RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 ZFYVE16Q7Z3T8 1539 aa26.25■■□□□ 1.79
SEMA3B-210ENST00000611067 ERBINQ96RT1 1412 aa26.24■■□□□ 1.79
SEMA3B-210ENST00000611067 PKD2Q13563 968 aa26.23■■□□□ 1.79
SEMA3B-210ENST00000611067 IRX6P78412 446 aaPredicted RBP26.21■■□□□ 1.79
SEMA3B-210ENST00000611067 ERICH6Q7L0X2 663 aa26.21■■□□□ 1.79
SEMA3B-210ENST00000611067 UNC13BO14795 1591 aa26.21■■□□□ 1.79
SEMA3B-210ENST00000611067 ATP7AQ04656 1500 aa26.21■■□□□ 1.79
SEMA3B-210ENST00000611067 INO80Q9ULG1 1556 aaPredicted RBP26.21■■□□□ 1.79
SEMA3B-210ENST00000611067 RPRD2Q5VT52 1461 aaKnown RBP26.19■■□□□ 1.78
SEMA3B-210ENST00000611067 PPP4R2Q9NY27 417 aa26.18■■□□□ 1.78
SEMA3B-210ENST00000611067 WASHC2AQ641Q2 1341 aa26.18■■□□□ 1.78
SEMA3B-210ENST00000611067 FAM135AQ9P2D6 1515 aa26.18■■□□□ 1.78
SEMA3B-210ENST00000611067 MYT1LQ9UL68 1186 aa26.18■■□□□ 1.78
SEMA3B-210ENST00000611067 ZNF518AQ6AHZ1 1483 aa26.17■■□□□ 1.78
SEMA3B-210ENST00000611067 MAP3K4Q9Y6R4 1608 aa26.14■■□□□ 1.78
SEMA3B-210ENST00000611067 GLI2P10070 1586 aa26.14■■□□□ 1.78
SEMA3B-210ENST00000611067 NEO1Q92859 1461 aa26.14■■□□□ 1.78
SEMA3B-210ENST00000611067 HSPA5P11021 654 aaKnown RBP26.14■■□□□ 1.77
SEMA3B-210ENST00000611067 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.13■■□□□ 1.772e-7■■□□□ 14.1
SEMA3B-210ENST00000611067 MAGI2Q86UL8 1455 aa26.11■■□□□ 1.77
SEMA3B-210ENST00000611067 IQGAP3Q86VI3 1631 aa26.11■■□□□ 1.77
SEMA3B-210ENST00000611067 POGZQ7Z3K3 1410 aa26.11■■□□□ 1.77
SEMA3B-210ENST00000611067 CNTLNQ9NXG0 1405 aa26.11■■□□□ 1.77
SEMA3B-210ENST00000611067 KDM5CP41229 1560 aa26.07■■□□□ 1.76
SEMA3B-210ENST00000611067 DIP2BQ9P265 1576 aa26.07■■□□□ 1.76
SEMA3B-210ENST00000611067 EIF4G2P78344 907 aaKnown RBP eCLIP26.07■■□□□ 1.76
SEMA3B-210ENST00000611067 L3MBTL2Q969R5 705 aa26.07■■□□□ 1.76
SEMA3B-210ENST00000611067 KIDINS220Q9ULH0 1771 aa26.07■■□□□ 1.76
SEMA3B-210ENST00000611067 TEX14Q8IWB6 1497 aa26.05■■□□□ 1.76
SEMA3B-210ENST00000611067 FAM69CQ0P6D2 419 aa26.04■■□□□ 1.76
SEMA3B-210ENST00000611067 DHX29Q7Z478 1369 aaKnown RBP26.03■■□□□ 1.76
SEMA3B-210ENST00000611067 HECW2Q9P2P5 1572 aa26.02■■□□□ 1.76
SEMA3B-210ENST00000611067 EIF2AK4Q9P2K8 1649 aaKnown RBP26.02■■□□□ 1.76
SEMA3B-210ENST00000611067 CCDC184Q52MB2 194 aa26.02■■□□□ 1.76
SEMA3B-210ENST00000611067 MLH3Q9UHC1 1453 aa26.01■■□□□ 1.76
SEMA3B-210ENST00000611067 ZBED9Q6R2W3 1325 aa26.01■■□□□ 1.75
SEMA3B-210ENST00000611067 DEPDC5O75140 1603 aa26.01■■□□□ 1.75
SEMA3B-210ENST00000611067 PRKRIP1Q9H875 184 aaPredicted RBP26■■□□□ 1.75
SEMA3B-210ENST00000611067 KIF3BO15066 747 aa25.97■■□□□ 1.75
SEMA3B-210ENST00000611067 KANK1Q14678 1352 aa25.96■■□□□ 1.75
SEMA3B-210ENST00000611067 CCDC7Q96M83 1385 aa25.96■■□□□ 1.75
SEMA3B-210ENST00000611067 A2MP01023 1474 aa25.95■■□□□ 1.75
SEMA3B-210ENST00000611067 RAPGEF3O95398 923 aa25.95■■□□□ 1.74
SEMA3B-210ENST00000611067 CCDC144AA2RUR9 1427 aa25.94■■□□□ 1.74
SEMA3B-210ENST00000611067 B4GALNT3Q6L9W6 998 aa25.94■■□□□ 1.74
SEMA3B-210ENST00000611067 FAM9BQ8IZU0 186 aa25.93■■□□□ 1.74
SEMA3B-210ENST00000611067 RICTORQ6R327 1708 aa25.93■■□□□ 1.74
SEMA3B-210ENST00000611067 TSPOAP1O95153 1857 aa25.93■■□□□ 1.74
SEMA3B-210ENST00000611067 MRS2Q9HD23 443 aa25.92■■□□□ 1.74
SEMA3B-210ENST00000611067 PRDM15P57071 1507 aaPredicted RBP25.92■■□□□ 1.74
SEMA3B-210ENST00000611067 ABCA6Q8N139 1617 aa25.9■■□□□ 1.74
SEMA3B-210ENST00000611067 C11orf95C9JLR9 678 aaPredicted RBP25.9■■□□□ 1.74
SEMA3B-210ENST00000611067 VWDEQ8N2E2 1590 aa25.89■■□□□ 1.73
SEMA3B-210ENST00000611067 TET3O43151 1660 aa25.88■■□□□ 1.73
SEMA3B-210ENST00000611067 ATP10AO60312 1499 aa25.87■■□□□ 1.73
SEMA3B-210ENST00000611067 PLA2R1Q13018 1463 aa25.87■■□□□ 1.73
SEMA3B-210ENST00000611067 MROH1Q8NDA8 1641 aa25.87■■□□□ 1.73
SEMA3B-210ENST00000611067 E9PCH4 1651 aa25.87■■□□□ 1.73
SEMA3B-210ENST00000611067 PPRC1Q5VV67 1664 aaKnown RBP25.87■■□□□ 1.73
SEMA3B-210ENST00000611067 FRMPD1Q5SYB0 1578 aa25.86■■□□□ 1.73
SEMA3B-210ENST00000611067 NBPF8Q3BBV2 869 aa25.85■■□□□ 1.73
SEMA3B-210ENST00000611067 RNF17Q9BXT8 1623 aaKnown RBP25.85■■□□□ 1.73
SEMA3B-210ENST00000611067 POLR1AO95602 1720 aaPredicted RBP25.84■■□□□ 1.73
SEMA3B-210ENST00000611067 KIF13AQ9H1H9 1805 aa25.84■■□□□ 1.73
SEMA3B-210ENST00000611067 DEKP35659 375 aaKnown RBP25.84■■□□□ 1.73
SEMA3B-210ENST00000611067 DIP2CQ9Y2E4 1556 aa25.83■■□□□ 1.73
SEMA3B-210ENST00000611067 NOP58Q9Y2X3 529 aaKnown RBP25.83■■□□□ 1.72
SEMA3B-210ENST00000611067 BCORL1Q5H9F3 1711 aa25.81■■□□□ 1.72
SEMA3B-210ENST00000611067 ZNF326Q5BKZ1 582 aaKnown RBP25.8■■□□□ 1.72
SEMA3B-210ENST00000611067 SPHKAPQ2M3C7 1700 aa25.79■■□□□ 1.72
SEMA3B-210ENST00000611067 ZMYM4Q5VZL5 1548 aa25.79■■□□□ 1.72
SEMA3B-210ENST00000611067 SPATA31E1Q6ZUB1 1445 aa25.78■■□□□ 1.72
SEMA3B-210ENST00000611067 SMG6Q86US8 1419 aaKnown RBP25.78■■□□□ 1.72
SEMA3B-210ENST00000611067 TRPM2O94759 1503 aa25.78■■□□□ 1.72
SEMA3B-210ENST00000611067 UHRF1BP1Q6BDS2 1440 aa25.77■■□□□ 1.72
SEMA3B-210ENST00000611067 KIF7Q2M1P5 1343 aa25.77■■□□□ 1.72
SEMA3B-210ENST00000611067 DCAF11Q8TEB1 546 aa25.76■■□□□ 1.71
SEMA3B-210ENST00000611067 EFCAB6Q5THR3 1501 aa25.76■■□□□ 1.71
SEMA3B-210ENST00000611067 LMTK2Q8IWU2 1503 aa25.76■■□□□ 1.71
SEMA3B-210ENST00000611067 YEATS2Q9ULM3 1422 aa25.75■■□□□ 1.71
SEMA3B-210ENST00000611067 GGT6Q6P531 493 aa25.75■■□□□ 1.71
SEMA3B-210ENST00000611067 CEP152O94986 1710 aa25.75■■□□□ 1.71
SEMA3B-210ENST00000611067 PTPRTO14522 1441 aa25.74■■□□□ 1.71
SEMA3B-210ENST00000611067 KDM2AQ9Y2K7 1162 aa25.74■■□□□ 1.71
SEMA3B-210ENST00000611067 RGL3Q3MIN7 710 aa25.73■■□□□ 1.71
SEMA3B-210ENST00000611067 RNF123Q5XPI4 1314 aa25.72■■□□□ 1.71
SEMA3B-210ENST00000611067 RALGAPBQ86X10 1494 aa25.7■■□□□ 1.7
SEMA3B-210ENST00000611067 NUDCQ9Y266 331 aa25.69■■□□□ 1.7
SEMA3B-210ENST00000611067 PAK3O75914 559 aaPredicted RBP25.68■■□□□ 1.7
SEMA3B-210ENST00000611067 CLTCL1P53675 1640 aa25.68■■□□□ 1.7
SEMA3B-210ENST00000611067 WASHC2CQ9Y4E1 1318 aa25.67■■□□□ 1.7
SEMA3B-210ENST00000611067 ABCC3O15438 1527 aa25.65■■□□□ 1.7
SEMA3B-210ENST00000611067 PRAG1Q86YV5 1406 aa25.63■■□□□ 1.69
SEMA3B-210ENST00000611067 CCDC136Q96JN2 1154 aa25.63■■□□□ 1.69
SEMA3B-210ENST00000611067 ANP32AP39687 249 aaKnown RBP25.62■■□□□ 1.69
SEMA3B-210ENST00000611067 NBR1Q14596 966 aa25.62■■□□□ 1.69
SEMA3B-210ENST00000611067 IPO9Q96P70 1041 aaKnown RBP25.62■■□□□ 1.69
SEMA3B-210ENST00000611067 ZC3H13Q5T200 1668 aaKnown RBP25.61■■□□□ 1.69
SEMA3B-210ENST00000611067 CAMSAP1Q5T5Y3 1602 aa25.61■■□□□ 1.69
SEMA3B-210ENST00000611067 USP47Q96K76 1375 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms