RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 SPAG9O60271 1321 aaKnown RBP11.62□□□□□ -0.55
MUC1-227ENST00000615517 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.62□□□□□ -0.55
MUC1-227ENST00000615517 SYNMO15061 1565 aa11.62□□□□□ -0.55
MUC1-227ENST00000615517 ADGBQ8N7X0 1667 aa11.62□□□□□ -0.55
MUC1-227ENST00000615517 NPHP4O75161 1426 aaPredicted RBP11.61□□□□□ -0.55
MUC1-227ENST00000615517 FBXO31Q5XUX0 539 aaPredicted RBP11.61□□□□□ -0.55
MUC1-227ENST00000615517 HNRNPMP52272 730 aaKnown RBP eCLIP11.6□□□□□ -0.55
MUC1-227ENST00000615517 ANKLE2Q86XL3 938 aa11.6□□□□□ -0.55
MUC1-227ENST00000615517 TNRQ92752 1358 aa11.59□□□□□ -0.55
MUC1-227ENST00000615517 ZNF777Q9ULD5 760 aaPredicted RBP11.59□□□□□ -0.55
MUC1-227ENST00000615517 ZC3H13Q5T200 1668 aaKnown RBP11.59□□□□□ -0.55
MUC1-227ENST00000615517 EEA1Q15075 1411 aa11.58□□□□□ -0.56
MUC1-227ENST00000615517 UGGT1Q9NYU2 1555 aa11.56□□□□□ -0.56
MUC1-227ENST00000615517 PZPP20742 1482 aa11.56□□□□□ -0.56
MUC1-227ENST00000615517 GPATCH8Q9UKJ3 1502 aaKnown RBP11.55□□□□□ -0.56
MUC1-227ENST00000615517 THEMISQ8N1K5 641 aaPredicted RBP11.54□□□□□ -0.56
MUC1-227ENST00000615517 CFAP65Q6ZU64 1925 aaKnown RBP11.54□□□□□ -0.56
MUC1-227ENST00000615517 KIAA1107Q9UPP5 1409 aa11.53□□□□□ -0.56
MUC1-227ENST00000615517 SRCAPQ6ZRS2 3230 aa11.52□□□□□ -0.56
MUC1-227ENST00000615517 MIA2Q96PC5 1412 aa11.52□□□□□ -0.56
MUC1-227ENST00000615517 CCDC18Q5T9S5 1454 aa11.52□□□□□ -0.56
MUC1-227ENST00000615517 NLRP1Q9C000 1473 aa11.52□□□□□ -0.56
MUC1-227ENST00000615517 KDM5DQ9BY66 1539 aa11.52□□□□□ -0.57
MUC1-227ENST00000615517 FAM135AQ9P2D6 1515 aa11.52□□□□□ -0.57
MUC1-227ENST00000615517 UPF1Q92900 1129 aaKnown RBP eCLIP11.52□□□□□ -0.57
MUC1-227ENST00000615517 ROBO1Q9Y6N7 1651 aa11.52□□□□□ -0.57
MUC1-227ENST00000615517 FAM135BQ49AJ0 1406 aa11.52□□□□□ -0.57
MUC1-227ENST00000615517 EHMT2Q96KQ7 1210 aa11.51□□□□□ -0.57
MUC1-227ENST00000615517 PLEKHH2Q8IVE3 1493 aa11.5□□□□□ -0.57
MUC1-227ENST00000615517 DHX29Q7Z478 1369 aaKnown RBP11.49□□□□□ -0.57
MUC1-227ENST00000615517 CASKIN1Q8WXD9 1431 aa11.49□□□□□ -0.57
MUC1-227ENST00000615517 UBR1Q8IWV7 1749 aa11.49□□□□□ -0.57
MUC1-227ENST00000615517 UBTFP17480 764 aaKnown RBP11.47□□□□□ -0.57
MUC1-227ENST00000615517 PHLPP1O60346 1717 aa11.46□□□□□ -0.57
MUC1-227ENST00000615517 MBD5Q9P267 1494 aa11.46□□□□□ -0.57
MUC1-227ENST00000615517 KIF3BO15066 747 aa11.46□□□□□ -0.57
MUC1-227ENST00000615517 CFDP1Q9UEE9 299 aaPredicted RBP11.46□□□□□ -0.57
MUC1-227ENST00000615517 RTEL1-TNFRSF6BF6WH68 1400 aa11.45□□□□□ -0.58
MUC1-227ENST00000615517 ZNF644Q9H582 1327 aaPredicted RBP11.45□□□□□ -0.58
MUC1-227ENST00000615517 WASHC2CQ9Y4E1 1318 aa11.45□□□□□ -0.58
MUC1-227ENST00000615517 LTKP29376 864 aa11.43□□□□□ -0.58
MUC1-227ENST00000615517 MAP3K1Q13233 1512 aa11.43□□□□□ -0.58
MUC1-227ENST00000615517 SCAF11Q99590 1463 aaKnown RBP11.43□□□□□ -0.58
MUC1-227ENST00000615517 CCNB3Q8WWL7 1395 aa11.42□□□□□ -0.58
MUC1-227ENST00000615517 TRIM52Q96A61 297 aa11.42□□□□□ -0.58
MUC1-227ENST00000615517 NCOA2Q15596 1464 aa11.42□□□□□ -0.58
MUC1-227ENST00000615517 LRP6O75581 1613 aa11.42□□□□□ -0.58
MUC1-227ENST00000615517 TIAM1Q13009 1591 aa11.41□□□□□ -0.58
MUC1-227ENST00000615517 ERVK-7P63135 1459 aa11.41□□□□□ -0.58
MUC1-227ENST00000615517 FYCO1Q9BQS8 1478 aa11.41□□□□□ -0.58
MUC1-227ENST00000615517 ARHGAP23Q9P227 1491 aa11.41□□□□□ -0.58
MUC1-227ENST00000615517 TMEM94Q12767 1356 aa11.41□□□□□ -0.58
MUC1-227ENST00000615517 SLIT1O75093 1534 aa11.4□□□□□ -0.58
MUC1-227ENST00000615517 COL16A1Q07092 1604 aaPredicted RBP11.4□□□□□ -0.58
MUC1-227ENST00000615517 CEP152O94986 1710 aa11.4□□□□□ -0.58
MUC1-227ENST00000615517 ABCC3O15438 1527 aa11.4□□□□□ -0.59
MUC1-227ENST00000615517 RBM33Q96EV2 1170 aaKnown RBP11.39□□□□□ -0.59
MUC1-227ENST00000615517 JCADQ9P266 1359 aa11.39□□□□□ -0.59
MUC1-227ENST00000615517 TXNDC2Q86VQ3 553 aa11.38□□□□□ -0.59
MUC1-227ENST00000615517 LRRC9Q6ZRR7 1453 aa11.38□□□□□ -0.59
MUC1-227ENST00000615517 MROH1Q8NDA8 1641 aa11.36□□□□□ -0.59
MUC1-227ENST00000615517 ZNF772Q68DY9 489 aaPredicted RBP11.35□□□□□ -0.59
MUC1-227ENST00000615517 CCDC141Q6ZP82 1450 aa11.35□□□□□ -0.59
MUC1-227ENST00000615517 SHPRHQ149N8 1683 aa11.35□□□□□ -0.59
MUC1-227ENST00000615517 PIK3C2BO00750 1634 aa11.35□□□□□ -0.59
MUC1-227ENST00000615517 PRDM15P57071 1507 aaPredicted RBP11.35□□□□□ -0.59
MUC1-227ENST00000615517 TET3O43151 1660 aa11.34□□□□□ -0.59
MUC1-227ENST00000615517 CDK12Q9NYV4 1490 aaPredicted RBP11.34□□□□□ -0.59
MUC1-227ENST00000615517 KCNA6P17658 529 aa11.34□□□□□ -0.59
MUC1-227ENST00000615517 NWD1Q149M9 1564 aa11.33□□□□□ -0.6
MUC1-227ENST00000615517 RXRBP28702 533 aa11.33□□□□□ -0.6
MUC1-227ENST00000615517 PROSER2Q86WR7 435 aaPredicted RBP11.33□□□□□ -0.6
MUC1-227ENST00000615517 SLAIN2Q9P270 581 aa11.33□□□□□ -0.6
MUC1-227ENST00000615517 SPATA31A6Q5VVP1 1343 aa11.32□□□□□ -0.6
MUC1-227ENST00000615517 CAMSAP2Q08AD1 1489 aa11.32□□□□□ -0.6
MUC1-227ENST00000615517 MTUS2Q5JR59 1369 aa11.31□□□□□ -0.6
MUC1-227ENST00000615517 KDM5AP29375 1690 aaKnown RBP11.31□□□□□ -0.6
MUC1-227ENST00000615517 CHD2O14647 1828 aaKnown RBP11.31□□□□□ -0.6
MUC1-227ENST00000615517 MEX3CQ5U5Q3 659 aaKnown RBP11.31□□□□□ -0.6
MUC1-227ENST00000615517 FGD6Q6ZV73 1430 aa11.31□□□□□ -0.6
MUC1-227ENST00000615517 EIF2AK4Q9P2K8 1649 aaKnown RBP11.31□□□□□ -0.6
MUC1-227ENST00000615517 EID1Q9Y6B2 187 aa11.3□□□□□ -0.6
MUC1-227ENST00000615517 NKTRP30414 1462 aaKnown RBP11.3□□□□□ -0.6
MUC1-227ENST00000615517 MSH6P52701 1360 aa11.29□□□□□ -0.6
MUC1-227ENST00000615517 TMEM2Q9UHN6 1383 aa11.29□□□□□ -0.6
MUC1-227ENST00000615517 ARHGEF5Q12774 1597 aa11.29□□□□□ -0.6
MUC1-227ENST00000615517 RGS12O14924 1447 aa11.29□□□□□ -0.6
MUC1-227ENST00000615517 AHDC1Q5TGY3 1603 aaPredicted RBP11.29□□□□□ -0.6
MUC1-227ENST00000615517 SLC26A8Q96RN1 970 aa11.29□□□□□ -0.6
MUC1-227ENST00000615517 DIP2AQ14689 1571 aa11.28□□□□□ -0.6
MUC1-227ENST00000615517 SETBP1Q9Y6X0 1596 aa11.28□□□□□ -0.6
MUC1-227ENST00000615517 EHBP1L1Q8N3D4 1523 aa11.28□□□□□ -0.6
MUC1-227ENST00000615517 CEP162Q5TB80 1403 aa11.26□□□□□ -0.61
MUC1-227ENST00000615517 RSPH4AQ5TD94 716 aa11.26□□□□□ -0.61
MUC1-227ENST00000615517 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.26□□□□□ -0.61
MUC1-227ENST00000615517 EFCAB6Q5THR3 1501 aa11.25□□□□□ -0.61
MUC1-227ENST00000615517 MAST1Q9Y2H9 1570 aa11.25□□□□□ -0.61
MUC1-227ENST00000615517 AFF2P51816 1311 aa11.25□□□□□ -0.61
MUC1-227ENST00000615517 MYO5BQ9ULV0 1848 aa11.25□□□□□ -0.61
MUC1-227ENST00000615517 ARHGAP31Q2M1Z3 1444 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms