RNA–Protein interactions for RNA: ENST00000611795.1

SCFD2-204, Transcript of sec1 family domain containing 2, humanhuman

TSL 5 BASIC

Gene SCFD2, Length 1,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-204ENST00000611795 RNF17Q9BXT8 1623 aaKnown RBP28.37■■■□□ 2.13
SCFD2-204ENST00000611795 KIF3BO15066 747 aa28.36■■■□□ 2.13
SCFD2-204ENST00000611795 PRDM15P57071 1507 aaPredicted RBP28.3■■■□□ 2.12
SCFD2-204ENST00000611795 KDM5DQ9BY66 1539 aa28.29■■■□□ 2.12
SCFD2-204ENST00000611795 VWDEQ8N2E2 1590 aa28.28■■■□□ 2.12
SCFD2-204ENST00000611795 PZPP20742 1482 aa28.26■■■□□ 2.11
SCFD2-204ENST00000611795 TRIM52Q96A61 297 aa28.25■■■□□ 2.11
SCFD2-204ENST00000611795 IQGAP3Q86VI3 1631 aa28.24■■■□□ 2.11
SCFD2-204ENST00000611795 GGT6Q6P531 493 aa28.24■■■□□ 2.11
SCFD2-204ENST00000611795 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.24■■■□□ 2.11
SCFD2-204ENST00000611795 NUP155O75694 1391 aa28.24■■■□□ 2.11
SCFD2-204ENST00000611795 ARID4BQ4LE39 1312 aaPredicted RBP28.21■■■□□ 2.11
SCFD2-204ENST00000611795 FAM135AQ9P2D6 1515 aa28.21■■■□□ 2.11
SCFD2-204ENST00000611795 ACIN1Q9UKV3 1341 aaKnown RBP28.2■■■□□ 2.11
SCFD2-204ENST00000611795 MLECQ14165 292 aa28.18■■■□□ 2.1
SCFD2-204ENST00000611795 CEP152O94986 1710 aa28.18■■■□□ 2.1
SCFD2-204ENST00000611795 ABCC3O15438 1527 aa28.17■■■□□ 2.1
SCFD2-204ENST00000611795 DHX57Q6P158 1386 aaKnown RBP28.17■■■□□ 2.1
SCFD2-204ENST00000611795 LMTK2Q8IWU2 1503 aa28.16■■■□□ 2.1
SCFD2-204ENST00000611795 KANK1Q14678 1352 aa28.15■■■□□ 2.1
SCFD2-204ENST00000611795 MPHOSPH9Q99550 1183 aa28.14■■■□□ 2.09
SCFD2-204ENST00000611795 ZC3H13Q5T200 1668 aaKnown RBP28.13■■■□□ 2.09
SCFD2-204ENST00000611795 TET3O43151 1660 aa28.12■■■□□ 2.09
SCFD2-204ENST00000611795 SLC4A1APQ9BWU0 796 aaKnown RBP28.11■■■□□ 2.09
SCFD2-204ENST00000611795 PPP6R1Q9UPN7 881 aa28.11■■■□□ 2.09
SCFD2-204ENST00000611795 CLTCQ00610 1675 aaKnown RBP28.1■■■□□ 2.09
SCFD2-204ENST00000611795 WASHC2CQ9Y4E1 1318 aa28.09■■■□□ 2.09
SCFD2-204ENST00000611795 CAMSAP1Q5T5Y3 1602 aa28.09■■■□□ 2.09
SCFD2-204ENST00000611795 EFCAB6Q5THR3 1501 aa28.08■■■□□ 2.09
SCFD2-204ENST00000611795 ADAMTSL3P82987 1691 aa28.08■■■□□ 2.08
SCFD2-204ENST00000611795 E9PCH4 1651 aa28.07■■■□□ 2.08
SCFD2-204ENST00000611795 PKD2Q13563 968 aa28.05■■■□□ 2.08
SCFD2-204ENST00000611795 FER1L4A9Z1Z3 1794 aa28.05■■■□□ 2.08
SCFD2-204ENST00000611795 MADDQ8WXG6 1647 aa28.03■■■□□ 2.08
SCFD2-204ENST00000611795 FOXD1Q16676 465 aa28.03■■■□□ 2.08
SCFD2-204ENST00000611795 NPATQ14207 1427 aa28.01■■■□□ 2.07
SCFD2-204ENST00000611795 MROH2AA6NES4 1674 aa28■■■□□ 2.07
SCFD2-204ENST00000611795 ARHGAP31Q2M1Z3 1444 aa28■■■□□ 2.07
SCFD2-204ENST00000611795 CNTLNQ9NXG0 1405 aa28■■■□□ 2.07
SCFD2-204ENST00000611795 RIMS1Q86UR5 1692 aaKnown RBP27.96■■■□□ 2.07
SCFD2-204ENST00000611795 RPRD2Q5VT52 1461 aaKnown RBP27.96■■■□□ 2.07
SCFD2-204ENST00000611795 ZMYM3Q14202 1370 aa27.96■■■□□ 2.07
SCFD2-204ENST00000611795 PLA2R1Q13018 1463 aa27.95■■■□□ 2.06
SCFD2-204ENST00000611795 ESF1Q9H501 851 aaKnown RBP27.94■■■□□ 2.06
SCFD2-204ENST00000611795 CCER1Q8TC90 406 aaPredicted RBP27.93■■■□□ 2.06
SCFD2-204ENST00000611795 ANKRD30BQ9BXX2 1392 aa27.93■■■□□ 2.06
SCFD2-204ENST00000611795 C3P01024 1663 aa27.91■■■□□ 2.06
SCFD2-204ENST00000611795 PTPRTO14522 1441 aa27.91■■■□□ 2.06
SCFD2-204ENST00000611795 SPHKAPQ2M3C7 1700 aa27.9■■■□□ 2.06
SCFD2-204ENST00000611795 PREX1Q8TCU6 1659 aa27.9■■■□□ 2.06
SCFD2-204ENST00000611795 NOS1P29475 1434 aa27.9■■■□□ 2.06
SCFD2-204ENST00000611795 CFAP65Q6ZU64 1925 aaKnown RBP27.88■■■□□ 2.05
SCFD2-204ENST00000611795 ERVK-7P63135 1459 aa27.88■■■□□ 2.05
SCFD2-204ENST00000611795 FBXO31Q5XUX0 539 aaPredicted RBP27.88■■■□□ 2.05
SCFD2-204ENST00000611795 TRPM2O94759 1503 aa27.87■■■□□ 2.05
SCFD2-204ENST00000611795 SYNMO15061 1565 aa27.86■■■□□ 2.05
SCFD2-204ENST00000611795 SPATA31D1Q6ZQQ2 1576 aa27.86■■■□□ 2.05
SCFD2-204ENST00000611795 CEBPAP49715 358 aaPredicted RBP27.86■■■□□ 2.05
SCFD2-204ENST00000611795 KDM4FA0A1W2PPD8 638 aa27.85■■■□□ 2.05
SCFD2-204ENST00000611795 CLSPNQ9HAW4 1339 aa27.83■■■□□ 2.05
SCFD2-204ENST00000611795 UGGT1Q9NYU2 1555 aa27.82■■■□□ 2.04
SCFD2-204ENST00000611795 PTPRMP28827 1452 aa27.82■■■□□ 2.04
SCFD2-204ENST00000611795 SIN3AQ96ST3 1273 aa27.8■■■□□ 2.04
SCFD2-204ENST00000611795 CLTCL1P53675 1640 aa27.8■■■□□ 2.04
SCFD2-204ENST00000611795 PIK3C2BO00750 1634 aa27.78■■■□□ 2.04
SCFD2-204ENST00000611795 PLPPR3Q6T4P5 718 aa27.75■■■□□ 2.03
SCFD2-204ENST00000611795 CCDC144AA2RUR9 1427 aa27.75■■■□□ 2.03
SCFD2-204ENST00000611795 TNRQ92752 1358 aa27.74■■■□□ 2.03
SCFD2-204ENST00000611795 NEUROD1Q13562 356 aa27.69■■■□□ 2.02
SCFD2-204ENST00000611795 IDI1Q13907 227 aa27.68■■■□□ 2.02
SCFD2-204ENST00000611795 SLC52A1Q9NWF4 448 aa27.67■■■□□ 2.02
SCFD2-204ENST00000611795 SPATA31E1Q6ZUB1 1445 aa27.65■■■□□ 2.02
SCFD2-204ENST00000611795 MYO3AQ8NEV4 1616 aa27.65■■■□□ 2.02
SCFD2-204ENST00000611795 ADGRB3O60242 1522 aa27.64■■■□□ 2.01
SCFD2-204ENST00000611795 KIF1BO60333 1816 aa27.63■■■□□ 2.01
SCFD2-204ENST00000611795 TMEM131LA2VDJ0 1609 aa27.63■■■□□ 2.01
SCFD2-204ENST00000611795 NLRP1Q9C000 1473 aa27.62■■■□□ 2.01
SCFD2-204ENST00000611795 NEURL4Q96JN8 1562 aa27.61■■■□□ 2.01
SCFD2-204ENST00000611795 MYO5BQ9ULV0 1848 aa27.59■■■□□ 2.01
SCFD2-204ENST00000611795 UBR1Q8IWV7 1749 aa27.57■■■□□ 2
SCFD2-204ENST00000611795 A2ML1A8K2U0 1454 aa27.56■■■□□ 2
SCFD2-204ENST00000611795 SETD1BQ9UPS6 1966 aaKnown RBP27.56■■■□□ 2
SCFD2-204ENST00000611795 KDM5AP29375 1690 aaKnown RBP27.56■■■□□ 2
SCFD2-204ENST00000611795 ZNF142P52746 1687 aaPredicted RBP27.56■■■□□ 2
SCFD2-204ENST00000611795 CEP170BQ9Y4F5 1589 aaPredicted RBP27.54■■■□□ 2
SCFD2-204ENST00000611795 CHGAP10645 457 aaKnown RBP27.54■■■□□ 2
SCFD2-204ENST00000611795 RGL3Q3MIN7 710 aa27.53■■■□□ 2
SCFD2-204ENST00000611795 L3MBTL2Q969R5 705 aa27.52■■■□□ 2
SCFD2-204ENST00000611795 TONSLQ96HA7 1378 aa27.52■■■□□ 2
SCFD2-204ENST00000611795 IFT172Q9UG01 1749 aa27.49■■□□□ 1.99
SCFD2-204ENST00000611795 UHRF1BP1Q6BDS2 1440 aa27.48■■□□□ 1.99
SCFD2-204ENST00000611795 NEXMIFQ5QGS0 1516 aa27.47■■□□□ 1.99
SCFD2-204ENST00000611795 TIMELESSQ9UNS1 1208 aa27.47■■□□□ 1.99
SCFD2-204ENST00000611795 STAG3Q9UJ98 1225 aa27.46■■□□□ 1.99
SCFD2-204ENST00000611795 PPLO60437 1756 aa27.45■■□□□ 1.99
SCFD2-204ENST00000611795 ZNF326Q5BKZ1 582 aaKnown RBP27.44■■□□□ 1.98
SCFD2-204ENST00000611795 ZFYVE9O95405 1425 aa27.43■■□□□ 1.98
SCFD2-204ENST00000611795 RPGRIP1LQ68CZ1 1315 aa27.42■■□□□ 1.98
SCFD2-204ENST00000611795 ARHGAP23Q9P227 1491 aa27.42■■□□□ 1.98
SCFD2-204ENST00000611795 DCAF11Q8TEB1 546 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms