RNA–Protein interactions for RNA: ENST00000612011.1

PVT1-221, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 169 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-221ENST00000612011 DHX29Q7Z478 1369 aaKnown RBP15.11■□□□□ 0.01
PVT1-221ENST00000612011 KDM5DQ9BY66 1539 aa15.1■□□□□ 0.01
PVT1-221ENST00000612011 ZC3H13Q5T200 1668 aaKnown RBP15.09■□□□□ 0.01
PVT1-221ENST00000612011 PRDM15P57071 1507 aaPredicted RBP15.09■□□□□ 0.01
PVT1-221ENST00000612011 CFAP65Q6ZU64 1925 aaKnown RBP15.07■□□□□ 0
PVT1-221ENST00000612011 AGLP35573 1532 aa15.07■□□□□ 0
PVT1-221ENST00000612011 TET3O43151 1660 aa15.07■□□□□ 0
PVT1-221ENST00000612011 HRCP23327 699 aa15.07■□□□□ 0
PVT1-221ENST00000612011 TRIM52Q96A61 297 aa15.05■□□□□ -0
PVT1-221ENST00000612011 ACIN1Q9UKV3 1341 aaKnown RBP15.05■□□□□ -0
PVT1-221ENST00000612011 FAM135AQ9P2D6 1515 aa15.05■□□□□ -0
PVT1-221ENST00000612011 VWDEQ8N2E2 1590 aa15.05■□□□□ -0
PVT1-221ENST00000612011 FER1L4A9Z1Z3 1794 aa15.04■□□□□ -0
PVT1-221ENST00000612011 E9PCH4 1651 aa15.04■□□□□ -0
PVT1-221ENST00000612011 CLTCQ00610 1675 aaKnown RBP15.04■□□□□ -0
PVT1-221ENST00000612011 CAMSAP1Q5T5Y3 1602 aa15.04■□□□□ -0
PVT1-221ENST00000612011 PZPP20742 1482 aa15.03■□□□□ -0
PVT1-221ENST00000612011 DHX57Q6P158 1386 aaKnown RBP15.02■□□□□ -0
PVT1-221ENST00000612011 KIF3BO15066 747 aa15.02■□□□□ -0
PVT1-221ENST00000612011 SPHKAPQ2M3C7 1700 aa15.01□□□□□ -0.01
PVT1-221ENST00000612011 NUP155O75694 1391 aa14.99□□□□□ -0.01
PVT1-221ENST00000612011 KANK1Q14678 1352 aa14.99□□□□□ -0.01
PVT1-221ENST00000612011 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.99□□□□□ -0.017e-9■■■□□ 16.6
PVT1-221ENST00000612011 MROH2AA6NES4 1674 aa14.99□□□□□ -0.01
PVT1-221ENST00000612011 ABCC3O15438 1527 aa14.98□□□□□ -0.01
PVT1-221ENST00000612011 EFCAB6Q5THR3 1501 aa14.97□□□□□ -0.01
PVT1-221ENST00000612011 LMTK2Q8IWU2 1503 aa14.97□□□□□ -0.01
PVT1-221ENST00000612011 CCER1Q8TC90 406 aaPredicted RBP14.96□□□□□ -0.01
PVT1-221ENST00000612011 GGT6Q6P531 493 aa14.95□□□□□ -0.02
PVT1-221ENST00000612011 PREX1Q8TCU6 1659 aa14.95□□□□□ -0.02
PVT1-221ENST00000612011 RIMS1Q86UR5 1692 aaKnown RBP14.94□□□□□ -0.02
PVT1-221ENST00000612011 MPHOSPH9Q99550 1183 aa14.94□□□□□ -0.02
PVT1-221ENST00000612011 SLC4A1APQ9BWU0 796 aaKnown RBP14.94□□□□□ -0.02
PVT1-221ENST00000612011 ARID4BQ4LE39 1312 aaPredicted RBP14.93□□□□□ -0.02
PVT1-221ENST00000612011 KIF1BO60333 1816 aa14.92□□□□□ -0.02
PVT1-221ENST00000612011 ADAMTSL3P82987 1691 aa14.92□□□□□ -0.02
PVT1-221ENST00000612011 MADDQ8WXG6 1647 aa14.92□□□□□ -0.02
PVT1-221ENST00000612011 C3P01024 1663 aa14.91□□□□□ -0.02
PVT1-221ENST00000612011 MLECQ14165 292 aa14.9□□□□□ -0.02
PVT1-221ENST00000612011 PKD2Q13563 968 aa14.89□□□□□ -0.03
PVT1-221ENST00000612011 MYO5BQ9ULV0 1848 aa14.89□□□□□ -0.03
PVT1-221ENST00000612011 WASHC2CQ9Y4E1 1318 aa14.88□□□□□ -0.03
PVT1-221ENST00000612011 RPRD2Q5VT52 1461 aaKnown RBP14.88□□□□□ -0.03
PVT1-221ENST00000612011 CLTCL1P53675 1640 aa14.87□□□□□ -0.03
PVT1-221ENST00000612011 CLSPNQ9HAW4 1339 aa14.87□□□□□ -0.03
PVT1-221ENST00000612011 TRPM2O94759 1503 aa14.87□□□□□ -0.03
PVT1-221ENST00000612011 FOXD1Q16676 465 aa14.86□□□□□ -0.03
PVT1-221ENST00000612011 PPP6R1Q9UPN7 881 aa14.86□□□□□ -0.03
PVT1-221ENST00000612011 CNTLNQ9NXG0 1405 aa14.85□□□□□ -0.03
PVT1-221ENST00000612011 SYNMO15061 1565 aa14.85□□□□□ -0.03
PVT1-221ENST00000612011 NPATQ14207 1427 aa14.84□□□□□ -0.03
PVT1-221ENST00000612011 ARHGAP31Q2M1Z3 1444 aa14.84□□□□□ -0.03
PVT1-221ENST00000612011 PIK3C2BO00750 1634 aa14.84□□□□□ -0.03
PVT1-221ENST00000612011 ANKRD30BQ9BXX2 1392 aa14.84□□□□□ -0.03
PVT1-221ENST00000612011 ESF1Q9H501 851 aaKnown RBP14.83□□□□□ -0.04
PVT1-221ENST00000612011 SPATA31D1Q6ZQQ2 1576 aa14.82□□□□□ -0.04
PVT1-221ENST00000612011 ERVK-7P63135 1459 aa14.81□□□□□ -0.04
PVT1-221ENST00000612011 UGGT1Q9NYU2 1555 aa14.81□□□□□ -0.04
PVT1-221ENST00000612011 PTPRTO14522 1441 aa14.8□□□□□ -0.04
PVT1-221ENST00000612011 PLA2R1Q13018 1463 aa14.8□□□□□ -0.04
PVT1-221ENST00000612011 IFT172Q9UG01 1749 aa14.79□□□□□ -0.04
PVT1-221ENST00000612011 CCDC144AA2RUR9 1427 aa14.78□□□□□ -0.04
PVT1-221ENST00000612011 NOS1P29475 1434 aa14.78□□□□□ -0.04
PVT1-221ENST00000612011 SIN3AQ96ST3 1273 aa14.78□□□□□ -0.04
PVT1-221ENST00000612011 PPLO60437 1756 aa14.77□□□□□ -0.05
PVT1-221ENST00000612011 MYO3AQ8NEV4 1616 aa14.77□□□□□ -0.05
PVT1-221ENST00000612011 ZMYM3Q14202 1370 aa14.76□□□□□ -0.05
PVT1-221ENST00000612011 NEUROD1Q13562 356 aa14.76□□□□□ -0.05
PVT1-221ENST00000612011 SETD1BQ9UPS6 1966 aaKnown RBP14.76□□□□□ -0.05
PVT1-221ENST00000612011 KDM5AP29375 1690 aaKnown RBP14.75□□□□□ -0.05
PVT1-221ENST00000612011 NEURL4Q96JN8 1562 aa14.74□□□□□ -0.05
PVT1-221ENST00000612011 UBR1Q8IWV7 1749 aa14.74□□□□□ -0.05
PVT1-221ENST00000612011 ZNF142P52746 1687 aaPredicted RBP14.74□□□□□ -0.05
PVT1-221ENST00000612011 TMEM131LA2VDJ0 1609 aa14.74□□□□□ -0.05
PVT1-221ENST00000612011 ADGRB3O60242 1522 aa14.73□□□□□ -0.05
PVT1-221ENST00000612011 TONSLQ96HA7 1378 aa14.73□□□□□ -0.05
PVT1-221ENST00000612011 ZEB1P37275 1124 aaPredicted RBP14.72□□□□□ -0.05
PVT1-221ENST00000612011 FBXO31Q5XUX0 539 aaPredicted RBP14.7□□□□□ -0.06
PVT1-221ENST00000612011 TNRQ92752 1358 aa14.7□□□□□ -0.06
PVT1-221ENST00000612011 PTPRMP28827 1452 aa14.69□□□□□ -0.06
PVT1-221ENST00000612011 CEBPAP49715 358 aaPredicted RBP14.68□□□□□ -0.06
PVT1-221ENST00000612011 PLPPR3Q6T4P5 718 aa14.68□□□□□ -0.06
PVT1-221ENST00000612011 SPATA31E1Q6ZUB1 1445 aa14.67□□□□□ -0.06
PVT1-221ENST00000612011 CEP170BQ9Y4F5 1589 aaPredicted RBP14.66□□□□□ -0.06
PVT1-221ENST00000612011 NLRP1Q9C000 1473 aa14.66□□□□□ -0.06
PVT1-221ENST00000612011 SLC52A1Q9NWF4 448 aa14.64□□□□□ -0.07
PVT1-221ENST00000612011 TIMELESSQ9UNS1 1208 aa14.64□□□□□ -0.07
PVT1-221ENST00000612011 NEXMIFQ5QGS0 1516 aa14.64□□□□□ -0.07
PVT1-221ENST00000612011 TRPM1Q7Z4N2 1603 aa14.63□□□□□ -0.07
PVT1-221ENST00000612011 CHGAP10645 457 aaKnown RBP14.63□□□□□ -0.07
PVT1-221ENST00000612011 POLR1AO95602 1720 aaPredicted RBP14.63□□□□□ -0.07
PVT1-221ENST00000612011 KIAA1210Q9ULL0 1709 aa14.63□□□□□ -0.07
PVT1-221ENST00000612011 IDI1Q13907 227 aa14.62□□□□□ -0.07
PVT1-221ENST00000612011 A2ML1A8K2U0 1454 aa14.62□□□□□ -0.07
PVT1-221ENST00000612011 RGL3Q3MIN7 710 aa14.61□□□□□ -0.07
PVT1-221ENST00000612011 L3MBTL2Q969R5 705 aa14.61□□□□□ -0.07
PVT1-221ENST00000612011 MYOM2P54296 1465 aa14.6□□□□□ -0.07
PVT1-221ENST00000612011 LAMC1P11047 1609 aa14.59□□□□□ -0.07
PVT1-221ENST00000612011 IQGAP1P46940 1657 aa14.59□□□□□ -0.07
PVT1-221ENST00000612011 KDM4FA0A1W2PPD8 638 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms