RNA–Protein interactions for RNA: ENST00000613104.1

ATF3-210, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-210ENST00000613104 DUOX2Q9NRD8 1548 aa14.06□□□□□ -0.16
ATF3-210ENST00000613104 KIF15Q9NS87 1388 aa14.06□□□□□ -0.16
ATF3-210ENST00000613104 SIGLEC1Q9BZZ2 1709 aa14.05□□□□□ -0.16
ATF3-210ENST00000613104 RRP7BPQ9NSQ0 103 aa14.05□□□□□ -0.16
ATF3-210ENST00000613104 DHX29Q7Z478 1369 aaKnown RBP14.05□□□□□ -0.16
ATF3-210ENST00000613104 GCC2Q8IWJ2 1684 aa14.04□□□□□ -0.16
ATF3-210ENST00000613104 HFM1A2PYH4 1435 aa14.04□□□□□ -0.16
ATF3-210ENST00000613104 AGLP35573 1532 aa14.04□□□□□ -0.16
ATF3-210ENST00000613104 BCORL1Q5H9F3 1711 aa14.04□□□□□ -0.16
ATF3-210ENST00000613104 NAIPQ13075 1403 aa14.03□□□□□ -0.16
ATF3-210ENST00000613104 EIF2AK4Q9P2K8 1649 aaKnown RBP14.02□□□□□ -0.16
ATF3-210ENST00000613104 ERBINQ96RT1 1412 aa14.02□□□□□ -0.16
ATF3-210ENST00000613104 HOXD11P31277 338 aaPredicted RBP14.01□□□□□ -0.17
ATF3-210ENST00000613104 ANKRD50Q9ULJ7 1429 aa14□□□□□ -0.17
ATF3-210ENST00000613104 RNF17Q9BXT8 1623 aaKnown RBP13.97□□□□□ -0.17
ATF3-210ENST00000613104 KDM4FA0A1W2PPD8 638 aa13.97□□□□□ -0.17
ATF3-210ENST00000613104 DEPDC5O75140 1603 aa13.97□□□□□ -0.17
ATF3-210ENST00000613104 SETD5Q9C0A6 1442 aa13.96□□□□□ -0.18
ATF3-210ENST00000613104 MROH1Q8NDA8 1641 aa13.95□□□□□ -0.18
ATF3-210ENST00000613104 KIF3BO15066 747 aa13.95□□□□□ -0.18
ATF3-210ENST00000613104 UNC13BO14795 1591 aa13.95□□□□□ -0.18
ATF3-210ENST00000613104 ARID4BQ4LE39 1312 aaPredicted RBP13.93□□□□□ -0.18
ATF3-210ENST00000613104 PRDM15P57071 1507 aaPredicted RBP13.93□□□□□ -0.18
ATF3-210ENST00000613104 RAB3GAP2Q9H2M9 1393 aa13.92□□□□□ -0.18
ATF3-210ENST00000613104 VWDEQ8N2E2 1590 aa13.92□□□□□ -0.18
ATF3-210ENST00000613104 ADAMTSL3P82987 1691 aa13.91□□□□□ -0.18
ATF3-210ENST00000613104 FAM135AQ9P2D6 1515 aa13.91□□□□□ -0.18
ATF3-210ENST00000613104 HRCP23327 699 aa13.91□□□□□ -0.18
ATF3-210ENST00000613104 PCGF6Q9BYE7 350 aa13.91□□□□□ -0.18
ATF3-210ENST00000613104 KDM5DQ9BY66 1539 aa13.9□□□□□ -0.18
ATF3-210ENST00000613104 GGT6Q6P531 493 aa13.9□□□□□ -0.18
ATF3-210ENST00000613104 ACIN1Q9UKV3 1341 aaKnown RBP13.9□□□□□ -0.19
ATF3-210ENST00000613104 MLECQ14165 292 aa13.89□□□□□ -0.19
ATF3-210ENST00000613104 ZC3H13Q5T200 1668 aaKnown RBP13.88□□□□□ -0.19
ATF3-210ENST00000613104 IQGAP3Q86VI3 1631 aa13.88□□□□□ -0.19
ATF3-210ENST00000613104 FER1L4A9Z1Z3 1794 aa13.88□□□□□ -0.19
ATF3-210ENST00000613104 ABCC3O15438 1527 aa13.87□□□□□ -0.19
ATF3-210ENST00000613104 LMTK2Q8IWU2 1503 aa13.87□□□□□ -0.19
ATF3-210ENST00000613104 CEP152O94986 1710 aa13.87□□□□□ -0.19
ATF3-210ENST00000613104 MADDQ8WXG6 1647 aa13.86□□□□□ -0.19
ATF3-210ENST00000613104 KANK1Q14678 1352 aa13.86□□□□□ -0.19
ATF3-210ENST00000613104 CLTCQ00610 1675 aaKnown RBP13.86□□□□□ -0.19
ATF3-210ENST00000613104 MROH2AA6NES4 1674 aa13.85□□□□□ -0.19
ATF3-210ENST00000613104 NUP155O75694 1391 aa13.85□□□□□ -0.19
ATF3-210ENST00000613104 CNTLNQ9NXG0 1405 aa13.85□□□□□ -0.19
ATF3-210ENST00000613104 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.85□□□□□ -0.19
ATF3-210ENST00000613104 PZPP20742 1482 aa13.84□□□□□ -0.19
ATF3-210ENST00000613104 TET3O43151 1660 aa13.84□□□□□ -0.19
ATF3-210ENST00000613104 WASHC2CQ9Y4E1 1318 aa13.84□□□□□ -0.19
ATF3-210ENST00000613104 CAMSAP1Q5T5Y3 1602 aa13.83□□□□□ -0.2
ATF3-210ENST00000613104 RIMS1Q86UR5 1692 aaKnown RBP13.83□□□□□ -0.2
ATF3-210ENST00000613104 TRIM52Q96A61 297 aa13.83□□□□□ -0.2
ATF3-210ENST00000613104 FOXD4L1Q9NU39 408 aa13.83□□□□□ -0.2
ATF3-210ENST00000613104 ZBTB22O15209 634 aa13.82□□□□□ -0.2
ATF3-210ENST00000613104 ARHGAP31Q2M1Z3 1444 aa13.81□□□□□ -0.2
ATF3-210ENST00000613104 EFCAB6Q5THR3 1501 aa13.81□□□□□ -0.2
ATF3-210ENST00000613104 ESF1Q9H501 851 aaKnown RBP13.81□□□□□ -0.2
ATF3-210ENST00000613104 ZMYM3Q14202 1370 aa13.8□□□□□ -0.2
ATF3-210ENST00000613104 E9PCH4 1651 aa13.79□□□□□ -0.2
ATF3-210ENST00000613104 C3P01024 1663 aa13.79□□□□□ -0.2
ATF3-210ENST00000613104 MPHOSPH9Q99550 1183 aa13.78□□□□□ -0.2
ATF3-210ENST00000613104 NPATQ14207 1427 aa13.78□□□□□ -0.2
ATF3-210ENST00000613104 PTPRMP28827 1452 aa13.78□□□□□ -0.2
ATF3-210ENST00000613104 RPRD2Q5VT52 1461 aaKnown RBP13.78□□□□□ -0.2
ATF3-210ENST00000613104 FBXO41Q8TF61 875 aa13.76□□□□□ -0.21
ATF3-210ENST00000613104 PREX1Q8TCU6 1659 aa13.75□□□□□ -0.21
ATF3-210ENST00000613104 SPATA31D1Q6ZQQ2 1576 aa13.75□□□□□ -0.21
ATF3-210ENST00000613104 CFAP65Q6ZU64 1925 aaKnown RBP13.74□□□□□ -0.21
ATF3-210ENST00000613104 PKD2Q13563 968 aa13.74□□□□□ -0.21
ATF3-210ENST00000613104 ERVK-7P63135 1459 aa13.74□□□□□ -0.21
ATF3-210ENST00000613104 NOS1P29475 1434 aa13.73□□□□□ -0.21
ATF3-210ENST00000613104 DHX57Q6P158 1386 aaKnown RBP13.73□□□□□ -0.21
ATF3-210ENST00000613104 CEBPAP49715 358 aaPredicted RBP13.73□□□□□ -0.21
ATF3-210ENST00000613104 PTPRTO14522 1441 aa13.73□□□□□ -0.21
ATF3-210ENST00000613104 FBXO31Q5XUX0 539 aaPredicted RBP13.72□□□□□ -0.21
ATF3-210ENST00000613104 SPHKAPQ2M3C7 1700 aa13.72□□□□□ -0.21
ATF3-210ENST00000613104 SYNMO15061 1565 aa13.71□□□□□ -0.22
ATF3-210ENST00000613104 SETD1BQ9UPS6 1966 aaKnown RBP13.7□□□□□ -0.22
ATF3-210ENST00000613104 PLA2R1Q13018 1463 aa13.69□□□□□ -0.22
ATF3-210ENST00000613104 TRPM2O94759 1503 aa13.69□□□□□ -0.22
ATF3-210ENST00000613104 TNRQ92752 1358 aa13.68□□□□□ -0.22
ATF3-210ENST00000613104 PIK3C2BO00750 1634 aa13.68□□□□□ -0.22
ATF3-210ENST00000613104 ANKRD30BQ9BXX2 1392 aa13.67□□□□□ -0.22
ATF3-210ENST00000613104 DCAF8L1A6NGE4 600 aa13.66□□□□□ -0.22
ATF3-210ENST00000613104 CLTCL1P53675 1640 aa13.65□□□□□ -0.22
ATF3-210ENST00000613104 MYO3AQ8NEV4 1616 aa13.65□□□□□ -0.22
ATF3-210ENST00000613104 NLRP1Q9C000 1473 aa13.65□□□□□ -0.22
ATF3-210ENST00000613104 UGGT1Q9NYU2 1555 aa13.64□□□□□ -0.23
ATF3-210ENST00000613104 SLC52A1Q9NWF4 448 aa13.64□□□□□ -0.23
ATF3-210ENST00000613104 ZNF142P52746 1687 aaPredicted RBP13.63□□□□□ -0.23
ATF3-210ENST00000613104 IDI1Q13907 227 aa13.63□□□□□ -0.23
ATF3-210ENST00000613104 KDM5AP29375 1690 aaKnown RBP13.62□□□□□ -0.23
ATF3-210ENST00000613104 A2ML1A8K2U0 1454 aa13.61□□□□□ -0.23
ATF3-210ENST00000613104 KIF1BO60333 1816 aa13.61□□□□□ -0.23
ATF3-210ENST00000613104 CCDC144AA2RUR9 1427 aa13.61□□□□□ -0.23
ATF3-210ENST00000613104 CEP170BQ9Y4F5 1589 aaPredicted RBP13.61□□□□□ -0.23
ATF3-210ENST00000613104 UHRF1BP1Q6BDS2 1440 aa13.6□□□□□ -0.23
ATF3-210ENST00000613104 UBR1Q8IWV7 1749 aa13.6□□□□□ -0.23
ATF3-210ENST00000613104 NEURL4Q96JN8 1562 aa13.6□□□□□ -0.23
ATF3-210ENST00000613104 TMEM131LA2VDJ0 1609 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms