RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 YEATS2Q9ULM3 1422 aa12.01□□□□□ -0.49
TARDBP-219ENST00000617757 ARHGEF40Q8TER5 1519 aa12.01□□□□□ -0.49
TARDBP-219ENST00000617757 DHX29Q7Z478 1369 aaKnown RBP12□□□□□ -0.49
TARDBP-219ENST00000617757 A2MP01023 1474 aa12□□□□□ -0.49
TARDBP-219ENST00000617757 REREQ9P2R6 1566 aa12□□□□□ -0.49
TARDBP-219ENST00000617757 DEPDC5O75140 1603 aa12□□□□□ -0.49
TARDBP-219ENST00000617757 SIGLEC1Q9BZZ2 1709 aa11.98□□□□□ -0.49
TARDBP-219ENST00000617757 ACIN1Q9UKV3 1341 aaKnown RBP11.98□□□□□ -0.49
TARDBP-219ENST00000617757 RNF17Q9BXT8 1623 aaKnown RBP11.97□□□□□ -0.49
TARDBP-219ENST00000617757 ATP10AO60312 1499 aa11.97□□□□□ -0.49
TARDBP-219ENST00000617757 KDM5DQ9BY66 1539 aa11.96□□□□□ -0.49
TARDBP-219ENST00000617757 IQGAP3Q86VI3 1631 aa11.96□□□□□ -0.5
TARDBP-219ENST00000617757 MROH1Q8NDA8 1641 aa11.96□□□□□ -0.5
TARDBP-219ENST00000617757 DHX57Q6P158 1386 aaKnown RBP11.95□□□□□ -0.5
TARDBP-219ENST00000617757 TRIM52Q96A61 297 aa11.94□□□□□ -0.5
TARDBP-219ENST00000617757 CEP152O94986 1710 aa11.94□□□□□ -0.5
TARDBP-219ENST00000617757 AGLP35573 1532 aa11.93□□□□□ -0.5
TARDBP-219ENST00000617757 PRDM15P57071 1507 aaPredicted RBP11.93□□□□□ -0.5
TARDBP-219ENST00000617757 PZPP20742 1482 aa11.93□□□□□ -0.5
TARDBP-219ENST00000617757 VWDEQ8N2E2 1590 aa11.92□□□□□ -0.5
TARDBP-219ENST00000617757 KIF3BO15066 747 aa11.92□□□□□ -0.5
TARDBP-219ENST00000617757 NUP155O75694 1391 aa11.92□□□□□ -0.5
TARDBP-219ENST00000617757 FAM135AQ9P2D6 1515 aa11.91□□□□□ -0.5
TARDBP-219ENST00000617757 CCER1Q8TC90 406 aaPredicted RBP11.91□□□□□ -0.5
TARDBP-219ENST00000617757 TET3O43151 1660 aa11.91□□□□□ -0.5
TARDBP-219ENST00000617757 ZC3H13Q5T200 1668 aaKnown RBP11.91□□□□□ -0.5
TARDBP-219ENST00000617757 MPHOSPH9Q99550 1183 aa11.9□□□□□ -0.5
TARDBP-219ENST00000617757 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.89□□□□□ -0.51
TARDBP-219ENST00000617757 E9PCH4 1651 aa11.89□□□□□ -0.51
TARDBP-219ENST00000617757 SLC4A1APQ9BWU0 796 aaKnown RBP11.88□□□□□ -0.51
TARDBP-219ENST00000617757 CAMSAP1Q5T5Y3 1602 aa11.87□□□□□ -0.51
TARDBP-219ENST00000617757 GGT6Q6P531 493 aa11.87□□□□□ -0.51
TARDBP-219ENST00000617757 KANK1Q14678 1352 aa11.87□□□□□ -0.51
TARDBP-219ENST00000617757 CLTCQ00610 1675 aaKnown RBP11.87□□□□□ -0.51
TARDBP-219ENST00000617757 LMTK2Q8IWU2 1503 aa11.86□□□□□ -0.51
TARDBP-219ENST00000617757 CFAP65Q6ZU64 1925 aaKnown RBP11.86□□□□□ -0.51
TARDBP-219ENST00000617757 ABCC3O15438 1527 aa11.86□□□□□ -0.51
TARDBP-219ENST00000617757 SPHKAPQ2M3C7 1700 aa11.85□□□□□ -0.51
TARDBP-219ENST00000617757 EFCAB6Q5THR3 1501 aa11.85□□□□□ -0.51
TARDBP-219ENST00000617757 CLSPNQ9HAW4 1339 aa11.85□□□□□ -0.51
TARDBP-219ENST00000617757 PKD2Q13563 968 aa11.84□□□□□ -0.51
TARDBP-219ENST00000617757 FER1L4A9Z1Z3 1794 aa11.83□□□□□ -0.52
TARDBP-219ENST00000617757 ARID4BQ4LE39 1312 aaPredicted RBP11.82□□□□□ -0.52
TARDBP-219ENST00000617757 WASHC2CQ9Y4E1 1318 aa11.82□□□□□ -0.52
TARDBP-219ENST00000617757 MROH2AA6NES4 1674 aa11.81□□□□□ -0.52
TARDBP-219ENST00000617757 ANKRD30BQ9BXX2 1392 aa11.81□□□□□ -0.52
TARDBP-219ENST00000617757 MLECQ14165 292 aa11.81□□□□□ -0.52
TARDBP-219ENST00000617757 PREX1Q8TCU6 1659 aa11.8□□□□□ -0.52
TARDBP-219ENST00000617757 RPRD2Q5VT52 1461 aaKnown RBP11.79□□□□□ -0.52
TARDBP-219ENST00000617757 ARHGAP31Q2M1Z3 1444 aa11.78□□□□□ -0.52
TARDBP-219ENST00000617757 ADAMTSL3P82987 1691 aa11.78□□□□□ -0.52
TARDBP-219ENST00000617757 SIN3AQ96ST3 1273 aa11.78□□□□□ -0.52
TARDBP-219ENST00000617757 PLA2R1Q13018 1463 aa11.77□□□□□ -0.52
TARDBP-219ENST00000617757 KIF1BO60333 1816 aa11.77□□□□□ -0.52
TARDBP-219ENST00000617757 TRPM2O94759 1503 aa11.77□□□□□ -0.52
TARDBP-219ENST00000617757 MADDQ8WXG6 1647 aa11.77□□□□□ -0.53
TARDBP-219ENST00000617757 C3P01024 1663 aa11.77□□□□□ -0.53
TARDBP-219ENST00000617757 PTPRTO14522 1441 aa11.77□□□□□ -0.53
TARDBP-219ENST00000617757 NPATQ14207 1427 aa11.77□□□□□ -0.53
TARDBP-219ENST00000617757 CLTCL1P53675 1640 aa11.76□□□□□ -0.53
TARDBP-219ENST00000617757 RIMS1Q86UR5 1692 aaKnown RBP11.76□□□□□ -0.53
TARDBP-219ENST00000617757 ZEB1P37275 1124 aaPredicted RBP11.75□□□□□ -0.53
TARDBP-219ENST00000617757 ESF1Q9H501 851 aaKnown RBP11.75□□□□□ -0.53
TARDBP-219ENST00000617757 CNTLNQ9NXG0 1405 aa11.75□□□□□ -0.53
TARDBP-219ENST00000617757 SYNMO15061 1565 aa11.75□□□□□ -0.53
TARDBP-219ENST00000617757 NEUROD1Q13562 356 aa11.74□□□□□ -0.53
TARDBP-219ENST00000617757 PIK3C2BO00750 1634 aa11.74□□□□□ -0.53
TARDBP-219ENST00000617757 NOS1P29475 1434 aa11.73□□□□□ -0.53
TARDBP-219ENST00000617757 SPATA31D1Q6ZQQ2 1576 aa11.73□□□□□ -0.53
TARDBP-219ENST00000617757 UGGT1Q9NYU2 1555 aa11.72□□□□□ -0.53
TARDBP-219ENST00000617757 CCDC144AA2RUR9 1427 aa11.72□□□□□ -0.53
TARDBP-219ENST00000617757 ZMYM3Q14202 1370 aa11.72□□□□□ -0.53
TARDBP-219ENST00000617757 MYO5BQ9ULV0 1848 aa11.72□□□□□ -0.53
TARDBP-219ENST00000617757 ERVK-7P63135 1459 aa11.71□□□□□ -0.53
TARDBP-219ENST00000617757 FBXO31Q5XUX0 539 aaPredicted RBP11.69□□□□□ -0.54
TARDBP-219ENST00000617757 TIMELESSQ9UNS1 1208 aa11.69□□□□□ -0.54
TARDBP-219ENST00000617757 NEURL4Q96JN8 1562 aa11.69□□□□□ -0.54
TARDBP-219ENST00000617757 IFT172Q9UG01 1749 aa11.69□□□□□ -0.54
TARDBP-219ENST00000617757 TONSLQ96HA7 1378 aa11.68□□□□□ -0.54
TARDBP-219ENST00000617757 CEBPAP49715 358 aaPredicted RBP11.66□□□□□ -0.54
TARDBP-219ENST00000617757 TMEM131LA2VDJ0 1609 aa11.66□□□□□ -0.54
TARDBP-219ENST00000617757 SPATA31E1Q6ZUB1 1445 aa11.66□□□□□ -0.54
TARDBP-219ENST00000617757 PPLO60437 1756 aa11.66□□□□□ -0.54
TARDBP-219ENST00000617757 ADGRB3O60242 1522 aa11.65□□□□□ -0.54
TARDBP-219ENST00000617757 KDM5AP29375 1690 aaKnown RBP11.65□□□□□ -0.54
TARDBP-219ENST00000617757 SLC52A1Q9NWF4 448 aa11.65□□□□□ -0.54
TARDBP-219ENST00000617757 UBR1Q8IWV7 1749 aa11.64□□□□□ -0.55
TARDBP-219ENST00000617757 IDI1Q13907 227 aa11.64□□□□□ -0.55
TARDBP-219ENST00000617757 L3MBTL2Q969R5 705 aa11.64□□□□□ -0.55
TARDBP-219ENST00000617757 MYO3AQ8NEV4 1616 aa11.64□□□□□ -0.55
TARDBP-219ENST00000617757 SETD1BQ9UPS6 1966 aaKnown RBP11.63□□□□□ -0.55
TARDBP-219ENST00000617757 PPP1R15AO75807 674 aaPredicted RBP11.63□□□□□ -0.55
TARDBP-219ENST00000617757 TNRQ92752 1358 aa11.63□□□□□ -0.55
TARDBP-219ENST00000617757 PTPRMP28827 1452 aa11.63□□□□□ -0.55
TARDBP-219ENST00000617757 RGL3Q3MIN7 710 aa11.62□□□□□ -0.55
TARDBP-219ENST00000617757 ZNF142P52746 1687 aaPredicted RBP11.6□□□□□ -0.55
TARDBP-219ENST00000617757 NLRP1Q9C000 1473 aa11.6□□□□□ -0.55
TARDBP-219ENST00000617757 CHGAP10645 457 aaKnown RBP11.6□□□□□ -0.55
TARDBP-219ENST00000617757 NEXMIFQ5QGS0 1516 aa11.6□□□□□ -0.55
TARDBP-219ENST00000617757 DCAF11Q8TEB1 546 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms