RNA–Protein interactions for RNA: ENST00000617003.1

AP3S2-216, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

BASIC

Gene AP3S2, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-216ENST00000617003 ERBINQ96RT1 1412 aa24.83■■□□□ 1.57
AP3S2-216ENST00000617003 CNTLNQ9NXG0 1405 aa24.83■■□□□ 1.57
AP3S2-216ENST00000617003 EIF2AK4Q9P2K8 1649 aaKnown RBP24.83■■□□□ 1.57
AP3S2-216ENST00000617003 CLTCQ00610 1675 aaKnown RBP24.82■■□□□ 1.56
AP3S2-216ENST00000617003 ROCK1Q13464 1354 aa24.82■■□□□ 1.56
AP3S2-216ENST00000617003 ZMYM3Q14202 1370 aa24.8■■□□□ 1.56
AP3S2-216ENST00000617003 WASHC2CQ9Y4E1 1318 aa24.79■■□□□ 1.56
AP3S2-216ENST00000617003 C3P01024 1663 aa24.79■■□□□ 1.56
AP3S2-216ENST00000617003 RNF17Q9BXT8 1623 aaKnown RBP24.78■■□□□ 1.56
AP3S2-216ENST00000617003 ANKRD50Q9ULJ7 1429 aa24.77■■□□□ 1.56
AP3S2-216ENST00000617003 MROH2AA6NES4 1674 aa24.77■■□□□ 1.56
AP3S2-216ENST00000617003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.76■■□□□ 1.55
AP3S2-216ENST00000617003 SETD1BQ9UPS6 1966 aaKnown RBP24.75■■□□□ 1.55
AP3S2-216ENST00000617003 MROH1Q8NDA8 1641 aa24.74■■□□□ 1.55
AP3S2-216ENST00000617003 KDM5DQ9BY66 1539 aa24.72■■□□□ 1.55
AP3S2-216ENST00000617003 FAM135AQ9P2D6 1515 aa24.7■■□□□ 1.54
AP3S2-216ENST00000617003 DEPDC5O75140 1603 aa24.69■■□□□ 1.54
AP3S2-216ENST00000617003 ABCC3O15438 1527 aa24.68■■□□□ 1.54
AP3S2-216ENST00000617003 CEP152O94986 1710 aa24.68■■□□□ 1.54
AP3S2-216ENST00000617003 PRDM15P57071 1507 aaPredicted RBP24.67■■□□□ 1.54
AP3S2-216ENST00000617003 KANK1Q14678 1352 aa24.67■■□□□ 1.54
AP3S2-216ENST00000617003 CFAP65Q6ZU64 1925 aaKnown RBP24.66■■□□□ 1.54
AP3S2-216ENST00000617003 FBXO31Q5XUX0 539 aaPredicted RBP24.66■■□□□ 1.54
AP3S2-216ENST00000617003 ZC3H13Q5T200 1668 aaKnown RBP24.65■■□□□ 1.54
AP3S2-216ENST00000617003 NAIPQ13075 1403 aa24.63■■□□□ 1.53
AP3S2-216ENST00000617003 NPATQ14207 1427 aa24.63■■□□□ 1.53
AP3S2-216ENST00000617003 PZPP20742 1482 aa24.61■■□□□ 1.53
AP3S2-216ENST00000617003 LMTK3Q96Q04 1460 aa24.61■■□□□ 1.53
AP3S2-216ENST00000617003 VWDEQ8N2E2 1590 aa24.61■■□□□ 1.53
AP3S2-216ENST00000617003 PREX1Q8TCU6 1659 aa24.61■■□□□ 1.53
AP3S2-216ENST00000617003 CAMSAP1Q5T5Y3 1602 aa24.59■■□□□ 1.53
AP3S2-216ENST00000617003 HFM1A2PYH4 1435 aa24.58■■□□□ 1.53
AP3S2-216ENST00000617003 HSPA2P54652 639 aa24.58■■□□□ 1.52
AP3S2-216ENST00000617003 UHRF1BP1Q6BDS2 1440 aa24.58■■□□□ 1.52
AP3S2-216ENST00000617003 UNC13BO14795 1591 aa24.57■■□□□ 1.52
AP3S2-216ENST00000617003 GCC2Q8IWJ2 1684 aa24.57■■□□□ 1.52
AP3S2-216ENST00000617003 LMTK2Q8IWU2 1503 aa24.56■■□□□ 1.52
AP3S2-216ENST00000617003 ARHGAP31Q2M1Z3 1444 aa24.55■■□□□ 1.52
AP3S2-216ENST00000617003 NUP155O75694 1391 aa24.55■■□□□ 1.52
AP3S2-216ENST00000617003 TNRQ92752 1358 aa24.54■■□□□ 1.52
AP3S2-216ENST00000617003 ERVK-7P63135 1459 aa24.5■■□□□ 1.51
AP3S2-216ENST00000617003 SPATA31D1Q6ZQQ2 1576 aa24.49■■□□□ 1.51
AP3S2-216ENST00000617003 IQGAP3Q86VI3 1631 aa24.49■■□□□ 1.51
AP3S2-216ENST00000617003 TRIM52Q96A61 297 aa24.48■■□□□ 1.51
AP3S2-216ENST00000617003 MYO3AQ8NEV4 1616 aa24.48■■□□□ 1.51
AP3S2-216ENST00000617003 TET3O43151 1660 aa24.48■■□□□ 1.51
AP3S2-216ENST00000617003 EFCAB6Q5THR3 1501 aa24.47■■□□□ 1.51
AP3S2-216ENST00000617003 SETD5Q9C0A6 1442 aa24.44■■□□□ 1.5
AP3S2-216ENST00000617003 CEP170BQ9Y4F5 1589 aaPredicted RBP24.43■■□□□ 1.5
AP3S2-216ENST00000617003 A2ML1A8K2U0 1454 aa24.43■■□□□ 1.5
AP3S2-216ENST00000617003 ZNF142P52746 1687 aaPredicted RBP24.42■■□□□ 1.5
AP3S2-216ENST00000617003 E9PCH4 1651 aa24.41■■□□□ 1.5
AP3S2-216ENST00000617003 RPRD2Q5VT52 1461 aaKnown RBP24.41■■□□□ 1.5
AP3S2-216ENST00000617003 NLRP1Q9C000 1473 aa24.41■■□□□ 1.5
AP3S2-216ENST00000617003 NOS1P29475 1434 aa24.4■■□□□ 1.5
AP3S2-216ENST00000617003 IDI1Q13907 227 aa24.37■■□□□ 1.49
AP3S2-216ENST00000617003 SYNMO15061 1565 aa24.36■■□□□ 1.49
AP3S2-216ENST00000617003 THEMISQ8N1K5 641 aaPredicted RBP24.36■■□□□ 1.49
AP3S2-216ENST00000617003 SLC4A1APQ9BWU0 796 aaKnown RBP24.36■■□□□ 1.49
AP3S2-216ENST00000617003 STRCQ7RTU9 1775 aa24.35■■□□□ 1.49
AP3S2-216ENST00000617003 RAB3GAP2Q9H2M9 1393 aa24.35■■□□□ 1.49
AP3S2-216ENST00000617003 UGGT1Q9NYU2 1555 aa24.35■■□□□ 1.49
AP3S2-216ENST00000617003 PKD2Q13563 968 aa24.33■■□□□ 1.49
AP3S2-216ENST00000617003 SLC52A1Q9NWF4 448 aa24.33■■□□□ 1.49
AP3S2-216ENST00000617003 NCKAP5LQ9HCH0 1330 aa24.32■■□□□ 1.48
AP3S2-216ENST00000617003 ACIN1Q9UKV3 1341 aaKnown RBP24.3■■□□□ 1.48
AP3S2-216ENST00000617003 MPHOSPH9Q99550 1183 aa24.3■■□□□ 1.48
AP3S2-216ENST00000617003 STAG3Q9UJ98 1225 aa24.3■■□□□ 1.48
AP3S2-216ENST00000617003 PIK3C2BO00750 1634 aa24.3■■□□□ 1.48
AP3S2-216ENST00000617003 UBR1Q8IWV7 1749 aa24.29■■□□□ 1.48
AP3S2-216ENST00000617003 PLA2R1Q13018 1463 aa24.28■■□□□ 1.48
AP3S2-216ENST00000617003 HRCP23327 699 aa24.27■■□□□ 1.48
AP3S2-216ENST00000617003 DMRT2Q9Y5R5 561 aa24.27■■□□□ 1.48
AP3S2-216ENST00000617003 PTPRTO14522 1441 aa24.26■■□□□ 1.47
AP3S2-216ENST00000617003 TRIM26Q12899 539 aaPredicted RBP24.25■■□□□ 1.47
AP3S2-216ENST00000617003 FOXD1Q16676 465 aa24.25■■□□□ 1.47
AP3S2-216ENST00000617003 ANKLE2Q86XL3 938 aa24.25■■□□□ 1.47
AP3S2-216ENST00000617003 SPHKAPQ2M3C7 1700 aa24.25■■□□□ 1.47
AP3S2-216ENST00000617003 CHGAP10645 457 aaKnown RBP24.23■■□□□ 1.47
AP3S2-216ENST00000617003 MYO5BQ9ULV0 1848 aa24.21■■□□□ 1.47
AP3S2-216ENST00000617003 KDM5AP29375 1690 aaKnown RBP24.2■■□□□ 1.46
AP3S2-216ENST00000617003 ADGRB3O60242 1522 aa24.19■■□□□ 1.46
AP3S2-216ENST00000617003 LTKP29376 864 aa24.19■■□□□ 1.46
AP3S2-216ENST00000617003 TXNDC2Q86VQ3 553 aa24.18■■□□□ 1.46
AP3S2-216ENST00000617003 POLR1AO95602 1720 aaPredicted RBP24.18■■□□□ 1.46
AP3S2-216ENST00000617003 TMEM2Q9UHN6 1383 aa24.17■■□□□ 1.46
AP3S2-216ENST00000617003 ARHGAP23Q9P227 1491 aa24.17■■□□□ 1.46
AP3S2-216ENST00000617003 TMEM131LA2VDJ0 1609 aa24.17■■□□□ 1.46
AP3S2-216ENST00000617003 SLIT1O75093 1534 aa24.16■■□□□ 1.46
AP3S2-216ENST00000617003 TRPM2O94759 1503 aa24.16■■□□□ 1.46
AP3S2-216ENST00000617003 EID1Q9Y6B2 187 aa24.15■■□□□ 1.46
AP3S2-216ENST00000617003 NEURL4Q96JN8 1562 aa24.14■■□□□ 1.46
AP3S2-216ENST00000617003 CLTCL1P53675 1640 aa24.14■■□□□ 1.45
AP3S2-216ENST00000617003 MED14O60244 1454 aa24.11■■□□□ 1.45
AP3S2-216ENST00000617003 NPHP4O75161 1426 aaPredicted RBP24.11■■□□□ 1.45
AP3S2-216ENST00000617003 SCAF11Q99590 1463 aaKnown RBP24.11■■□□□ 1.45
AP3S2-216ENST00000617003 KIF1BO60333 1816 aa24.09■■□□□ 1.45
AP3S2-216ENST00000617003 RIMS2Q9UQ26 1411 aa24.08■■□□□ 1.45
AP3S2-216ENST00000617003 HDGFP51858 240 aaKnown RBP24.08■■□□□ 1.44
AP3S2-216ENST00000617003 ZNF326Q5BKZ1 582 aaKnown RBP24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms