RNA–Protein interactions for RNA: ENST00000615229.4

ACACA-236, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 1,468 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-236ENST00000615229 ANKRD50Q9ULJ7 1429 aa32.72■■■□□ 2.83
ACACA-236ENST00000615229 CLTCQ00610 1675 aaKnown RBP32.71■■■□□ 2.83
ACACA-236ENST00000615229 NAIPQ13075 1403 aa32.7■■■□□ 2.83
ACACA-236ENST00000615229 CEP152O94986 1710 aa32.69■■■□□ 2.82
ACACA-236ENST00000615229 GGT6Q6P531 493 aa32.67■■■□□ 2.82
ACACA-236ENST00000615229 PRDM15P57071 1507 aaPredicted RBP32.67■■■□□ 2.82
ACACA-236ENST00000615229 HFM1A2PYH4 1435 aa32.67■■■□□ 2.82
ACACA-236ENST00000615229 UNC13BO14795 1591 aa32.65■■■□□ 2.82
ACACA-236ENST00000615229 MROH2AA6NES4 1674 aa32.63■■■□□ 2.81
ACACA-236ENST00000615229 ZC3H13Q5T200 1668 aaKnown RBP32.62■■■□□ 2.81
ACACA-236ENST00000615229 C3P01024 1663 aa32.61■■■□□ 2.81
ACACA-236ENST00000615229 KDM5DQ9BY66 1539 aa32.6■■■□□ 2.81
ACACA-236ENST00000615229 VWDEQ8N2E2 1590 aa32.57■■■□□ 2.81
ACACA-236ENST00000615229 ABCC3O15438 1527 aa32.57■■■□□ 2.8
ACACA-236ENST00000615229 FAM135AQ9P2D6 1515 aa32.57■■■□□ 2.8
ACACA-236ENST00000615229 PTPRMP28827 1452 aa32.56■■■□□ 2.8
ACACA-236ENST00000615229 CAMSAP1Q5T5Y3 1602 aa32.55■■■□□ 2.8
ACACA-236ENST00000615229 CNTLNQ9NXG0 1405 aa32.52■■■□□ 2.8
ACACA-236ENST00000615229 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.52■■■□□ 2.88e-12■■□□□ 13
ACACA-236ENST00000615229 CFAP65Q6ZU64 1925 aaKnown RBP32.51■■■□□ 2.79
ACACA-236ENST00000615229 IQGAP3Q86VI3 1631 aa32.51■■■□□ 2.79
ACACA-236ENST00000615229 PPP6R1Q9UPN7 881 aa32.48■■■□□ 2.79
ACACA-236ENST00000615229 ESF1Q9H501 851 aaKnown RBP32.48■■■□□ 2.79
ACACA-236ENST00000615229 SETD5Q9C0A6 1442 aa32.47■■■□□ 2.79
ACACA-236ENST00000615229 TRIM26Q12899 539 aaPredicted RBP32.47■■■□□ 2.79
ACACA-236ENST00000615229 WASHC2CQ9Y4E1 1318 aa32.46■■■□□ 2.79
ACACA-236ENST00000615229 LMTK2Q8IWU2 1503 aa32.45■■■□□ 2.79
ACACA-236ENST00000615229 TET3O43151 1660 aa32.45■■■□□ 2.78
ACACA-236ENST00000615229 KANK1Q14678 1352 aa32.44■■■□□ 2.78
ACACA-236ENST00000615229 PLPPR3Q6T4P5 718 aa32.43■■■□□ 2.78
ACACA-236ENST00000615229 ZMYM3Q14202 1370 aa32.42■■■□□ 2.78
ACACA-236ENST00000615229 CEBPAP49715 358 aaPredicted RBP32.42■■■□□ 2.78
ACACA-236ENST00000615229 EFCAB6Q5THR3 1501 aa32.41■■■□□ 2.78
ACACA-236ENST00000615229 RAB3GAP2Q9H2M9 1393 aa32.4■■■□□ 2.78
ACACA-236ENST00000615229 NUP155O75694 1391 aa32.38■■■□□ 2.77
ACACA-236ENST00000615229 E9PCH4 1651 aa32.38■■■□□ 2.77
ACACA-236ENST00000615229 PZPP20742 1482 aa32.37■■■□□ 2.77
ACACA-236ENST00000615229 PREX1Q8TCU6 1659 aa32.37■■■□□ 2.77
ACACA-236ENST00000615229 SETD1BQ9UPS6 1966 aaKnown RBP32.32■■■□□ 2.76
ACACA-236ENST00000615229 NPATQ14207 1427 aa32.31■■■□□ 2.76
ACACA-236ENST00000615229 ARHGAP31Q2M1Z3 1444 aa32.3■■■□□ 2.76
ACACA-236ENST00000615229 TRIM52Q96A61 297 aa32.29■■■□□ 2.76
ACACA-236ENST00000615229 SPATA31D1Q6ZQQ2 1576 aa32.27■■■□□ 2.76
ACACA-236ENST00000615229 ERVK-7P63135 1459 aa32.26■■■□□ 2.76
ACACA-236ENST00000615229 MYO3AQ8NEV4 1616 aa32.26■■■□□ 2.76
ACACA-236ENST00000615229 FBXO31Q5XUX0 539 aaPredicted RBP32.26■■■□□ 2.75
ACACA-236ENST00000615229 AEBP2Q6ZN18 517 aaPredicted RBP32.23■■■□□ 2.75
ACACA-236ENST00000615229 SPHKAPQ2M3C7 1700 aa32.22■■■□□ 2.75
ACACA-236ENST00000615229 RPRD2Q5VT52 1461 aaKnown RBP32.21■■■□□ 2.75
ACACA-236ENST00000615229 SYNMO15061 1565 aa32.21■■■□□ 2.75
ACACA-236ENST00000615229 ZNF142P52746 1687 aaPredicted RBP32.18■■■□□ 2.74
ACACA-236ENST00000615229 TNRQ92752 1358 aa32.17■■■□□ 2.74
ACACA-236ENST00000615229 NOS1P29475 1434 aa32.14■■■□□ 2.74
ACACA-236ENST00000615229 HRCP23327 699 aa32.13■■■□□ 2.73
ACACA-236ENST00000615229 SLC4A1APQ9BWU0 796 aaKnown RBP32.13■■■□□ 2.73
ACACA-236ENST00000615229 PCGF6Q9BYE7 350 aa32.13■■■□□ 2.73
ACACA-236ENST00000615229 LMTK3Q96Q04 1460 aa32.11■■■□□ 2.73
ACACA-236ENST00000615229 CEP170BQ9Y4F5 1589 aaPredicted RBP32.11■■■□□ 2.73
ACACA-236ENST00000615229 UHRF1BP1Q6BDS2 1440 aa32.1■■■□□ 2.73
ACACA-236ENST00000615229 PKD2Q13563 968 aa32.1■■■□□ 2.73
ACACA-236ENST00000615229 MPHOSPH9Q99550 1183 aa32.1■■■□□ 2.73
ACACA-236ENST00000615229 PIK3C2BO00750 1634 aa32.09■■■□□ 2.73
ACACA-236ENST00000615229 UGGT1Q9NYU2 1555 aa32.09■■■□□ 2.73
ACACA-236ENST00000615229 ACIN1Q9UKV3 1341 aaKnown RBP32.08■■■□□ 2.73
ACACA-236ENST00000615229 MYO5BQ9ULV0 1848 aa32.08■■■□□ 2.73
ACACA-236ENST00000615229 FOXD1Q16676 465 aa32.05■■■□□ 2.72
ACACA-236ENST00000615229 UBR1Q8IWV7 1749 aa32.05■■■□□ 2.72
ACACA-236ENST00000615229 NLRP1Q9C000 1473 aa32.04■■■□□ 2.72
ACACA-236ENST00000615229 TRPM2O94759 1503 aa32.04■■■□□ 2.72
ACACA-236ENST00000615229 PTPRTO14522 1441 aa32.03■■■□□ 2.72
ACACA-236ENST00000615229 A2ML1A8K2U0 1454 aa32.03■■■□□ 2.72
ACACA-236ENST00000615229 CLTCL1P53675 1640 aa32.03■■■□□ 2.72
ACACA-236ENST00000615229 PLA2R1Q13018 1463 aa32.02■■■□□ 2.72
ACACA-236ENST00000615229 KDM5AP29375 1690 aaKnown RBP31.96■■■□□ 2.71
ACACA-236ENST00000615229 KIF1BO60333 1816 aa31.95■■■□□ 2.71
ACACA-236ENST00000615229 ADGRB3O60242 1522 aa31.95■■■□□ 2.71
ACACA-236ENST00000615229 TMEM131LA2VDJ0 1609 aa31.94■■■□□ 2.7
ACACA-236ENST00000615229 IDI1Q13907 227 aa31.93■■■□□ 2.7
ACACA-236ENST00000615229 HSPA2P54652 639 aa31.92■■■□□ 2.7
ACACA-236ENST00000615229 SLC52A1Q9NWF4 448 aa31.89■■■□□ 2.7
ACACA-236ENST00000615229 STRCQ7RTU9 1775 aa31.88■■■□□ 2.69
ACACA-236ENST00000615229 POLR1AO95602 1720 aaPredicted RBP31.87■■■□□ 2.69
ACACA-236ENST00000615229 DHX57Q6P158 1386 aaKnown RBP31.86■■■□□ 2.69
ACACA-236ENST00000615229 ANKRD30BQ9BXX2 1392 aa31.82■■■□□ 2.68
ACACA-236ENST00000615229 CCDC144AA2RUR9 1427 aa31.8■■■□□ 2.68
ACACA-236ENST00000615229 SLIT1O75093 1534 aa31.78■■■□□ 2.68
ACACA-236ENST00000615229 CHGAP10645 457 aaKnown RBP31.77■■■□□ 2.68
ACACA-236ENST00000615229 STAG3Q9UJ98 1225 aa31.77■■■□□ 2.68
ACACA-236ENST00000615229 ARHGAP23Q9P227 1491 aa31.76■■■□□ 2.68
ACACA-236ENST00000615229 THEMISQ8N1K5 641 aaPredicted RBP31.75■■■□□ 2.67
ACACA-236ENST00000615229 NEURL4Q96JN8 1562 aa31.75■■■□□ 2.67
ACACA-236ENST00000615229 PPLO60437 1756 aa31.71■■■□□ 2.67
ACACA-236ENST00000615229 IFT172Q9UG01 1749 aa31.71■■■□□ 2.67
ACACA-236ENST00000615229 TMEM2Q9UHN6 1383 aa31.71■■■□□ 2.67
ACACA-236ENST00000615229 ZFYVE9O95405 1425 aa31.69■■■□□ 2.66
ACACA-236ENST00000615229 SPATA31E1Q6ZUB1 1445 aa31.69■■■□□ 2.66
ACACA-236ENST00000615229 NEXMIFQ5QGS0 1516 aa31.68■■■□□ 2.66
ACACA-236ENST00000615229 NCKAP5LQ9HCH0 1330 aa31.67■■■□□ 2.66
ACACA-236ENST00000615229 RIMS2Q9UQ26 1411 aa31.66■■■□□ 2.66
ACACA-236ENST00000615229 SCAF11Q99590 1463 aaKnown RBP31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms