RNA–Protein interactions for RNA: ENST00000618072.4

CDK2AP1-207, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 3 BASIC

Gene CDK2AP1, Length 1,144 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-207ENST00000618072 SENP3Q9H4L4 574 aaPredicted RBP28.24■■■□□ 2.11
CDK2AP1-207ENST00000618072 ZNF644Q9H582 1327 aaPredicted RBP28.23■■■□□ 2.11
CDK2AP1-207ENST00000618072 RNF17Q9BXT8 1623 aaKnown RBP28.22■■■□□ 2.11
CDK2AP1-207ENST00000618072 RGS17Q9UGC6 210 aaPredicted RBP28.22■■■□□ 2.11
CDK2AP1-207ENST00000618072 MTUS2Q5JR59 1369 aa28.22■■■□□ 2.11
CDK2AP1-207ENST00000618072 ADGBQ8N7X0 1667 aa28.21■■■□□ 2.11
CDK2AP1-207ENST00000618072 KIAA1107Q9UPP5 1409 aa28.18■■■□□ 2.1
CDK2AP1-207ENST00000618072 SYNMO15061 1565 aa28.17■■■□□ 2.1
CDK2AP1-207ENST00000618072 PLEKHH2Q8IVE3 1493 aa28.16■■■□□ 2.1
CDK2AP1-207ENST00000618072 TNRQ92752 1358 aa28.16■■■□□ 2.1
CDK2AP1-207ENST00000618072 DEPDC5O75140 1603 aa28.16■■■□□ 2.1
CDK2AP1-207ENST00000618072 STRCP1A6NGW2 1772 aa28.16■■■□□ 2.1
CDK2AP1-207ENST00000618072 IQGAP1P46940 1657 aa28.15■■■□□ 2.1
CDK2AP1-207ENST00000618072 ANKLE2Q86XL3 938 aa28.14■■■□□ 2.1
CDK2AP1-207ENST00000618072 MED14O60244 1454 aa28.14■■■□□ 2.09
CDK2AP1-207ENST00000618072 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.13■■■□□ 2.09
CDK2AP1-207ENST00000618072 NPHP4O75161 1426 aaPredicted RBP28.13■■■□□ 2.09
CDK2AP1-207ENST00000618072 LRRC7Q96NW7 1537 aa28.12■■■□□ 2.09
CDK2AP1-207ENST00000618072 PZPP20742 1482 aa28.08■■■□□ 2.09
CDK2AP1-207ENST00000618072 UGGT1Q9NYU2 1555 aa28.07■■■□□ 2.08
CDK2AP1-207ENST00000618072 FBXO31Q5XUX0 539 aaPredicted RBP28.06■■■□□ 2.08
CDK2AP1-207ENST00000618072 THEMISQ8N1K5 641 aaPredicted RBP28.05■■■□□ 2.08
CDK2AP1-207ENST00000618072 FAM135AQ9P2D6 1515 aa28.04■■■□□ 2.08
CDK2AP1-207ENST00000618072 SETD1AO15047 1707 aaKnown RBP28.04■■■□□ 2.08
CDK2AP1-207ENST00000618072 KDM5DQ9BY66 1539 aa28.03■■■□□ 2.08
CDK2AP1-207ENST00000618072 NLRP1Q9C000 1473 aa28.03■■■□□ 2.08
CDK2AP1-207ENST00000618072 KIF3BO15066 747 aa28.03■■■□□ 2.08
CDK2AP1-207ENST00000618072 MBD5Q9P267 1494 aa28.02■■■□□ 2.08
CDK2AP1-207ENST00000618072 POTEAQ6S8J7 498 aa28.02■■■□□ 2.08
CDK2AP1-207ENST00000618072 TIAM1Q13009 1591 aa28.01■■■□□ 2.07
CDK2AP1-207ENST00000618072 DHX29Q7Z478 1369 aaKnown RBP27.99■■■□□ 2.07
CDK2AP1-207ENST00000618072 MIA2Q96PC5 1412 aa27.96■■■□□ 2.07
CDK2AP1-207ENST00000618072 ZC3H13Q5T200 1668 aaKnown RBP27.95■■■□□ 2.07
CDK2AP1-207ENST00000618072 EHBP1L1Q8N3D4 1523 aa27.95■■■□□ 2.06
CDK2AP1-207ENST00000618072 XIRP1Q702N8 1843 aaKnown RBP27.95■■■□□ 2.06
CDK2AP1-207ENST00000618072 RTEL1-TNFRSF6BF6WH68 1400 aa27.94■■■□□ 2.06
CDK2AP1-207ENST00000618072 CEP162Q5TB80 1403 aa27.94■■■□□ 2.06
CDK2AP1-207ENST00000618072 WASHC2CQ9Y4E1 1318 aa27.93■■■□□ 2.06
CDK2AP1-207ENST00000618072 NCOA2Q15596 1464 aa27.88■■■□□ 2.05
CDK2AP1-207ENST00000618072 CCDC141Q6ZP82 1450 aa27.87■■■□□ 2.05
CDK2AP1-207ENST00000618072 CAMSAP2Q08AD1 1489 aa27.86■■■□□ 2.05
CDK2AP1-207ENST00000618072 TSPY4P0CV99 314 aa27.85■■■□□ 2.05
CDK2AP1-207ENST00000618072 TSPY10P0CW01 314 aa27.85■■■□□ 2.05
CDK2AP1-207ENST00000618072 RSPH4AQ5TD94 716 aa27.85■■■□□ 2.05
CDK2AP1-207ENST00000618072 FAM135BQ49AJ0 1406 aa27.84■■■□□ 2.05
CDK2AP1-207ENST00000618072 ROBO1Q9Y6N7 1651 aa27.8■■■□□ 2.04
CDK2AP1-207ENST00000618072 UBR1Q8IWV7 1749 aa27.78■■■□□ 2.04
CDK2AP1-207ENST00000618072 SCAF11Q99590 1463 aaKnown RBP27.77■■■□□ 2.04
CDK2AP1-207ENST00000618072 LOC105371045A0A1W2PR82 267 aa27.75■■■□□ 2.03
CDK2AP1-207ENST00000618072 ERVK-7P63135 1459 aa27.71■■■□□ 2.03
CDK2AP1-207ENST00000618072 KANK4Q5T7N3 995 aaPredicted RBP27.7■■■□□ 2.02
CDK2AP1-207ENST00000618072 ABCC3O15438 1527 aa27.69■■■□□ 2.02
CDK2AP1-207ENST00000618072 UPF1Q92900 1129 aaKnown RBP eCLIP27.68■■■□□ 2.02
CDK2AP1-207ENST00000618072 CFAP65Q6ZU64 1925 aaKnown RBP27.68■■■□□ 2.02
CDK2AP1-207ENST00000618072 ARHGEF5Q12774 1597 aa27.66■■■□□ 2.02
CDK2AP1-207ENST00000618072 ARHGAP23Q9P227 1491 aa27.66■■■□□ 2.02
CDK2AP1-207ENST00000618072 SLIT1O75093 1534 aa27.66■■■□□ 2.02
CDK2AP1-207ENST00000618072 LRRC9Q6ZRR7 1453 aa27.65■■■□□ 2.02
CDK2AP1-207ENST00000618072 PHLPP1O60346 1717 aa27.65■■■□□ 2.02
CDK2AP1-207ENST00000618072 SRCAPQ6ZRS2 3230 aa27.64■■■□□ 2.02
CDK2AP1-207ENST00000618072 TMEM94Q12767 1356 aa27.63■■■□□ 2.01
CDK2AP1-207ENST00000618072 MAP3K1Q13233 1512 aa27.62■■■□□ 2.01
CDK2AP1-207ENST00000618072 LTKP29376 864 aa27.62■■■□□ 2.01
CDK2AP1-207ENST00000618072 TXNDC2Q86VQ3 553 aa27.61■■■□□ 2.01
CDK2AP1-207ENST00000618072 VPS8Q8N3P4 1428 aa27.6■■■□□ 2.01
CDK2AP1-207ENST00000618072 CEP152O94986 1710 aa27.6■■■□□ 2.01
CDK2AP1-207ENST00000618072 JCADQ9P266 1359 aa27.6■■■□□ 2.01
CDK2AP1-207ENST00000618072 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.56■■■□□ 2
CDK2AP1-207ENST00000618072 RRP7BPQ9NSQ0 103 aa27.55■■■□□ 2
CDK2AP1-207ENST00000618072 EID1Q9Y6B2 187 aa27.55■■■□□ 2
CDK2AP1-207ENST00000618072 EIF2AK4Q9P2K8 1649 aaKnown RBP27.55■■■□□ 2
CDK2AP1-207ENST00000618072 TRIM52Q96A61 297 aa27.54■■■□□ 2
CDK2AP1-207ENST00000618072 MROH1Q8NDA8 1641 aa27.52■■■□□ 2
CDK2AP1-207ENST00000618072 COL16A1Q07092 1604 aaPredicted RBP27.52■■■□□ 2
CDK2AP1-207ENST00000618072 MYOM3Q5VTT5 1437 aa27.51■■□□□ 1.99
CDK2AP1-207ENST00000618072 LRP6O75581 1613 aa27.51■■□□□ 1.99
CDK2AP1-207ENST00000618072 MAST1Q9Y2H9 1570 aa27.51■■□□□ 1.99
CDK2AP1-207ENST00000618072 PRDM15P57071 1507 aaPredicted RBP27.5■■□□□ 1.99
CDK2AP1-207ENST00000618072 ZNF772Q68DY9 489 aaPredicted RBP27.49■■□□□ 1.99
CDK2AP1-207ENST00000618072 PIK3C2BO00750 1634 aa27.49■■□□□ 1.99
CDK2AP1-207ENST00000618072 KCNA6P17658 529 aa27.48■■□□□ 1.99
CDK2AP1-207ENST00000618072 PROSER2Q86WR7 435 aaPredicted RBP27.48■■□□□ 1.99
CDK2AP1-207ENST00000618072 NKTRP30414 1462 aaKnown RBP27.48■■□□□ 1.99
CDK2AP1-207ENST00000618072 RBM33Q96EV2 1170 aaKnown RBP27.47■■□□□ 1.99
CDK2AP1-207ENST00000618072 KIF15Q9NS87 1388 aa27.47■■□□□ 1.99
CDK2AP1-207ENST00000618072 NWD1Q149M9 1564 aa27.46■■□□□ 1.99
CDK2AP1-207ENST00000618072 MSH6P52701 1360 aa27.46■■□□□ 1.99
CDK2AP1-207ENST00000618072 MEX3CQ5U5Q3 659 aaKnown RBP27.45■■□□□ 1.98
CDK2AP1-207ENST00000618072 TMEM2Q9UHN6 1383 aa27.45■■□□□ 1.98
CDK2AP1-207ENST00000618072 STAG3Q9UJ98 1225 aa27.44■■□□□ 1.98
CDK2AP1-207ENST00000618072 CHIC2Q9UKJ5 165 aa27.44■■□□□ 1.98
CDK2AP1-207ENST00000618072 DUOX2Q9NRD8 1548 aa27.44■■□□□ 1.98
CDK2AP1-207ENST00000618072 SPATA31A6Q5VVP1 1343 aa27.43■■□□□ 1.98
CDK2AP1-207ENST00000618072 KDM5AP29375 1690 aaKnown RBP27.43■■□□□ 1.98
CDK2AP1-207ENST00000618072 APLP2Q06481 763 aa27.42■■□□□ 1.98
CDK2AP1-207ENST00000618072 SLAIN2Q9P270 581 aa27.42■■□□□ 1.98
CDK2AP1-207ENST00000618072 FGD6Q6ZV73 1430 aa27.41■■□□□ 1.98
CDK2AP1-207ENST00000618072 TET3O43151 1660 aa27.41■■□□□ 1.98
CDK2AP1-207ENST00000618072 CDK12Q9NYV4 1490 aaPredicted RBP27.41■■□□□ 1.98
CDK2AP1-207ENST00000618072 ABCC5O15440 1437 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms