ -0
PSMB3-210ENST00000618159 CCNB3Q8WWL7 1395 aa15.03■□□□□ -0
PSMB3-210ENST00000618159 ZNF644Q9H582 1327 aaPredicted RBP15.03■□□□□ -0
PSMB3-210ENST00000618159 TIAM1Q13009 1591 aa15.02■□□□□ -0
PSMB3-210ENST00000618159 CFAP65Q6ZU64 1925 aaKnown RBP15.02□□□□□ -0.01
PSMB3-210ENST00000618159 SETD1AO15047 1707 aaKnown RBP15.01□□□□□ -0.01
PSMB3-210ENST00000618159 KIF3BO15066 747 aa15.01□□□□□ -0.01
PSMB3-210ENST00000618159 POTEAQ6S8J7 498 aa15□□□□□ -0.01
PSMB3-210ENST00000618159 WASHC2CQ9Y4E1 1318 aa14.98□□□□□ -0.01
PSMB3-210ENST00000618159 UBR1Q8IWV7 1749 aa14.97□□□□□ -0.01
PSMB3-210ENST00000618159 MTUS2Q5JR59 1369 aa14.95□□□□□ -0.02
PSMB3-210ENST00000618159 CCDC141Q6ZP82 1450 aa14.94□□□□□ -0.02
PSMB3-210ENST00000618159 SCAF11Q99590 1463 aaKnown RBP14.93□□□□□ -0.02
PSMB3-210ENST00000618159 FAM135BQ49AJ0 1406 aa14.92□□□□□ -0.02
PSMB3-210ENST00000618159 ABCC3O15438 1527 aa14.92□□□□□ -0.02
PSMB3-210ENST00000618159 ERVK-7P63135 1459 aa14.92□□□□□ -0.02
PSMB3-210ENST00000618159 ROBO1Q9Y6N7 1651 aa14.92□□□□□ -0.02
PSMB3-210ENST00000618159 CEP152O94986 1710 aa14.91□□□□□ -0.02
PSMB3-210ENST00000618159 EHBP1L1Q8N3D4 1523 aa14.91□□□□□ -0.02
PSMB3-210ENST00000618159 NCOA2Q15596 1464 aa14.9□□□□□ -0.02
PSMB3-210ENST00000618159 CAMSAP2Q08AD1 1489 aa14.89□□□□□ -0.03
PSMB3-210ENST00000618159 ARHGAP23Q9P227 1491 aa14.89□□□□□ -0.03
PSMB3-210ENST00000618159 SLIT1O75093 1534 aa14.88□□□□□ -0.03
PSMB3-210ENST00000618159 LTKP29376 864 aa14.88□□□□□ -0.03
PSMB3-210ENST00000618159 CEP162Q5TB80 1403 aa14.88□□□□□ -0.03
PSMB3-210ENST00000618159 MROH1Q8NDA8 1641 aa14.88□□□□□ -0.03
PSMB3-210ENST00000618159 ARHGEF5Q12774 1597 aa14.87□□□□□ -0.03
PSMB3-210ENST00000618159 MAP3K1Q13233 1512 aa14.86□□□□□ -0.03
PSMB3-210ENST00000618159 EIF2AK4Q9P2K8 1649 aaKnown RBP14.85□□□□□ -0.03
PSMB3-210ENST00000618159 PHLPP1O60346 1717 aa14.84□□□□□ -0.03
PSMB3-210ENST00000618159 RSPH4AQ5TD94 716 aa14.84□□□□□ -0.03
PSMB3-210ENST00000618159 TXNDC2Q86VQ3 553 aa14.84□□□□□ -0.03
PSMB3-210ENST00000618159 TMEM94Q12767 1356 aa14.83□□□□□ -0.04
PSMB3-210ENST00000618159 PIK3C2BO00750 1634 aa14.82□□□□□ -0.04
PSMB3-210ENST00000618159 MAST1Q9Y2H9 1570 aa14.81□□□□□ -0.04
PSMB3-210ENST00000618159 UPF1Q92900 1129 aaKnown RBP eCLIP14.8□□□□□ -0.04
PSMB3-210ENST00000618159 LRRC9Q6ZRR7 1453 aa14.8□□□□□ -0.04
PSMB3-210ENST00000618159 TSPY4P0CV99 314 aa14.78□□□□□ -0.04
PSMB3-210ENST00000618159 TSPY10P0CW01 314 aa14.78□□□□□ -0.04
PSMB3-210ENST00000618159 TET3O43151 1660 aa14.77□□□□□ -0.04
PSMB3-210ENST00000618159 KDM5AP29375 1690 aaKnown RBP14.77□□□□□ -0.04
PSMB3-210ENST00000618159 COL16A1Q07092 1604 aaPredicted RBP14.77□□□□□ -0.04
PSMB3-210ENST00000618159 NWD1Q149M9 1564 aa14.77□□□□□ -0.04
PSMB3-210ENST00000618159 RBM33Q96EV2 1170 aaKnown RBP14.77□□□□□ -0.05
PSMB3-210ENST00000618159 EID1Q9Y6B2 187 aa14.77□□□□□ -0.05
PSMB3-210ENST00000618159 PRDM15P57071 1507 aaPredicted RBP14.76□□□□□ -0.05
PSMB3-210ENST00000618159 JCADQ9P266 1359 aa14.76□□□□□ -0.05
PSMB3-210ENST00000618159 TMEM2Q9UHN6 1383 aa14.76□□□□□ -0.05
PSMB3-210ENST00000618159 KCNA6P17658 529 aa14.76□□□□□ -0.05
PSMB3-210ENST00000618159 ARHGAP31Q2M1Z3 1444 aa14.75□□□□□ -0.05
PSMB3-210ENST00000618159 LRP6O75581 1613 aa14.75□□□□□ -0.05
PSMB3-210ENST00000618159 PROSER2Q86WR7 435 aaPredicted RBP14.75□□□□□ -0.05
PSMB3-210ENST00000618159 SRCAPQ6ZRS2 3230 aa14.74□□□□□ -0.05
PSMB3-210ENST00000618159 NKTRP30414 1462 aaKnown RBP14.74□□□□□ -0.05
PSMB3-210ENST00000618159 CHD2O14647 1828 aaKnown RBP14.73□□□□□ -0.05
PSMB3-210ENST00000618159 EFCAB6Q5THR3 1501 aa14.72□□□□□ -0.05
PSMB3-210ENST00000618159 TRIM52Q96A61 297 aa14.72□□□□□ -0.05
PSMB3-210ENST00000618159 DUOX2Q9NRD8 1548 aa14.71□□□□□ -0.05
PSMB3-210ENST00000618159 SHPRHQ149N8 1683 aa14.71□□□□□ -0.05
PSMB3-210ENST00000618159 SLC26A8Q96RN1 970 aa14.71□□□□□ -0.05
PSMB3-210ENST00000618159 SLAIN2Q9P270 581 aa14.71□□□□□ -0.05
PSMB3-210ENST00000618159 MSH6P52701 1360 aa14.71□□□□□ -0.06
PSMB3-210ENST00000618159 MYO5BQ9ULV0 1848 aa14.69□□□□□ -0.06
PSMB3-210ENST00000618159 FGD6Q6ZV73 1430 aa14.68□□□□□ -0.06
PSMB3-210ENST00000618159 ZNF772Q68DY9 489 aaPredicted RBP14.68□□□□□ -0.06
PSMB3-210ENST00000618159 STAG3Q9UJ98 1225 aa14.68□□□□□ -0.06
PSMB3-210ENST00000618159 SPATA31A6Q5VVP1 1343 aa14.67□□□□□ -0.06
PSMB3-210ENST00000618159 AHDC1Q5TGY3 1603 aaPredicted RBP14.66□□□□□ -0.06
PSMB3-210ENST00000618159 CDK12Q9NYV4 1490 aaPredicted RBP14.66□□□□□ -0.06
PSMB3-210ENST00000618159 IDI1Q13907 227 aa14.66□□□□□ -0.06
PSMB3-210ENST00000618159 ADGRB3O60242 1522 aa14.66□□□□□ -0.06
PSMB3-210ENST00000618159 CROCC2H7BZ55 1655 aa14.65□□□□□ -0.06
PSMB3-210ENST00000618159 MEX3CQ5U5Q3 659 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms