RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 CHIC2Q9UKJ5 165 aa19.71■□□□□ 0.75
CD9-212ENST00000610354 ESF1Q9H501 851 aaKnown RBP19.69■□□□□ 0.74
CD9-212ENST00000610354 SETD1BQ9UPS6 1966 aaKnown RBP19.69■□□□□ 0.74
CD9-212ENST00000610354 ZMYM3Q14202 1370 aa19.68■□□□□ 0.74
CD9-212ENST00000610354 PTPRKQ15262 1439 aa19.68■□□□□ 0.74
CD9-212ENST00000610354 DUOX2Q9NRD8 1548 aa19.68■□□□□ 0.74
CD9-212ENST00000610354 RRP7BPQ9NSQ0 103 aa19.68■□□□□ 0.74
CD9-212ENST00000610354 KIF15Q9NS87 1388 aa19.67■□□□□ 0.74
CD9-212ENST00000610354 RNF17Q9BXT8 1623 aaKnown RBP19.67■□□□□ 0.74
CD9-212ENST00000610354 EIF2AK4Q9P2K8 1649 aaKnown RBP19.66■□□□□ 0.74
CD9-212ENST00000610354 NCOA1Q15788 1441 aa19.66■□□□□ 0.74
CD9-212ENST00000610354 ADGRL2O95490 1459 aa19.66■□□□□ 0.74
CD9-212ENST00000610354 MROH1Q8NDA8 1641 aa19.65■□□□□ 0.74
CD9-212ENST00000610354 PREX1Q8TCU6 1659 aa19.64■□□□□ 0.74
CD9-212ENST00000610354 HSPA2P54652 639 aa19.63■□□□□ 0.73
CD9-212ENST00000610354 ANKRD30AQ9BXX3 1397 aa19.63■□□□□ 0.73
CD9-212ENST00000610354 KDM5DQ9BY66 1539 aa19.61■□□□□ 0.73
CD9-212ENST00000610354 ERBINQ96RT1 1412 aa19.61■□□□□ 0.73
CD9-212ENST00000610354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.6■□□□□ 0.73
CD9-212ENST00000610354 FAM135AQ9P2D6 1515 aa19.6■□□□□ 0.73
CD9-212ENST00000610354 NPATQ14207 1427 aa19.59■□□□□ 0.73
CD9-212ENST00000610354 RRBP1Q9P2E9 1410 aaKnown RBP19.59■□□□□ 0.73
CD9-212ENST00000610354 WASHC2CQ9Y4E1 1318 aa19.58■□□□□ 0.73
CD9-212ENST00000610354 ABCC3O15438 1527 aa19.58■□□□□ 0.73
CD9-212ENST00000610354 DEPDC5O75140 1603 aa19.57■□□□□ 0.72
CD9-212ENST00000610354 CEP152O94986 1710 aa19.57■□□□□ 0.72
CD9-212ENST00000610354 FBXO31Q5XUX0 539 aaPredicted RBP19.56■□□□□ 0.72
CD9-212ENST00000610354 UHRF1BP1Q6BDS2 1440 aa19.56■□□□□ 0.72
CD9-212ENST00000610354 PRDM15P57071 1507 aaPredicted RBP19.55■□□□□ 0.72
CD9-212ENST00000610354 ITGAEP38570 1179 aa19.54■□□□□ 0.72
CD9-212ENST00000610354 ZC3H13Q5T200 1668 aaKnown RBP19.54■□□□□ 0.72
CD9-212ENST00000610354 PZPP20742 1482 aa19.54■□□□□ 0.72
CD9-212ENST00000610354 ROCK1Q13464 1354 aa19.52■□□□□ 0.72
CD9-212ENST00000610354 MYO3AQ8NEV4 1616 aa19.52■□□□□ 0.71
CD9-212ENST00000610354 ANKRD50Q9ULJ7 1429 aa19.51■□□□□ 0.71
CD9-212ENST00000610354 CAMSAP1Q5T5Y3 1602 aa19.51■□□□□ 0.71
CD9-212ENST00000610354 CFAP65Q6ZU64 1925 aaKnown RBP19.51■□□□□ 0.71
CD9-212ENST00000610354 VWDEQ8N2E2 1590 aa19.51■□□□□ 0.71
CD9-212ENST00000610354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.51■□□□□ 0.71
CD9-212ENST00000610354 STRCQ7RTU9 1775 aa19.5■□□□□ 0.71
CD9-212ENST00000610354 ZNF142P52746 1687 aaPredicted RBP19.48■□□□□ 0.71
CD9-212ENST00000610354 TNRQ92752 1358 aa19.47■□□□□ 0.71
CD9-212ENST00000610354 CEP170BQ9Y4F5 1589 aaPredicted RBP19.46■□□□□ 0.71
CD9-212ENST00000610354 LMTK2Q8IWU2 1503 aa19.45■□□□□ 0.7
CD9-212ENST00000610354 SPATA31D1Q6ZQQ2 1576 aa19.45■□□□□ 0.7
CD9-212ENST00000610354 ARHGAP31Q2M1Z3 1444 aa19.45■□□□□ 0.7
CD9-212ENST00000610354 ERVK-7P63135 1459 aa19.45■□□□□ 0.7
CD9-212ENST00000610354 A2ML1A8K2U0 1454 aa19.43■□□□□ 0.7
CD9-212ENST00000610354 UNC13BO14795 1591 aa19.43■□□□□ 0.7
CD9-212ENST00000610354 KANK1Q14678 1352 aa19.43■□□□□ 0.7
CD9-212ENST00000610354 EFCAB6Q5THR3 1501 aa19.38■□□□□ 0.69
CD9-212ENST00000610354 NLRP1Q9C000 1473 aa19.38■□□□□ 0.69
CD9-212ENST00000610354 NAIPQ13075 1403 aa19.38■□□□□ 0.69
CD9-212ENST00000610354 NCKAP5LQ9HCH0 1330 aa19.36■□□□□ 0.69
CD9-212ENST00000610354 TET3O43151 1660 aa19.36■□□□□ 0.69
CD9-212ENST00000610354 GCC2Q8IWJ2 1684 aa19.36■□□□□ 0.69
CD9-212ENST00000610354 IQGAP3Q86VI3 1631 aa19.35■□□□□ 0.69
CD9-212ENST00000610354 PLA2R1Q13018 1463 aa19.35■□□□□ 0.69
CD9-212ENST00000610354 SYNMO15061 1565 aa19.33■□□□□ 0.69
CD9-212ENST00000610354 PTPRTO14522 1441 aa19.33■□□□□ 0.68
CD9-212ENST00000610354 NOS1P29475 1434 aa19.33■□□□□ 0.68
CD9-212ENST00000610354 UGGT1Q9NYU2 1555 aa19.33■□□□□ 0.68
CD9-212ENST00000610354 E9PCH4 1651 aa19.32■□□□□ 0.68
CD9-212ENST00000610354 HFM1A2PYH4 1435 aa19.31■□□□□ 0.68
CD9-212ENST00000610354 UBR1Q8IWV7 1749 aa19.31■□□□□ 0.68
CD9-212ENST00000610354 NUP155O75694 1391 aa19.31■□□□□ 0.68
CD9-212ENST00000610354 DMRT2Q9Y5R5 561 aa19.29■□□□□ 0.68
CD9-212ENST00000610354 PIK3C2BO00750 1634 aa19.29■□□□□ 0.68
CD9-212ENST00000610354 THEMISQ8N1K5 641 aaPredicted RBP19.28■□□□□ 0.68
CD9-212ENST00000610354 RPRD2Q5VT52 1461 aaKnown RBP19.28■□□□□ 0.68
CD9-212ENST00000610354 NEURL4Q96JN8 1562 aa19.28■□□□□ 0.68
CD9-212ENST00000610354 POLR1AO95602 1720 aaPredicted RBP19.27■□□□□ 0.68
CD9-212ENST00000610354 PKD2Q13563 968 aa19.27■□□□□ 0.68
CD9-212ENST00000610354 IDI1Q13907 227 aa19.27■□□□□ 0.68
CD9-212ENST00000610354 ARHGAP23Q9P227 1491 aa19.22■□□□□ 0.67
CD9-212ENST00000610354 ANKLE2Q86XL3 938 aa19.22■□□□□ 0.67
CD9-212ENST00000610354 KDM5AP29375 1690 aaKnown RBP19.21■□□□□ 0.67
CD9-212ENST00000610354 MYO5BQ9ULV0 1848 aa19.21■□□□□ 0.67
CD9-212ENST00000610354 SLIT1O75093 1534 aa19.2■□□□□ 0.66
CD9-212ENST00000610354 LTBP4Q8N2S1 1624 aa19.2■□□□□ 0.66
CD9-212ENST00000610354 MED14O60244 1454 aa19.2■□□□□ 0.66
CD9-212ENST00000610354 LTKP29376 864 aa19.2■□□□□ 0.66
CD9-212ENST00000610354 SLC52A1Q9NWF4 448 aa19.2■□□□□ 0.66
CD9-212ENST00000610354 ADGRB3O60242 1522 aa19.19■□□□□ 0.66
CD9-212ENST00000610354 NPHP4O75161 1426 aaPredicted RBP19.17■□□□□ 0.66
CD9-212ENST00000610354 CERKQ8TCT0 537 aa19.17■□□□□ 0.66
CD9-212ENST00000610354 TRIM52Q96A61 297 aa19.17■□□□□ 0.66
CD9-212ENST00000610354 ZNF335Q9H4Z2 1342 aaPredicted RBP19.17■□□□□ 0.66
CD9-212ENST00000610354 TMEM2Q9UHN6 1383 aa19.17■□□□□ 0.66
CD9-212ENST00000610354 TMEM131LA2VDJ0 1609 aa19.16■□□□□ 0.66
CD9-212ENST00000610354 SPHKAPQ2M3C7 1700 aa19.16■□□□□ 0.66
CD9-212ENST00000610354 IQGAP1P46940 1657 aa19.15■□□□□ 0.66
CD9-212ENST00000610354 STAG3Q9UJ98 1225 aa19.15■□□□□ 0.66
CD9-212ENST00000610354 SCAF11Q99590 1463 aaKnown RBP19.15■□□□□ 0.66
CD9-212ENST00000610354 ILDR1Q86SU0 546 aaPredicted RBP19.14■□□□□ 0.65
CD9-212ENST00000610354 TXNDC2Q86VQ3 553 aa19.14■□□□□ 0.65
CD9-212ENST00000610354 SETD5Q9C0A6 1442 aa19.13■□□□□ 0.65
CD9-212ENST00000610354 SLC4A1APQ9BWU0 796 aaKnown RBP19.1■□□□□ 0.65
CD9-212ENST00000610354 ZFYVE9O95405 1425 aa19.1■□□□□ 0.65
CD9-212ENST00000610354 CLTCL1P53675 1640 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms