RNA–Protein interactions for RNA: ENST00000616566.4

PGM3-215, Transcript of phosphoglucomutase 3, humanhuman

TSL 2 BASIC

Gene PGM3, Length 5,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGM3-215ENST00000616566 TARBP1Q13395 1621 aaKnown RBP8.39□□□□□ -1.07
PGM3-215ENST00000616566 PANK3Q9H999 370 aa8.39□□□□□ -1.07
PGM3-215ENST00000616566 DISP1Q96F81 1524 aa8.38□□□□□ -1.07
PGM3-215ENST00000616566 CRBNQ96SW2 442 aa8.38□□□□□ -1.07
PGM3-215ENST00000616566 TMF1P82094 1093 aa8.38□□□□□ -1.07
PGM3-215ENST00000616566 CCDC144AA2RUR9 1427 aa8.38□□□□□ -1.07
PGM3-215ENST00000616566 RALGAPBQ86X10 1494 aa8.37□□□□□ -1.07
PGM3-215ENST00000616566 IFT140Q96RY7 1462 aa8.37□□□□□ -1.07
PGM3-215ENST00000616566 KIAA0556O60303 1618 aa8.37□□□□□ -1.07
PGM3-215ENST00000616566 PPM1GO15355 546 aaPredicted RBP8.37□□□□□ -1.07
PGM3-215ENST00000616566 RTN4Q9NQC3 1192 aaKnown RBP8.37□□□□□ -1.07
PGM3-215ENST00000616566 KNSTRNQ9Y448 316 aa8.37□□□□□ -1.07
PGM3-215ENST00000616566 RAPGEF6Q8TEU7 1601 aa8.37□□□□□ -1.07
PGM3-215ENST00000616566 SKAP1Q86WV1 359 aa8.37□□□□□ -1.07
PGM3-215ENST00000616566 GRIN2AQ12879 1464 aa8.36□□□□□ -1.07
PGM3-215ENST00000616566 DDRGK1Q96HY6 314 aa8.36□□□□□ -1.07
PGM3-215ENST00000616566 LRPPRCP42704 1394 aaKnown RBP8.36□□□□□ -1.07
PGM3-215ENST00000616566 MS4A1P11836 297 aa8.36□□□□□ -1.07
PGM3-215ENST00000616566 BACH2Q9BYV9 841 aa8.36□□□□□ -1.07
PGM3-215ENST00000616566 PBRM1Q86U86 1689 aa8.35□□□□□ -1.07
PGM3-215ENST00000616566 MBD5Q9P267 1494 aa8.35□□□□□ -1.07
PGM3-215ENST00000616566 RGS3P49796 1198 aa8.35□□□□□ -1.07
PGM3-215ENST00000616566 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.35□□□□□ -1.07
PGM3-215ENST00000616566 BCORL1Q5H9F3 1711 aa8.35□□□□□ -1.07
PGM3-215ENST00000616566 ERCC6Q03468 1493 aa8.34□□□□□ -1.07
PGM3-215ENST00000616566 UHRF1BP1Q6BDS2 1440 aa8.34□□□□□ -1.07
PGM3-215ENST00000616566 SLC4A3P48751 1232 aa8.34□□□□□ -1.07
PGM3-215ENST00000616566 KIF14Q15058 1648 aa8.34□□□□□ -1.08
PGM3-215ENST00000616566 ADGRL2O95490 1459 aa8.34□□□□□ -1.08
PGM3-215ENST00000616566 KDM5CP41229 1560 aa8.33□□□□□ -1.08
PGM3-215ENST00000616566 ADAMTS8Q9UP79 889 aa8.33□□□□□ -1.08
PGM3-215ENST00000616566 CANXP27824 592 aaKnown RBP8.33□□□□□ -1.08
PGM3-215ENST00000616566 PARD3Q8TEW0 1356 aa8.32□□□□□ -1.08
PGM3-215ENST00000616566 RSPH4AQ5TD94 716 aa8.32□□□□□ -1.08
PGM3-215ENST00000616566 MAGI1Q96QZ7 1491 aaPredicted RBP8.32□□□□□ -1.08
PGM3-215ENST00000616566 C20orf194Q5TEA3 1177 aa8.31□□□□□ -1.08
PGM3-215ENST00000616566 PER1O15534 1290 aaPredicted RBP8.31□□□□□ -1.08
PGM3-215ENST00000616566 GOLGA2Q08379 1002 aa8.31□□□□□ -1.08
PGM3-215ENST00000616566 USP35Q9P2H5 1018 aa8.31□□□□□ -1.08
PGM3-215ENST00000616566 ARHGEF12Q9NZN5 1544 aa8.31□□□□□ -1.08
PGM3-215ENST00000616566 ITSN2Q9NZM3 1697 aa8.31□□□□□ -1.08
PGM3-215ENST00000616566 CCDC146Q8IYE0 955 aa8.31□□□□□ -1.08
PGM3-215ENST00000616566 WASHC2CQ9Y4E1 1318 aa8.3□□□□□ -1.08
PGM3-215ENST00000616566 DISP3Q9P2K9 1392 aa8.3□□□□□ -1.08
PGM3-215ENST00000616566 PTPRGP23470 1445 aa8.3□□□□□ -1.08
PGM3-215ENST00000616566 IL27Q8NEV9 243 aa8.3□□□□□ -1.08
PGM3-215ENST00000616566 CDCA8Q53HL2 280 aa8.3□□□□□ -1.08
PGM3-215ENST00000616566 ERBINQ96RT1 1412 aa8.29□□□□□ -1.08
PGM3-215ENST00000616566 CENPQQ7L2Z9 268 aaPredicted RBP8.29□□□□□ -1.08
PGM3-215ENST00000616566 PRAG1Q86YV5 1406 aa8.29□□□□□ -1.08
PGM3-215ENST00000616566 ATP10BO94823 1461 aa8.28□□□□□ -1.08
PGM3-215ENST00000616566 TESK2Q96S53 571 aa8.28□□□□□ -1.08
PGM3-215ENST00000616566 PPP2R1AP30153 589 aa8.28□□□□□ -1.08
PGM3-215ENST00000616566 SYNJ2O15056 1496 aa8.28□□□□□ -1.08
PGM3-215ENST00000616566 ADGBQ8N7X0 1667 aa8.28□□□□□ -1.08
PGM3-215ENST00000616566 FAM161AQ3B820 660 aa8.27□□□□□ -1.08
PGM3-215ENST00000616566 CCDC141Q6ZP82 1450 aa8.27□□□□□ -1.08
PGM3-215ENST00000616566 SHANK2Q9UPX8 1470 aa8.27□□□□□ -1.09
PGM3-215ENST00000616566 POLR1AO95602 1720 aaPredicted RBP8.27□□□□□ -1.09
PGM3-215ENST00000616566 NEUROD2Q15784 382 aa8.27□□□□□ -1.09
PGM3-215ENST00000616566 APAF1O14727 1248 aa8.26□□□□□ -1.09
PGM3-215ENST00000616566 NFKBIBQ15653 356 aa8.26□□□□□ -1.09
PGM3-215ENST00000616566 FAM135AQ9P2D6 1515 aa8.26□□□□□ -1.09
PGM3-215ENST00000616566 FRAT1Q92837 279 aaPredicted RBP8.25□□□□□ -1.09
PGM3-215ENST00000616566 CHGAP10645 457 aaKnown RBP8.25□□□□□ -1.09
PGM3-215ENST00000616566 GSE1Q14687 1217 aa8.25□□□□□ -1.09
PGM3-215ENST00000616566 TNNT2P45379 298 aaPredicted RBP8.25□□□□□ -1.09
PGM3-215ENST00000616566 DUSP27Q5VZP5 1158 aa8.25□□□□□ -1.09
PGM3-215ENST00000616566 EIF4G3O43432 1585 aaKnown RBP8.24□□□□□ -1.09
PGM3-215ENST00000616566 ABCC10Q5T3U5 1492 aa8.24□□□□□ -1.09
PGM3-215ENST00000616566 COL17A1Q9UMD9 1497 aaPredicted RBP8.24□□□□□ -1.09
PGM3-215ENST00000616566 ARHGAP5Q13017 1502 aa8.24□□□□□ -1.09
PGM3-215ENST00000616566 EFCAB2Q5VUJ9 269 aa8.24□□□□□ -1.09
PGM3-215ENST00000616566 PLEKHH2Q8IVE3 1493 aa8.24□□□□□ -1.09
PGM3-215ENST00000616566 A2MP01023 1474 aa8.23□□□□□ -1.09
PGM3-215ENST00000616566 CEP170Q5SW79 1584 aa8.23□□□□□ -1.09
PGM3-215ENST00000616566 PLEKHH1Q9ULM0 1364 aa8.23□□□□□ -1.09
PGM3-215ENST00000616566 GPRASP1Q5JY77 1395 aa8.23□□□□□ -1.09
PGM3-215ENST00000616566 BCAR3O75815 825 aa8.23□□□□□ -1.09
PGM3-215ENST00000616566 ANO8Q9HCE9 1232 aaPredicted RBP8.23□□□□□ -1.09
PGM3-215ENST00000616566 BRPF3Q9ULD4 1205 aa8.22□□□□□ -1.09
PGM3-215ENST00000616566 BLMP54132 1417 aaPredicted RBP8.22□□□□□ -1.09
PGM3-215ENST00000616566 SLFN5Q08AF3 891 aa8.22□□□□□ -1.09
PGM3-215ENST00000616566 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.22□□□□□ -1.09
PGM3-215ENST00000616566 UPF2Q9HAU5 1272 aaKnown RBP8.21□□□□□ -1.09
PGM3-215ENST00000616566 COG6Q9Y2V7 657 aa8.21□□□□□ -1.09
PGM3-215ENST00000616566 E9PSI1 815 aa8.21□□□□□ -1.09
PGM3-215ENST00000616566 AMER1Q5JTC6 1135 aaPredicted RBP8.21□□□□□ -1.09
PGM3-215ENST00000616566 SPAG9O60271 1321 aaKnown RBP8.21□□□□□ -1.1
PGM3-215ENST00000616566 CENPJQ9HC77 1338 aaPredicted RBP8.21□□□□□ -1.1
PGM3-215ENST00000616566 NUP160Q12769 1436 aa8.21□□□□□ -1.1
PGM3-215ENST00000616566 KDM5DQ9BY66 1539 aa8.21□□□□□ -1.1
PGM3-215ENST00000616566 EIF5BO60841 1220 aaKnown RBP8.21□□□□□ -1.1
PGM3-215ENST00000616566 BECN1Q14457 450 aa8.21□□□□□ -1.1
PGM3-215ENST00000616566 FRAT2O75474 233 aaPredicted RBP8.21□□□□□ -1.1
PGM3-215ENST00000616566 RRP7AQ9Y3A4 280 aaKnown RBP8.21□□□□□ -1.1
PGM3-215ENST00000616566 ARXQ96QS3 562 aa8.2□□□□□ -1.1
PGM3-215ENST00000616566 SLKQ9H2G2 1235 aaPredicted RBP8.2□□□□□ -1.1
PGM3-215ENST00000616566 KDM2BQ8NHM5 1336 aa8.2□□□□□ -1.1
PGM3-215ENST00000616566 CROCC2H7BZ55 1655 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms