RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 DEPDC5O75140 1603 aa19.64■□□□□ 0.73
SRGAP2C-204ENST00000613462 RRP7BPQ9NSQ0 103 aa19.63■□□□□ 0.73
SRGAP2C-204ENST00000613462 ZC3H13Q5T200 1668 aaKnown RBP19.62■□□□□ 0.73
SRGAP2C-204ENST00000613462 ANKRD50Q9ULJ7 1429 aa19.6■□□□□ 0.73
SRGAP2C-204ENST00000613462 MROH2AA6NES4 1674 aa19.6■□□□□ 0.73
SRGAP2C-204ENST00000613462 RIMS1Q86UR5 1692 aaKnown RBP19.6■□□□□ 0.73
SRGAP2C-204ENST00000613462 PRDM15P57071 1507 aaPredicted RBP19.6■□□□□ 0.73
SRGAP2C-204ENST00000613462 HFM1A2PYH4 1435 aa19.59■□□□□ 0.73
SRGAP2C-204ENST00000613462 PPP6R1Q9UPN7 881 aa19.58■□□□□ 0.72
SRGAP2C-204ENST00000613462 MROH1Q8NDA8 1641 aa19.58■□□□□ 0.72
SRGAP2C-204ENST00000613462 UNC13BO14795 1591 aa19.57■□□□□ 0.72
SRGAP2C-204ENST00000613462 CLTCQ00610 1675 aaKnown RBP19.57■□□□□ 0.72
SRGAP2C-204ENST00000613462 KIF3BO15066 747 aa19.57■□□□□ 0.72
SRGAP2C-204ENST00000613462 CNTLNQ9NXG0 1405 aa19.56■□□□□ 0.72
SRGAP2C-204ENST00000613462 KDM5DQ9BY66 1539 aa19.56■□□□□ 0.72
SRGAP2C-204ENST00000613462 NAIPQ13075 1403 aa19.55■□□□□ 0.72
SRGAP2C-204ENST00000613462 MLECQ14165 292 aa19.54■□□□□ 0.72
SRGAP2C-204ENST00000613462 CEP152O94986 1710 aa19.54■□□□□ 0.72
SRGAP2C-204ENST00000613462 ESF1Q9H501 851 aaKnown RBP19.52■□□□□ 0.72
SRGAP2C-204ENST00000613462 C3P01024 1663 aa19.52■□□□□ 0.71
SRGAP2C-204ENST00000613462 GGT6Q6P531 493 aa19.51■□□□□ 0.71
SRGAP2C-204ENST00000613462 VWDEQ8N2E2 1590 aa19.5■□□□□ 0.71
SRGAP2C-204ENST00000613462 CAMSAP1Q5T5Y3 1602 aa19.5■□□□□ 0.71
SRGAP2C-204ENST00000613462 ABCC3O15438 1527 aa19.5■□□□□ 0.71
SRGAP2C-204ENST00000613462 KANK1Q14678 1352 aa19.49■□□□□ 0.71
SRGAP2C-204ENST00000613462 IQGAP3Q86VI3 1631 aa19.49■□□□□ 0.71
SRGAP2C-204ENST00000613462 ACIN1Q9UKV3 1341 aaKnown RBP19.47■□□□□ 0.71
SRGAP2C-204ENST00000613462 TET3O43151 1660 aa19.46■□□□□ 0.71
SRGAP2C-204ENST00000613462 LMTK2Q8IWU2 1503 aa19.46■□□□□ 0.71
SRGAP2C-204ENST00000613462 WASHC2CQ9Y4E1 1318 aa19.46■□□□□ 0.71
SRGAP2C-204ENST00000613462 HSPA2P54652 639 aa19.45■□□□□ 0.7
SRGAP2C-204ENST00000613462 TRIM26Q12899 539 aaPredicted RBP19.45■□□□□ 0.7
SRGAP2C-204ENST00000613462 SETD5Q9C0A6 1442 aa19.44■□□□□ 0.7
SRGAP2C-204ENST00000613462 ILDR2Q71H61 639 aa19.43■□□□□ 0.7
SRGAP2C-204ENST00000613462 SETD1BQ9UPS6 1966 aaKnown RBP19.43■□□□□ 0.7
SRGAP2C-204ENST00000613462 EFCAB6Q5THR3 1501 aa19.42■□□□□ 0.7
SRGAP2C-204ENST00000613462 CERKQ8TCT0 537 aa19.42■□□□□ 0.7
SRGAP2C-204ENST00000613462 PZPP20742 1482 aa19.41■□□□□ 0.7
SRGAP2C-204ENST00000613462 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.4■□□□□ 0.7
SRGAP2C-204ENST00000613462 ZMYM3Q14202 1370 aa19.4■□□□□ 0.7
SRGAP2C-204ENST00000613462 NPATQ14207 1427 aa19.39■□□□□ 0.69
SRGAP2C-204ENST00000613462 ARHGAP31Q2M1Z3 1444 aa19.39■□□□□ 0.69
SRGAP2C-204ENST00000613462 CFAP65Q6ZU64 1925 aaKnown RBP19.39■□□□□ 0.69
SRGAP2C-204ENST00000613462 NUP155O75694 1391 aa19.38■□□□□ 0.69
SRGAP2C-204ENST00000613462 RPRD2Q5VT52 1461 aaKnown RBP19.38■□□□□ 0.69
SRGAP2C-204ENST00000613462 PREX1Q8TCU6 1659 aa19.38■□□□□ 0.69
SRGAP2C-204ENST00000613462 E9PCH4 1651 aa19.37■□□□□ 0.69
SRGAP2C-204ENST00000613462 RAB3GAP2Q9H2M9 1393 aa19.36■□□□□ 0.69
SRGAP2C-204ENST00000613462 STRCQ7RTU9 1775 aa19.34■□□□□ 0.69
SRGAP2C-204ENST00000613462 HRCP23327 699 aa19.34■□□□□ 0.69
SRGAP2C-204ENST00000613462 SPATA31D1Q6ZQQ2 1576 aa19.34■□□□□ 0.69
SRGAP2C-204ENST00000613462 SOCS7O14512 581 aa19.32■□□□□ 0.68
SRGAP2C-204ENST00000613462 MYO3AQ8NEV4 1616 aa19.32■□□□□ 0.68
SRGAP2C-204ENST00000613462 SPHKAPQ2M3C7 1700 aa19.31■□□□□ 0.68
SRGAP2C-204ENST00000613462 ZNF142P52746 1687 aaPredicted RBP19.31■□□□□ 0.68
SRGAP2C-204ENST00000613462 ERVK-7P63135 1459 aa19.31■□□□□ 0.68
SRGAP2C-204ENST00000613462 TRIM52Q96A61 297 aa19.3■□□□□ 0.68
SRGAP2C-204ENST00000613462 CEBPAP49715 358 aaPredicted RBP19.29■□□□□ 0.68
SRGAP2C-204ENST00000613462 PLPPR3Q6T4P5 718 aa19.27■□□□□ 0.68
SRGAP2C-204ENST00000613462 DISP3Q9P2K9 1392 aa19.27■□□□□ 0.68
SRGAP2C-204ENST00000613462 TNRQ92752 1358 aa19.26■□□□□ 0.67
SRGAP2C-204ENST00000613462 NLRP1Q9C000 1473 aa19.26■□□□□ 0.67
SRGAP2C-204ENST00000613462 KDM5AP29375 1690 aaKnown RBP19.25■□□□□ 0.67
SRGAP2C-204ENST00000613462 NOS1P29475 1434 aa19.25■□□□□ 0.67
SRGAP2C-204ENST00000613462 UHRF1BP1Q6BDS2 1440 aa19.25■□□□□ 0.67
SRGAP2C-204ENST00000613462 SYNMO15061 1565 aa19.24■□□□□ 0.67
SRGAP2C-204ENST00000613462 CEP170BQ9Y4F5 1589 aaPredicted RBP19.24■□□□□ 0.67
SRGAP2C-204ENST00000613462 SLC4A1APQ9BWU0 796 aaKnown RBP19.24■□□□□ 0.67
SRGAP2C-204ENST00000613462 PIK3C2BO00750 1634 aa19.23■□□□□ 0.67
SRGAP2C-204ENST00000613462 TRPM2O94759 1503 aa19.21■□□□□ 0.67
SRGAP2C-204ENST00000613462 FBXO31Q5XUX0 539 aaPredicted RBP19.21■□□□□ 0.67
SRGAP2C-204ENST00000613462 A2ML1A8K2U0 1454 aa19.2■□□□□ 0.66
SRGAP2C-204ENST00000613462 UBR1Q8IWV7 1749 aa19.2■□□□□ 0.66
SRGAP2C-204ENST00000613462 MPHOSPH9Q99550 1183 aa19.19■□□□□ 0.66
SRGAP2C-204ENST00000613462 KIF1BO60333 1816 aa19.18■□□□□ 0.66
SRGAP2C-204ENST00000613462 PTPRTO14522 1441 aa19.18■□□□□ 0.66
SRGAP2C-204ENST00000613462 PKD2Q13563 968 aa19.18■□□□□ 0.66
SRGAP2C-204ENST00000613462 SLC52A1Q9NWF4 448 aa19.16■□□□□ 0.66
SRGAP2C-204ENST00000613462 UGGT1Q9NYU2 1555 aa19.15■□□□□ 0.66
SRGAP2C-204ENST00000613462 MYO5BQ9ULV0 1848 aa19.15■□□□□ 0.66
SRGAP2C-204ENST00000613462 ADGRB3O60242 1522 aa19.15■□□□□ 0.66
SRGAP2C-204ENST00000613462 LTBP4Q8N2S1 1624 aa19.14■□□□□ 0.66
SRGAP2C-204ENST00000613462 PCGF6Q9BYE7 350 aa19.14■□□□□ 0.65
SRGAP2C-204ENST00000613462 CLTCL1P53675 1640 aa19.14■□□□□ 0.65
SRGAP2C-204ENST00000613462 POLR1AO95602 1720 aaPredicted RBP19.12■□□□□ 0.65
SRGAP2C-204ENST00000613462 TMEM131LA2VDJ0 1609 aa19.11■□□□□ 0.65
SRGAP2C-204ENST00000613462 PLA2R1Q13018 1463 aa19.09■□□□□ 0.65
SRGAP2C-204ENST00000613462 CCDC144AA2RUR9 1427 aa19.08■□□□□ 0.64
SRGAP2C-204ENST00000613462 IDI1Q13907 227 aa19.07■□□□□ 0.64
SRGAP2C-204ENST00000613462 DMRT2Q9Y5R5 561 aa19.07■□□□□ 0.64
SRGAP2C-204ENST00000613462 NEURL4Q96JN8 1562 aa19.06■□□□□ 0.64
SRGAP2C-204ENST00000613462 THEMISQ8N1K5 641 aaPredicted RBP19.06■□□□□ 0.64
SRGAP2C-204ENST00000613462 SLIT1O75093 1534 aa19.05■□□□□ 0.64
SRGAP2C-204ENST00000613462 FOXD1Q16676 465 aa19.05■□□□□ 0.64
SRGAP2C-204ENST00000613462 STAG3Q9UJ98 1225 aa19.05■□□□□ 0.64
SRGAP2C-204ENST00000613462 IQSEC2Q5JU85 1478 aa19.03■□□□□ 0.64
SRGAP2C-204ENST00000613462 ARHGAP23Q9P227 1491 aa19.03■□□□□ 0.64
SRGAP2C-204ENST00000613462 ANKRD30BQ9BXX2 1392 aa19.03■□□□□ 0.64
SRGAP2C-204ENST00000613462 DHX57Q6P158 1386 aaKnown RBP19.02■□□□□ 0.64
SRGAP2C-204ENST00000613462 TMEM2Q9UHN6 1383 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms