RNA–Protein interactions for RNA: ENST00000615940.4

LRTOMT-222, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, human

TSL 5 BASIC

Gene LRTOMT, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRTOMT-222	ENST00000615940	RNF216	Q9NWF9	866 aa	Predicted RBP	13.17	□□□□□ -0.3
LRTOMT-222	ENST00000615940	CERS3	Q8IU89	383 aa		13.16	□□□□□ -0.3
LRTOMT-222	ENST00000615940	FTSJ3	Q8IY81	847 aa	Known RBP	13.16	□□□□□ -0.3
LRTOMT-222	ENST00000615940	GRIPAP1	Q4V328	841 aa		13.15	□□□□□ -0.3
LRTOMT-222	ENST00000615940	ITSN2	Q9NZM3	1697 aa		13.15	□□□□□ -0.3
LRTOMT-222	ENST00000615940	FKBP8	Q14318	412 aa		13.14	□□□□□ -0.31
LRTOMT-222	ENST00000615940	PTMS	P20962	102 aa		13.14	□□□□□ -0.31
LRTOMT-222	ENST00000615940	SET	Q01105	290 aa	Predicted RBP	13.14	□□□□□ -0.31
LRTOMT-222	ENST00000615940	ARHGAP5	Q13017	1502 aa		13.13	□□□□□ -0.31
LRTOMT-222	ENST00000615940	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.13	□□□□□ -0.31
LRTOMT-222	ENST00000615940	PLCH2	O75038	1416 aa		13.13	□□□□□ -0.31
LRTOMT-222	ENST00000615940	ZBTB22	O15209	634 aa		13.12	□□□□□ -0.31
LRTOMT-222	ENST00000615940	CCNB3	Q8WWL7	1395 aa		13.12	□□□□□ -0.31
LRTOMT-222	ENST00000615940	NECTIN2	Q92692	538 aa		13.12	□□□□□ -0.31
LRTOMT-222	ENST00000615940	FANCA	O15360	1455 aa		13.11	□□□□□ -0.31
LRTOMT-222	ENST00000615940	TEX14	Q8IWB6	1497 aa		13.11	□□□□□ -0.31
LRTOMT-222	ENST00000615940	MCC	P23508	829 aa		13.1	□□□□□ -0.31
LRTOMT-222	ENST00000615940	ZNF692	Q9BU19	519 aa	Predicted RBP	13.1	□□□□□ -0.31
LRTOMT-222	ENST00000615940	CHMP4B	Q9H444	224 aa	Known RBP	13.1	□□□□□ -0.31
LRTOMT-222	ENST00000615940	TSHZ2	Q9NRE2	1034 aa		13.1	□□□□□ -0.31
LRTOMT-222	ENST00000615940	PHLDB1	Q86UU1	1377 aa		13.1	□□□□□ -0.31
LRTOMT-222	ENST00000615940	SAMD9L	Q8IVG5	1584 aa		13.1	□□□□□ -0.31
LRTOMT-222	ENST00000615940	CFAP74	Q9C0B2	1584 aa		13.1	□□□□□ -0.31
LRTOMT-222	ENST00000615940	ARAP3	Q8WWN8	1544 aa		13.09	□□□□□ -0.31
LRTOMT-222	ENST00000615940	KDM6B	O15054	1643 aa		13.09	□□□□□ -0.31
LRTOMT-222	ENST00000615940	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.09	□□□□□ -0.31
LRTOMT-222	ENST00000615940	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.09	□□□□□ -0.31
LRTOMT-222	ENST00000615940	YTHDC1	Q96MU7	727 aa	Known RBP	13.08	□□□□□ -0.32
LRTOMT-222	ENST00000615940	NBR1	Q14596	966 aa		13.08	□□□□□ -0.32
LRTOMT-222	ENST00000615940	CWC22	Q9HCG8	908 aa	Known RBP	13.08	□□□□□ -0.32
LRTOMT-222	ENST00000615940	AKNA	Q7Z591	1439 aa		13.08	□□□□□ -0.32
LRTOMT-222	ENST00000615940	ZNF644	Q9H582	1327 aa	Predicted RBP	13.07	□□□□□ -0.32
LRTOMT-222	ENST00000615940	NEO1	Q92859	1461 aa		13.07	□□□□□ -0.32
LRTOMT-222	ENST00000615940	WWC1	Q8IX03	1113 aa		13.07	□□□□□ -0.32
LRTOMT-222	ENST00000615940	PRDM16	Q9HAZ2	1276 aa		13.07	□□□□□ -0.32
LRTOMT-222	ENST00000615940	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.07	□□□□□ -0.32
LRTOMT-222	ENST00000615940	MYOM3	Q5VTT5	1437 aa		13.07	□□□□□ -0.32
LRTOMT-222	ENST00000615940	RICTOR	Q6R327	1708 aa		13.07	□□□□□ -0.32
LRTOMT-222	ENST00000615940	PTMA	P06454	111 aa	Known RBP	13.06	□□□□□ -0.32
LRTOMT-222	ENST00000615940	EFCAB2	Q5VUJ9	269 aa		13.06	□□□□□ -0.32
LRTOMT-222	ENST00000615940	BBX	Q8WY36	941 aa	Predicted RBP	13.06	□□□□□ -0.32
LRTOMT-222	ENST00000615940	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.06	□□□□□ -0.32
LRTOMT-222	ENST00000615940	NEFM	P07197	916 aa		13.06	□□□□□ -0.32
LRTOMT-222	ENST00000615940	ADGRL1	O94910	1474 aa		13.06	□□□□□ -0.32
LRTOMT-222	ENST00000615940	ABCC1	P33527	1531 aa		13.05	□□□□□ -0.32
LRTOMT-222	ENST00000615940	SYCP2	Q9BX26	1530 aa		13.05	□□□□□ -0.32
LRTOMT-222	ENST00000615940	ARHGEF12	Q9NZN5	1544 aa		13.05	□□□□□ -0.32
LRTOMT-222	ENST00000615940	FRMPD1	Q5SYB0	1578 aa		13.05	□□□□□ -0.32
LRTOMT-222	ENST00000615940	PTPN23	Q9H3S7	1636 aa		13.05	□□□□□ -0.32
LRTOMT-222	ENST00000615940	RAPGEF3	O95398	923 aa		13.04	□□□□□ -0.32
LRTOMT-222	ENST00000615940	SCAPER	Q9BY12	1400 aa		13.03	□□□□□ -0.32
LRTOMT-222	ENST00000615940	CAMSAP2	Q08AD1	1489 aa		13.03	□□□□□ -0.32
LRTOMT-222	ENST00000615940	FGD6	Q6ZV73	1430 aa		13.02	□□□□□ -0.33
LRTOMT-222	ENST00000615940	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.02	□□□□□ -0.33
LRTOMT-222	ENST00000615940	DENND4B	O75064	1496 aa	Predicted RBP	13	□□□□□ -0.33
LRTOMT-222	ENST00000615940	TRAPPC8	Q9Y2L5	1435 aa		13	□□□□□ -0.33
LRTOMT-222	ENST00000615940	MIA2	Q96PC5	1412 aa		12.99	□□□□□ -0.33
LRTOMT-222	ENST00000615940	GTF2E1	P29083	439 aa	Predicted RBP	12.99	□□□□□ -0.33
LRTOMT-222	ENST00000615940	AFAP1	Q8N556	730 aa		12.99	□□□□□ -0.33
LRTOMT-222	ENST00000615940	KCNG1	Q9UIX4	513 aa		12.99	□□□□□ -0.33
LRTOMT-222	ENST00000615940	POGZ	Q7Z3K3	1410 aa		12.98	□□□□□ -0.33
LRTOMT-222	ENST00000615940	CANX	P27824	592 aa	Known RBP	12.98	□□□□□ -0.33
LRTOMT-222	ENST00000615940	MBD5	Q9P267	1494 aa		12.97	□□□□□ -0.33
LRTOMT-222	ENST00000615940	KIDINS220	Q9ULH0	1771 aa		12.96	□□□□□ -0.33
LRTOMT-222	ENST00000615940	CROCC2	H7BZ55	1655 aa		12.96	□□□□□ -0.33
LRTOMT-222	ENST00000615940	TCOF1	Q13428	1488 aa	Known RBP	12.96	□□□□□ -0.33
LRTOMT-222	ENST00000615940	PLEKHH2	Q8IVE3	1493 aa		12.96	□□□□□ -0.33
LRTOMT-222	ENST00000615940	CNGB1	Q14028	1251 aa	Predicted RBP	12.96	□□□□□ -0.33
LRTOMT-222	ENST00000615940	FAM50A	Q14320	339 aa	Known RBP	12.96	□□□□□ -0.33
LRTOMT-222	ENST00000615940	KIAA1107	Q9UPP5	1409 aa		12.96	□□□□□ -0.33
LRTOMT-222	ENST00000615940	KDM5C	P41229	1560 aa		12.96	□□□□□ -0.34
LRTOMT-222	ENST00000615940	ZNF518A	Q6AHZ1	1483 aa		12.96	□□□□□ -0.34
LRTOMT-222	ENST00000615940	DNMT1	P26358	1616 aa	Known RBP	12.95	□□□□□ -0.34
LRTOMT-222	ENST00000615940	MAFG	O15525	162 aa		12.95	□□□□□ -0.34
LRTOMT-222	ENST00000615940	ARHGEF5	Q12774	1597 aa		12.95	□□□□□ -0.34
LRTOMT-222	ENST00000615940	RTL5	Q5HYW3	569 aa	Predicted RBP	12.95	□□□□□ -0.34
LRTOMT-222	ENST00000615940	FAM177A1	Q8N128	213 aa	Predicted RBP	12.95	□□□□□ -0.34
LRTOMT-222	ENST00000615940	ZNF526	Q8TF50	670 aa	Predicted RBP	12.95	□□□□□ -0.34
LRTOMT-222	ENST00000615940	HECW2	Q9P2P5	1572 aa		12.94	□□□□□ -0.34
LRTOMT-222	ENST00000615940	ANAPC15	P60006	121 aa		12.94	□□□□□ -0.34
LRTOMT-222	ENST00000615940	FAM43B	Q6ZT52	329 aa	Predicted RBP	12.94	□□□□□ -0.34
LRTOMT-222	ENST00000615940	DNAJC2	Q99543	621 aa	Known RBP	12.94	□□□□□ -0.34
LRTOMT-222	ENST00000615940	ZMYM4	Q5VZL5	1548 aa		12.94	□□□□□ -0.34
LRTOMT-222	ENST00000615940	YEATS2	Q9ULM3	1422 aa		12.93	□□□□□ -0.34
LRTOMT-222	ENST00000615940	ABCA6	Q8N139	1617 aa		12.93	□□□□□ -0.34
LRTOMT-222	ENST00000615940	SIGLEC1	Q9BZZ2	1709 aa		12.93	□□□□□ -0.34
LRTOMT-222	ENST00000615940	CCDC141	Q6ZP82	1450 aa		12.93	□□□□□ -0.34
LRTOMT-222	ENST00000615940	RRBP1	Q9P2E9	1410 aa	Known RBP	12.92	□□□□□ -0.34
LRTOMT-222	ENST00000615940	INO80	Q9ULG1	1556 aa	Predicted RBP	12.92	□□□□□ -0.34
LRTOMT-222	ENST00000615940	ADGB	Q8N7X0	1667 aa		12.91	□□□□□ -0.34
LRTOMT-222	ENST00000615940	ATP7A	Q04656	1500 aa		12.91	□□□□□ -0.34
LRTOMT-222	ENST00000615940	ZFYVE16	Q7Z3T8	1539 aa		12.91	□□□□□ -0.34
LRTOMT-222	ENST00000615940	ABCC5	O15440	1437 aa		12.9	□□□□□ -0.34
LRTOMT-222	ENST00000615940	ARHGEF40	Q8TER5	1519 aa		12.9	□□□□□ -0.34
LRTOMT-222	ENST00000615940	VGF	O15240	615 aa	Predicted RBP	12.9	□□□□□ -0.34
LRTOMT-222	ENST00000615940	ITGAE	P38570	1179 aa		12.9	□□□□□ -0.34
LRTOMT-222	ENST00000615940	FAM193A	P78312	1265 aa		12.9	□□□□□ -0.34
LRTOMT-222	ENST00000615940	DAPK1	P53355	1430 aa		12.9	□□□□□ -0.34
LRTOMT-222	ENST00000615940	RAD21	O60216	631 aa		12.89	□□□□□ -0.35
LRTOMT-222	ENST00000615940	CCDC27	Q2M243	656 aa		12.89	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms