RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 BAZ1BQ9UIG0 1483 aaKnown RBP10.74□□□□□ -0.69
TTC28-208ENST00000612946 REC8O95072 547 aa10.74□□□□□ -0.69
TTC28-208ENST00000612946 MNS1Q8NEH6 495 aa10.74□□□□□ -0.69
TTC28-208ENST00000612946 NINLQ9Y2I6 1382 aa10.74□□□□□ -0.69
TTC28-208ENST00000612946 KIF2AO00139 706 aaPredicted RBP10.74□□□□□ -0.69
TTC28-208ENST00000612946 MYO6Q9UM54 1294 aa10.74□□□□□ -0.69
TTC28-208ENST00000612946 BECN2A8MW95 431 aa10.73□□□□□ -0.69
TTC28-208ENST00000612946 ANKRD30AQ9BXX3 1397 aa10.73□□□□□ -0.69
TTC28-208ENST00000612946 EIF3JO75822 258 aaKnown RBP10.73□□□□□ -0.69
TTC28-208ENST00000612946 NFKBIBQ15653 356 aa10.73□□□□□ -0.69
TTC28-208ENST00000612946 NLRP13Q86W25 1043 aa10.73□□□□□ -0.69
TTC28-208ENST00000612946 ANO8Q9HCE9 1232 aaPredicted RBP10.73□□□□□ -0.69
TTC28-208ENST00000612946 NPM1P06748 294 aaKnown RBP eCLIP10.73□□□□□ -0.69
TTC28-208ENST00000612946 CTR9Q6PD62 1173 aa10.73□□□□□ -0.69
TTC28-208ENST00000612946 ANKRD20A12PQ8NF67 263 aa10.73□□□□□ -0.69
TTC28-208ENST00000612946 SPRYD3Q8NCJ5 442 aa10.72□□□□□ -0.69
TTC28-208ENST00000612946 KIAA0754O94854 1291 aa10.72□□□□□ -0.69
TTC28-208ENST00000612946 MCM5P33992 734 aa10.71□□□□□ -0.69
TTC28-208ENST00000612946 DDX11Q96FC9 970 aa10.71□□□□□ -0.7
TTC28-208ENST00000612946 MFAP1P55081 439 aaKnown RBP10.71□□□□□ -0.7
TTC28-208ENST00000612946 FAM184AQ8NB25 1140 aa10.7□□□□□ -0.7
TTC28-208ENST00000612946 A0A0G2JS52 829 aa10.7□□□□□ -0.7
TTC28-208ENST00000612946 RRP1P56182 461 aaKnown RBP10.7□□□□□ -0.7
TTC28-208ENST00000612946 CENPJQ9HC77 1338 aaPredicted RBP10.7□□□□□ -0.7
TTC28-208ENST00000612946 NEXNQ0ZGT2 675 aa10.7□□□□□ -0.7
TTC28-208ENST00000612946 DNAJC2Q99543 621 aaKnown RBP10.7□□□□□ -0.7
TTC28-208ENST00000612946 ROCK1Q13464 1354 aa10.7□□□□□ -0.7
TTC28-208ENST00000612946 PDIA4P13667 645 aaKnown RBP10.69□□□□□ -0.7
TTC28-208ENST00000612946 AXDND1Q5T1B0 1012 aaPredicted RBP10.69□□□□□ -0.7
TTC28-208ENST00000612946 TAF7LQ5H9L4 462 aa10.68□□□□□ -0.7
TTC28-208ENST00000612946 KDM2AQ9Y2K7 1162 aa10.68□□□□□ -0.7
TTC28-208ENST00000612946 ERLIN1O75477 346 aa10.68□□□□□ -0.7
TTC28-208ENST00000612946 TPRNQ4KMQ1 711 aa10.68□□□□□ -0.7
TTC28-208ENST00000612946 FMN1Q68DA7 1419 aa10.68□□□□□ -0.7
TTC28-208ENST00000612946 HOMER1Q86YM7 354 aa10.68□□□□□ -0.7
TTC28-208ENST00000612946 IFT57Q9NWB7 429 aa10.68□□□□□ -0.7
TTC28-208ENST00000612946 GOLGA2Q08379 1002 aa10.67□□□□□ -0.7
TTC28-208ENST00000612946 CIZ1Q9ULV3 898 aaPredicted RBP10.67□□□□□ -0.7
TTC28-208ENST00000612946 R3HCC1Q9Y3T6 440 aaKnown RBP10.67□□□□□ -0.7
TTC28-208ENST00000612946 ESPNB1AK53 854 aa10.67□□□□□ -0.7
TTC28-208ENST00000612946 IQCEQ6IPM2 695 aa10.67□□□□□ -0.7
TTC28-208ENST00000612946 MYBBP1AQ9BQG0 1328 aaKnown RBP10.67□□□□□ -0.7
TTC28-208ENST00000612946 CEP89Q96ST8 783 aa10.67□□□□□ -0.7
TTC28-208ENST00000612946 POLR3GO15318 223 aaPredicted RBP10.67□□□□□ -0.7
TTC28-208ENST00000612946 HIRIP3Q9BW71 556 aaPredicted RBP10.67□□□□□ -0.7
TTC28-208ENST00000612946 ITPRIPQ8IWB1 547 aa10.66□□□□□ -0.7
TTC28-208ENST00000612946 GIMAP7Q8NHV1 300 aa10.66□□□□□ -0.7
TTC28-208ENST00000612946 DYDC1Q8WWB3 177 aa10.66□□□□□ -0.7
TTC28-208ENST00000612946 DYNC1I1O14576 645 aa10.66□□□□□ -0.7
TTC28-208ENST00000612946 CHGAP10645 457 aaKnown RBP10.66□□□□□ -0.7
TTC28-208ENST00000612946 TXLNBQ8N3L3 684 aa10.66□□□□□ -0.7
TTC28-208ENST00000612946 CCAR2Q8N163 923 aaKnown RBP10.65□□□□□ -0.7
TTC28-208ENST00000612946 MCM2P49736 904 aa10.65□□□□□ -0.7
TTC28-208ENST00000612946 ZSCAN30Q86W11 494 aa10.65□□□□□ -0.7
TTC28-208ENST00000612946 UQCRHLA0A096LP55 91 aa10.65□□□□□ -0.7
TTC28-208ENST00000612946 UQCRHP07919 91 aa10.65□□□□□ -0.7
TTC28-208ENST00000612946 NAP1L2Q9ULW6 460 aaPredicted RBP10.65□□□□□ -0.7
TTC28-208ENST00000612946 CC2D1BQ5T0F9 858 aaKnown RBP10.64□□□□□ -0.71
TTC28-208ENST00000612946 LMOD3Q0VAK6 560 aa10.64□□□□□ -0.71
TTC28-208ENST00000612946 IRX3P78415 501 aaPredicted RBP10.64□□□□□ -0.71
TTC28-208ENST00000612946 ZNF592Q92610 1267 aa10.64□□□□□ -0.71
TTC28-208ENST00000612946 CHIC2Q9UKJ5 165 aa10.64□□□□□ -0.71
TTC28-208ENST00000612946 SSR1P43307 286 aaKnown RBP10.64□□□□□ -0.71
TTC28-208ENST00000612946 BRPF3Q9ULD4 1205 aa10.64□□□□□ -0.71
TTC28-208ENST00000612946 P3H3Q8IVL6 736 aa10.63□□□□□ -0.71
TTC28-208ENST00000612946 GTPBP4Q9BZE4 634 aaKnown RBP10.63□□□□□ -0.71
TTC28-208ENST00000612946 CCDC112Q8NEF3 446 aa10.63□□□□□ -0.71
TTC28-208ENST00000612946 RAB3GAP2Q9H2M9 1393 aa10.63□□□□□ -0.71
TTC28-208ENST00000612946 ARID3CA6NKF2 412 aa10.63□□□□□ -0.71
TTC28-208ENST00000612946 E9PSI1 815 aa10.62□□□□□ -0.71
TTC28-208ENST00000612946 MCM3P25205 808 aa10.62□□□□□ -0.71
TTC28-208ENST00000612946 RABEP1Q15276 862 aa10.62□□□□□ -0.71
TTC28-208ENST00000612946 NACADO15069 1562 aa10.62□□□□□ -0.71
TTC28-208ENST00000612946 IL27Q8NEV9 243 aa10.62□□□□□ -0.71
TTC28-208ENST00000612946 GOLGA6L10A6NI86 522 aa10.62□□□□□ -0.71
TTC28-208ENST00000612946 TSPY26PQ9H489 355 aa10.62□□□□□ -0.71
TTC28-208ENST00000612946 TIGD1Q96MW7 591 aa10.62□□□□□ -0.71
TTC28-208ENST00000612946 CGNQ9P2M7 1197 aaKnown RBP10.62□□□□□ -0.71
TTC28-208ENST00000612946 TRAK2O60296 914 aa10.61□□□□□ -0.71
TTC28-208ENST00000612946 HSPA5P11021 654 aaKnown RBP10.61□□□□□ -0.71
TTC28-208ENST00000612946 SASS6Q6UVJ0 657 aa10.61□□□□□ -0.71
TTC28-208ENST00000612946 KANK1Q14678 1352 aa10.61□□□□□ -0.71
TTC28-208ENST00000612946 H3BQV1 296 aa10.61□□□□□ -0.71
TTC28-208ENST00000612946 IFFO2Q5TF58 517 aa10.61□□□□□ -0.71
TTC28-208ENST00000612946 CNTLNQ9NXG0 1405 aa10.61□□□□□ -0.71
TTC28-208ENST00000612946 LRRFIP1Q32MZ4 808 aaKnown RBP10.6□□□□□ -0.71
TTC28-208ENST00000612946 SF3A1Q15459 793 aaKnown RBP10.6□□□□□ -0.71
TTC28-208ENST00000612946 RRP7BPQ9NSQ0 103 aa10.6□□□□□ -0.71
TTC28-208ENST00000612946 GRPEL1Q9HAV7 217 aa10.6□□□□□ -0.71
TTC28-208ENST00000612946 GBP3Q9H0R5 595 aa10.6□□□□□ -0.71
TTC28-208ENST00000612946 TPD52L1Q16890 204 aaPredicted RBP10.6□□□□□ -0.71
TTC28-208ENST00000612946 PLEKHH2Q8IVE3 1493 aa10.6□□□□□ -0.71
TTC28-208ENST00000612946 CWC22Q9HCG8 908 aaKnown RBP10.6□□□□□ -0.71
TTC28-208ENST00000612946 TTLL5Q6EMB2 1281 aa10.59□□□□□ -0.71
TTC28-208ENST00000612946 KAT6BQ8WYB5 2073 aa10.59□□□□□ -0.71
TTC28-208ENST00000612946 RUFY2Q8WXA3 655 aa10.59□□□□□ -0.71
TTC28-208ENST00000612946 ZMYND15Q9H091 742 aa10.59□□□□□ -0.71
TTC28-208ENST00000612946 PDCP20941 246 aa10.59□□□□□ -0.71
TTC28-208ENST00000612946 LUZP1Q86V48 1076 aa10.59□□□□□ -0.71
TTC28-208ENST00000612946 PRIMPOLQ96LW4 560 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms