RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.04■■■□□ 2.41e-11■■■■□ 21.4
SDHA-220ENST00000617470 SIGLEC1Q9BZZ2 1709 aa30.03■■■□□ 2.4
SDHA-220ENST00000617470 MLECQ14165 292 aa30.03■■■□□ 2.4
SDHA-220ENST00000617470 TRIM52Q96A61 297 aa30.03■■■□□ 2.4
SDHA-220ENST00000617470 EIF2AK4Q9P2K8 1649 aaKnown RBP30.02■■■□□ 2.4
SDHA-220ENST00000617470 AGLP35573 1532 aa29.99■■■□□ 2.39
SDHA-220ENST00000617470 NUP155O75694 1391 aa29.94■■■□□ 2.38
SDHA-220ENST00000617470 BCORL1Q5H9F3 1711 aa29.93■■■□□ 2.38
SDHA-220ENST00000617470 RNF17Q9BXT8 1623 aaKnown RBP29.91■■■□□ 2.38
SDHA-220ENST00000617470 KANK1Q14678 1352 aa29.91■■■□□ 2.38
SDHA-220ENST00000617470 UNC13BO14795 1591 aa29.9■■■□□ 2.38
SDHA-220ENST00000617470 DEPDC5O75140 1603 aa29.89■■■□□ 2.38
SDHA-220ENST00000617470 MROH1Q8NDA8 1641 aa29.87■■■□□ 2.37
SDHA-220ENST00000617470 ACIN1Q9UKV3 1341 aaKnown RBP29.87■■■□□ 2.37
SDHA-220ENST00000617470 WASHC2CQ9Y4E1 1318 aa29.86■■■□□ 2.37
SDHA-220ENST00000617470 PRDM15P57071 1507 aaPredicted RBP29.86■■■□□ 2.37
SDHA-220ENST00000617470 ESF1Q9H501 851 aaKnown RBP29.85■■■□□ 2.37
SDHA-220ENST00000617470 SLC4A1APQ9BWU0 796 aaKnown RBP29.83■■■□□ 2.37
SDHA-220ENST00000617470 FAM135AQ9P2D6 1515 aa29.8■■■□□ 2.36
SDHA-220ENST00000617470 PPP6R1Q9UPN7 881 aa29.79■■■□□ 2.36
SDHA-220ENST00000617470 KDM5DQ9BY66 1539 aa29.79■■■□□ 2.36
SDHA-220ENST00000617470 MPHOSPH9Q99550 1183 aa29.79■■■□□ 2.36
SDHA-220ENST00000617470 IQGAP3Q86VI3 1631 aa29.78■■■□□ 2.36
SDHA-220ENST00000617470 PZPP20742 1482 aa29.78■■■□□ 2.36
SDHA-220ENST00000617470 VWDEQ8N2E2 1590 aa29.77■■■□□ 2.36
SDHA-220ENST00000617470 CEP152O94986 1710 aa29.77■■■□□ 2.36
SDHA-220ENST00000617470 ABCC3O15438 1527 aa29.76■■■□□ 2.35
SDHA-220ENST00000617470 SIN3AQ96ST3 1273 aa29.73■■■□□ 2.35
SDHA-220ENST00000617470 PKD2Q13563 968 aa29.73■■■□□ 2.35
SDHA-220ENST00000617470 CLTCQ00610 1675 aaKnown RBP29.73■■■□□ 2.35
SDHA-220ENST00000617470 ZC3H13Q5T200 1668 aaKnown RBP29.71■■■□□ 2.35
SDHA-220ENST00000617470 FER1L4A9Z1Z3 1794 aa29.7■■■□□ 2.35
SDHA-220ENST00000617470 LMTK2Q8IWU2 1503 aa29.7■■■□□ 2.34
SDHA-220ENST00000617470 FOXD1Q16676 465 aa29.7■■■□□ 2.34
SDHA-220ENST00000617470 ZNF316A6NFI3 1004 aaPredicted RBP29.69■■■□□ 2.34
SDHA-220ENST00000617470 TET3O43151 1660 aa29.68■■■□□ 2.34
SDHA-220ENST00000617470 MADDQ8WXG6 1647 aa29.68■■■□□ 2.34
SDHA-220ENST00000617470 CNTLNQ9NXG0 1405 aa29.67■■■□□ 2.34
SDHA-220ENST00000617470 PLPPR3Q6T4P5 718 aa29.67■■■□□ 2.34
SDHA-220ENST00000617470 CAMSAP1Q5T5Y3 1602 aa29.67■■■□□ 2.34
SDHA-220ENST00000617470 ADAMTSL3P82987 1691 aa29.66■■■□□ 2.34
SDHA-220ENST00000617470 EFCAB6Q5THR3 1501 aa29.65■■■□□ 2.34
SDHA-220ENST00000617470 ZMYM3Q14202 1370 aa29.64■■■□□ 2.34
SDHA-220ENST00000617470 NEUROD1Q13562 356 aa29.63■■■□□ 2.33
SDHA-220ENST00000617470 RIMS1Q86UR5 1692 aaKnown RBP29.62■■■□□ 2.33
SDHA-220ENST00000617470 E9PCH4 1651 aa29.61■■■□□ 2.33
SDHA-220ENST00000617470 NPATQ14207 1427 aa29.61■■■□□ 2.33
SDHA-220ENST00000617470 CEBPAP49715 358 aaPredicted RBP29.59■■■□□ 2.33
SDHA-220ENST00000617470 ARHGAP31Q2M1Z3 1444 aa29.57■■■□□ 2.32
SDHA-220ENST00000617470 MROH2AA6NES4 1674 aa29.57■■■□□ 2.32
SDHA-220ENST00000617470 CFAP65Q6ZU64 1925 aaKnown RBP29.56■■■□□ 2.32
SDHA-220ENST00000617470 FBXO31Q5XUX0 539 aaPredicted RBP29.56■■■□□ 2.32
SDHA-220ENST00000617470 TIMELESSQ9UNS1 1208 aa29.55■■■□□ 2.32
SDHA-220ENST00000617470 RPRD2Q5VT52 1461 aaKnown RBP29.55■■■□□ 2.32
SDHA-220ENST00000617470 KDM4FA0A1W2PPD8 638 aa29.55■■■□□ 2.32
SDHA-220ENST00000617470 C3P01024 1663 aa29.51■■■□□ 2.32
SDHA-220ENST00000617470 DIEXFQ68CQ4 756 aaKnown RBP29.49■■■□□ 2.31
SDHA-220ENST00000617470 PTPRMP28827 1452 aa29.49■■■□□ 2.31
SDHA-220ENST00000617470 ERVK-7P63135 1459 aa29.48■■■□□ 2.31
SDHA-220ENST00000617470 ANKRD30BQ9BXX2 1392 aa29.47■■■□□ 2.31
SDHA-220ENST00000617470 PREX1Q8TCU6 1659 aa29.47■■■□□ 2.31
SDHA-220ENST00000617470 SPHKAPQ2M3C7 1700 aa29.46■■■□□ 2.31
SDHA-220ENST00000617470 PLA2R1Q13018 1463 aa29.45■■■□□ 2.3
SDHA-220ENST00000617470 PTPRTO14522 1441 aa29.44■■■□□ 2.3
SDHA-220ENST00000617470 NOS1P29475 1434 aa29.44■■■□□ 2.3
SDHA-220ENST00000617470 PPP1R15AO75807 674 aaPredicted RBP29.42■■■□□ 2.3
SDHA-220ENST00000617470 SPATA31D1Q6ZQQ2 1576 aa29.41■■■□□ 2.3
SDHA-220ENST00000617470 TNRQ92752 1358 aa29.41■■■□□ 2.3
SDHA-220ENST00000617470 CCDC144AA2RUR9 1427 aa29.41■■■□□ 2.3
SDHA-220ENST00000617470 TRPM2O94759 1503 aa29.41■■■□□ 2.3
SDHA-220ENST00000617470 TONSLQ96HA7 1378 aa29.39■■■□□ 2.3
SDHA-220ENST00000617470 SYNMO15061 1565 aa29.39■■■□□ 2.3
SDHA-220ENST00000617470 UGGT1Q9NYU2 1555 aa29.39■■■□□ 2.29
SDHA-220ENST00000617470 SLC52A1Q9NWF4 448 aa29.35■■■□□ 2.29
SDHA-220ENST00000617470 CHGAP10645 457 aaKnown RBP29.34■■■□□ 2.29
SDHA-220ENST00000617470 IDI1Q13907 227 aa29.34■■■□□ 2.29
SDHA-220ENST00000617470 CLTCL1P53675 1640 aa29.33■■■□□ 2.29
SDHA-220ENST00000617470 STAG3Q9UJ98 1225 aa29.3■■■□□ 2.28
SDHA-220ENST00000617470 PIK3C2BO00750 1634 aa29.27■■■□□ 2.28
SDHA-220ENST00000617470 RGL3Q3MIN7 710 aa29.25■■■□□ 2.27
SDHA-220ENST00000617470 NLRP1Q9C000 1473 aa29.25■■■□□ 2.27
SDHA-220ENST00000617470 MYO3AQ8NEV4 1616 aa29.24■■■□□ 2.27
SDHA-220ENST00000617470 ZNF326Q5BKZ1 582 aaKnown RBP29.22■■■□□ 2.27
SDHA-220ENST00000617470 KIF1BO60333 1816 aa29.22■■■□□ 2.27
SDHA-220ENST00000617470 SETD1BQ9UPS6 1966 aaKnown RBP29.21■■■□□ 2.27
SDHA-220ENST00000617470 UHRF1BP1Q6BDS2 1440 aa29.2■■■□□ 2.26
SDHA-220ENST00000617470 A2ML1A8K2U0 1454 aa29.17■■■□□ 2.26
SDHA-220ENST00000617470 ADGRB3O60242 1522 aa29.17■■■□□ 2.26
SDHA-220ENST00000617470 L3MBTL2Q969R5 705 aa29.16■■■□□ 2.26
SDHA-220ENST00000617470 SPATA31E1Q6ZUB1 1445 aa29.16■■■□□ 2.26
SDHA-220ENST00000617470 CEP170BQ9Y4F5 1589 aaPredicted RBP29.16■■■□□ 2.26
SDHA-220ENST00000617470 TMEM131LA2VDJ0 1609 aa29.16■■■□□ 2.26
SDHA-220ENST00000617470 MYO5BQ9ULV0 1848 aa29.12■■■□□ 2.25
SDHA-220ENST00000617470 UBR1Q8IWV7 1749 aa29.12■■■□□ 2.25
SDHA-220ENST00000617470 THEMISQ8N1K5 641 aaPredicted RBP29.11■■■□□ 2.25
SDHA-220ENST00000617470 DCAF11Q8TEB1 546 aa29.1■■■□□ 2.25
SDHA-220ENST00000617470 ZNF142P52746 1687 aaPredicted RBP29.09■■■□□ 2.25
SDHA-220ENST00000617470 KDM2AQ9Y2K7 1162 aa29.09■■■□□ 2.25
SDHA-220ENST00000617470 NUTM2DQ5VT03 806 aaPredicted RBP29.08■■■□□ 2.25
SDHA-220ENST00000617470 NEURL4Q96JN8 1562 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms