RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 HECW2Q9P2P5 1572 aa17.81■□□□□ 0.44
CBWD1-220ENST00000612045 MAGI2Q86UL8 1455 aa17.81■□□□□ 0.44
CBWD1-220ENST00000612045 TEX14Q8IWB6 1497 aa17.81■□□□□ 0.44
CBWD1-220ENST00000612045 DHX29Q7Z478 1369 aaKnown RBP17.81■□□□□ 0.44
CBWD1-220ENST00000612045 TONSLQ96HA7 1378 aa17.8■□□□□ 0.44
CBWD1-220ENST00000612045 RICTORQ6R327 1708 aa17.79■□□□□ 0.44
CBWD1-220ENST00000612045 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.79■□□□□ 0.44
CBWD1-220ENST00000612045 IQGAP3Q86VI3 1631 aa17.79■□□□□ 0.44
CBWD1-220ENST00000612045 EIF2AK4Q9P2K8 1649 aaKnown RBP17.77■□□□□ 0.43
CBWD1-220ENST00000612045 RPRD2Q5VT52 1461 aaKnown RBP17.76■□□□□ 0.43
CBWD1-220ENST00000612045 DEPDC5O75140 1603 aa17.75■□□□□ 0.43
CBWD1-220ENST00000612045 A2MP01023 1474 aa17.75■□□□□ 0.43
CBWD1-220ENST00000612045 PPP1R15AO75807 674 aaPredicted RBP17.75■□□□□ 0.43
CBWD1-220ENST00000612045 FRMPD1Q5SYB0 1578 aa17.74■□□□□ 0.43
CBWD1-220ENST00000612045 ABCA6Q8N139 1617 aa17.74■□□□□ 0.43
CBWD1-220ENST00000612045 KIF3BO15066 747 aa17.74■□□□□ 0.43
CBWD1-220ENST00000612045 ZMYM4Q5VZL5 1548 aa17.7■□□□□ 0.42
CBWD1-220ENST00000612045 ZNF316A6NFI3 1004 aaPredicted RBP17.7■□□□□ 0.42
CBWD1-220ENST00000612045 DIP2CQ9Y2E4 1556 aa17.7■□□□□ 0.42
CBWD1-220ENST00000612045 PRDM15P57071 1507 aaPredicted RBP17.69■□□□□ 0.42
CBWD1-220ENST00000612045 KANK1Q14678 1352 aa17.69■□□□□ 0.42
CBWD1-220ENST00000612045 VWDEQ8N2E2 1590 aa17.69■□□□□ 0.42
CBWD1-220ENST00000612045 MROH1Q8NDA8 1641 aa17.68■□□□□ 0.42
CBWD1-220ENST00000612045 YEATS2Q9ULM3 1422 aa17.68■□□□□ 0.42
CBWD1-220ENST00000612045 L3MBTL2Q969R5 705 aa17.68■□□□□ 0.42
CBWD1-220ENST00000612045 RNF17Q9BXT8 1623 aaKnown RBP17.67■□□□□ 0.42
CBWD1-220ENST00000612045 BCORL1Q5H9F3 1711 aa17.67■□□□□ 0.42
CBWD1-220ENST00000612045 PLA2R1Q13018 1463 aa17.65■□□□□ 0.42
CBWD1-220ENST00000612045 COL17A1Q9UMD9 1497 aaPredicted RBP17.64■□□□□ 0.41
CBWD1-220ENST00000612045 TET3O43151 1660 aa17.64■□□□□ 0.41
CBWD1-220ENST00000612045 ATP10AO60312 1499 aa17.63■□□□□ 0.41
CBWD1-220ENST00000612045 E9PCH4 1651 aa17.63■□□□□ 0.41
CBWD1-220ENST00000612045 CCDC144AA2RUR9 1427 aa17.62■□□□□ 0.41
CBWD1-220ENST00000612045 GGT6Q6P531 493 aa17.61■□□□□ 0.41
CBWD1-220ENST00000612045 LMTK2Q8IWU2 1503 aa17.6■□□□□ 0.41
CBWD1-220ENST00000612045 EFCAB6Q5THR3 1501 aa17.58■□□□□ 0.41
CBWD1-220ENST00000612045 PTPRTO14522 1441 aa17.57■□□□□ 0.4
CBWD1-220ENST00000612045 TRHP20396 242 aaPredicted RBP17.57■□□□□ 0.4
CBWD1-220ENST00000612045 CEP152O94986 1710 aa17.57■□□□□ 0.4
CBWD1-220ENST00000612045 REREQ9P2R6 1566 aa17.57■□□□□ 0.4
CBWD1-220ENST00000612045 MSH5O43196 834 aa17.56■□□□□ 0.4
CBWD1-220ENST00000612045 TRPM2O94759 1503 aa17.56■□□□□ 0.4
CBWD1-220ENST00000612045 SPHKAPQ2M3C7 1700 aa17.55■□□□□ 0.4
CBWD1-220ENST00000612045 ABCC3O15438 1527 aa17.55■□□□□ 0.4
CBWD1-220ENST00000612045 WASHC2CQ9Y4E1 1318 aa17.55■□□□□ 0.4
CBWD1-220ENST00000612045 ARHGEF40Q8TER5 1519 aa17.54■□□□□ 0.4
CBWD1-220ENST00000612045 NBPF8Q3BBV2 869 aa17.54■□□□□ 0.4
CBWD1-220ENST00000612045 AGLP35573 1532 aa17.52■□□□□ 0.39
CBWD1-220ENST00000612045 DIEXFQ68CQ4 756 aaKnown RBP17.51■□□□□ 0.39
CBWD1-220ENST00000612045 NPATQ14207 1427 aa17.5■□□□□ 0.39
CBWD1-220ENST00000612045 ZC3H13Q5T200 1668 aaKnown RBP17.5■□□□□ 0.39
CBWD1-220ENST00000612045 CAMSAP1Q5T5Y3 1602 aa17.49■□□□□ 0.39
CBWD1-220ENST00000612045 UHRF1BP1Q6BDS2 1440 aa17.49■□□□□ 0.39
CBWD1-220ENST00000612045 DCAF11Q8TEB1 546 aa17.49■□□□□ 0.39
CBWD1-220ENST00000612045 CLTCL1P53675 1640 aa17.49■□□□□ 0.39
CBWD1-220ENST00000612045 RGL3Q3MIN7 710 aa17.48■□□□□ 0.39
CBWD1-220ENST00000612045 SPATA31E1Q6ZUB1 1445 aa17.48■□□□□ 0.39
CBWD1-220ENST00000612045 SIGLEC1Q9BZZ2 1709 aa17.47■□□□□ 0.39
CBWD1-220ENST00000612045 ARHGAP31Q2M1Z3 1444 aa17.46■□□□□ 0.39
CBWD1-220ENST00000612045 ZNF326Q5BKZ1 582 aaKnown RBP17.46■□□□□ 0.39
CBWD1-220ENST00000612045 KDM2AQ9Y2K7 1162 aa17.46■□□□□ 0.39
CBWD1-220ENST00000612045 PPP6R1Q9UPN7 881 aa17.45■□□□□ 0.38
CBWD1-220ENST00000612045 HIRIP3Q9BW71 556 aaPredicted RBP17.44■□□□□ 0.38
CBWD1-220ENST00000612045 UGGT1Q9NYU2 1555 aa17.44■□□□□ 0.38
CBWD1-220ENST00000612045 CNTLNQ9NXG0 1405 aa17.43■□□□□ 0.38
CBWD1-220ENST00000612045 CFAP65Q6ZU64 1925 aaKnown RBP17.43■□□□□ 0.38
CBWD1-220ENST00000612045 NEURL4Q96JN8 1562 aa17.42■□□□□ 0.38
CBWD1-220ENST00000612045 EIF4G2P78344 907 aaKnown RBP eCLIP17.42■□□□□ 0.38
CBWD1-220ENST00000612045 NOS1P29475 1434 aa17.42■□□□□ 0.38
CBWD1-220ENST00000612045 RALGAPBQ86X10 1494 aa17.41■□□□□ 0.38
CBWD1-220ENST00000612045 PRAG1Q86YV5 1406 aa17.41■□□□□ 0.38
CBWD1-220ENST00000612045 HSPA5P11021 654 aaKnown RBP17.4■□□□□ 0.38
CBWD1-220ENST00000612045 KIF1BO60333 1816 aa17.39■□□□□ 0.37
CBWD1-220ENST00000612045 MLECQ14165 292 aa17.39■□□□□ 0.37
CBWD1-220ENST00000612045 CLTCQ00610 1675 aaKnown RBP17.37■□□□□ 0.37
CBWD1-220ENST00000612045 SYNMO15061 1565 aa17.37■□□□□ 0.37
CBWD1-220ENST00000612045 STAC3Q96MF2 364 aa17.36■□□□□ 0.37
CBWD1-220ENST00000612045 ARID4BQ4LE39 1312 aaPredicted RBP17.36■□□□□ 0.37
CBWD1-220ENST00000612045 PREX1Q8TCU6 1659 aa17.35■□□□□ 0.37
CBWD1-220ENST00000612045 PIK3C2BO00750 1634 aa17.35■□□□□ 0.37
CBWD1-220ENST00000612045 TRPM1Q7Z4N2 1603 aa17.35■□□□□ 0.37
CBWD1-220ENST00000612045 ADGRB3O60242 1522 aa17.35■□□□□ 0.37
CBWD1-220ENST00000612045 MROH2AA6NES4 1674 aa17.34■□□□□ 0.37
CBWD1-220ENST00000612045 CARD11Q9BXL7 1154 aa17.33■□□□□ 0.37
CBWD1-220ENST00000612045 ROCK2O75116 1388 aaKnown RBP17.33■□□□□ 0.36
CBWD1-220ENST00000612045 SLC52A1Q9NWF4 448 aa17.33■□□□□ 0.36
CBWD1-220ENST00000612045 USP47Q96K76 1375 aa17.32■□□□□ 0.36
CBWD1-220ENST00000612045 ERVK-7P63135 1459 aa17.32■□□□□ 0.36
CBWD1-220ENST00000612045 MADDQ8WXG6 1647 aa17.32■□□□□ 0.36
CBWD1-220ENST00000612045 CHGAP10645 457 aaKnown RBP17.31■□□□□ 0.36
CBWD1-220ENST00000612045 FBXO31Q5XUX0 539 aaPredicted RBP17.31■□□□□ 0.36
CBWD1-220ENST00000612045 ESF1Q9H501 851 aaKnown RBP17.31■□□□□ 0.36
CBWD1-220ENST00000612045 GPRASP1Q5JY77 1395 aa17.3■□□□□ 0.36
CBWD1-220ENST00000612045 IDI1Q13907 227 aa17.3■□□□□ 0.36
CBWD1-220ENST00000612045 MYOM2P54296 1465 aa17.3■□□□□ 0.36
CBWD1-220ENST00000612045 IFT172Q9UG01 1749 aa17.29■□□□□ 0.36
CBWD1-220ENST00000612045 NBPF1Q3BBV0 1214 aa17.29■□□□□ 0.36
CBWD1-220ENST00000612045 ZMYM3Q14202 1370 aa17.28■□□□□ 0.36
CBWD1-220ENST00000612045 DDX10Q13206 875 aaKnown RBP17.28■□□□□ 0.36
CBWD1-220ENST00000612045 SPATA31D1Q6ZQQ2 1576 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms