RNA–Protein interactions for RNA: ENST00000609606.5

CSNK2A1-209, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2

Gene CSNK2A1, Length 589 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-209ENST00000609606 KIF3BO15066 747 aa22.79■■□□□ 1.24
CSNK2A1-209ENST00000609606 PPP6R1Q9UPN7 881 aa22.79■■□□□ 1.24
CSNK2A1-209ENST00000609606 ITGAEP38570 1179 aa22.78■■□□□ 1.24
CSNK2A1-209ENST00000609606 FAM135AQ9P2D6 1515 aa22.77■■□□□ 1.24
CSNK2A1-209ENST00000609606 CNTLNQ9NXG0 1405 aa22.76■■□□□ 1.23
CSNK2A1-209ENST00000609606 PTPRMP28827 1452 aa22.76■■□□□ 1.23
CSNK2A1-209ENST00000609606 GGT6Q6P531 493 aa22.74■■□□□ 1.23
CSNK2A1-209ENST00000609606 MROH2AA6NES4 1674 aa22.73■■□□□ 1.23
CSNK2A1-209ENST00000609606 ANKRD50Q9ULJ7 1429 aa22.73■■□□□ 1.23
CSNK2A1-209ENST00000609606 DEPDC5O75140 1603 aa22.72■■□□□ 1.23
CSNK2A1-209ENST00000609606 MROH1Q8NDA8 1641 aa22.71■■□□□ 1.23
CSNK2A1-209ENST00000609606 ESF1Q9H501 851 aaKnown RBP22.71■■□□□ 1.23
CSNK2A1-209ENST00000609606 CLTCQ00610 1675 aaKnown RBP22.7■■□□□ 1.22
CSNK2A1-209ENST00000609606 PRDM15P57071 1507 aaPredicted RBP22.69■■□□□ 1.22
CSNK2A1-209ENST00000609606 KDM5DQ9BY66 1539 aa22.69■■□□□ 1.22
CSNK2A1-209ENST00000609606 ZC3H13Q5T200 1668 aaKnown RBP22.68■■□□□ 1.22
CSNK2A1-209ENST00000609606 C3P01024 1663 aa22.67■■□□□ 1.22
CSNK2A1-209ENST00000609606 GCC2Q8IWJ2 1684 aa22.67■■□□□ 1.22
CSNK2A1-209ENST00000609606 HFM1A2PYH4 1435 aa22.65■■□□□ 1.22
CSNK2A1-209ENST00000609606 NAIPQ13075 1403 aa22.64■■□□□ 1.21
CSNK2A1-209ENST00000609606 WASHC2CQ9Y4E1 1318 aa22.63■■□□□ 1.21
CSNK2A1-209ENST00000609606 ABCC3O15438 1527 aa22.63■■□□□ 1.21
CSNK2A1-209ENST00000609606 ZMYM3Q14202 1370 aa22.63■■□□□ 1.21
CSNK2A1-209ENST00000609606 SETD1BQ9UPS6 1966 aaKnown RBP22.62■■□□□ 1.21
CSNK2A1-209ENST00000609606 UNC13BO14795 1591 aa22.62■■□□□ 1.21
CSNK2A1-209ENST00000609606 VWDEQ8N2E2 1590 aa22.62■■□□□ 1.21
CSNK2A1-209ENST00000609606 CEP152O94986 1710 aa22.61■■□□□ 1.21
CSNK2A1-209ENST00000609606 KANK1Q14678 1352 aa22.61■■□□□ 1.21
CSNK2A1-209ENST00000609606 LMTK2Q8IWU2 1503 aa22.58■■□□□ 1.21
CSNK2A1-209ENST00000609606 CEBPAP49715 358 aaPredicted RBP22.58■■□□□ 1.21
CSNK2A1-209ENST00000609606 NPATQ14207 1427 aa22.57■■□□□ 1.2
CSNK2A1-209ENST00000609606 CAMSAP1Q5T5Y3 1602 aa22.57■■□□□ 1.2
CSNK2A1-209ENST00000609606 PZPP20742 1482 aa22.56■■□□□ 1.2
CSNK2A1-209ENST00000609606 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.56■■□□□ 1.2
CSNK2A1-209ENST00000609606 ARHGAP31Q2M1Z3 1444 aa22.53■■□□□ 1.2
CSNK2A1-209ENST00000609606 IQGAP3Q86VI3 1631 aa22.53■■□□□ 1.2
CSNK2A1-209ENST00000609606 TET3O43151 1660 aa22.51■■□□□ 1.19
CSNK2A1-209ENST00000609606 PREX1Q8TCU6 1659 aa22.51■■□□□ 1.19
CSNK2A1-209ENST00000609606 EFCAB6Q5THR3 1501 aa22.5■■□□□ 1.19
CSNK2A1-209ENST00000609606 NUP155O75694 1391 aa22.48■■□□□ 1.19
CSNK2A1-209ENST00000609606 SETD5Q9C0A6 1442 aa22.47■■□□□ 1.19
CSNK2A1-209ENST00000609606 CFAP65Q6ZU64 1925 aaKnown RBP22.47■■□□□ 1.19
CSNK2A1-209ENST00000609606 SPATA31D1Q6ZQQ2 1576 aa22.46■■□□□ 1.19
CSNK2A1-209ENST00000609606 ACIN1Q9UKV3 1341 aaKnown RBP22.46■■□□□ 1.19
CSNK2A1-209ENST00000609606 RPRD2Q5VT52 1461 aaKnown RBP22.46■■□□□ 1.19
CSNK2A1-209ENST00000609606 ERVK-7P63135 1459 aa22.45■■□□□ 1.18
CSNK2A1-209ENST00000609606 FBXO31Q5XUX0 539 aaPredicted RBP22.44■■□□□ 1.18
CSNK2A1-209ENST00000609606 UHRF1BP1Q6BDS2 1440 aa22.44■■□□□ 1.18
CSNK2A1-209ENST00000609606 LMTK3Q96Q04 1460 aa22.44■■□□□ 1.18
CSNK2A1-209ENST00000609606 MYO3AQ8NEV4 1616 aa22.42■■□□□ 1.18
CSNK2A1-209ENST00000609606 TNRQ92752 1358 aa22.42■■□□□ 1.18
CSNK2A1-209ENST00000609606 E9PCH4 1651 aa22.4■■□□□ 1.18
CSNK2A1-209ENST00000609606 ZNF142P52746 1687 aaPredicted RBP22.4■■□□□ 1.18
CSNK2A1-209ENST00000609606 NLRP1Q9C000 1473 aa22.38■■□□□ 1.17
CSNK2A1-209ENST00000609606 NOS1P29475 1434 aa22.38■■□□□ 1.17
CSNK2A1-209ENST00000609606 RAB3GAP2Q9H2M9 1393 aa22.38■■□□□ 1.17
CSNK2A1-209ENST00000609606 HRCP23327 699 aa22.37■■□□□ 1.17
CSNK2A1-209ENST00000609606 TRIM26Q12899 539 aaPredicted RBP22.37■■□□□ 1.17
CSNK2A1-209ENST00000609606 TRIM52Q96A61 297 aa22.37■■□□□ 1.17
CSNK2A1-209ENST00000609606 CEP170BQ9Y4F5 1589 aaPredicted RBP22.37■■□□□ 1.17
CSNK2A1-209ENST00000609606 A2ML1A8K2U0 1454 aa22.35■■□□□ 1.17
CSNK2A1-209ENST00000609606 SYNMO15061 1565 aa22.33■■□□□ 1.17
CSNK2A1-209ENST00000609606 SLC4A1APQ9BWU0 796 aaKnown RBP22.3■■□□□ 1.16
CSNK2A1-209ENST00000609606 SPHKAPQ2M3C7 1700 aa22.29■■□□□ 1.16
CSNK2A1-209ENST00000609606 KDM5AP29375 1690 aaKnown RBP22.28■■□□□ 1.16
CSNK2A1-209ENST00000609606 SLC52A1Q9NWF4 448 aa22.28■■□□□ 1.16
CSNK2A1-209ENST00000609606 PTPRTO14522 1441 aa22.28■■□□□ 1.16
CSNK2A1-209ENST00000609606 PIK3C2BO00750 1634 aa22.28■■□□□ 1.16
CSNK2A1-209ENST00000609606 HSPA2P54652 639 aa22.27■■□□□ 1.16
CSNK2A1-209ENST00000609606 UGGT1Q9NYU2 1555 aa22.27■■□□□ 1.16
CSNK2A1-209ENST00000609606 PKD2Q13563 968 aa22.26■■□□□ 1.15
CSNK2A1-209ENST00000609606 MPHOSPH9Q99550 1183 aa22.26■■□□□ 1.15
CSNK2A1-209ENST00000609606 UBR1Q8IWV7 1749 aa22.26■■□□□ 1.15
CSNK2A1-209ENST00000609606 PLA2R1Q13018 1463 aa22.24■■□□□ 1.15
CSNK2A1-209ENST00000609606 IDI1Q13907 227 aa22.24■■□□□ 1.15
CSNK2A1-209ENST00000609606 TRPM2O94759 1503 aa22.22■■□□□ 1.15
CSNK2A1-209ENST00000609606 THEMISQ8N1K5 641 aaPredicted RBP22.22■■□□□ 1.15
CSNK2A1-209ENST00000609606 STRCQ7RTU9 1775 aa22.21■■□□□ 1.15
CSNK2A1-209ENST00000609606 POTEDQ86YR6 584 aa22.2■■□□□ 1.14
CSNK2A1-209ENST00000609606 ADGRB3O60242 1522 aa22.2■■□□□ 1.14
CSNK2A1-209ENST00000609606 TMEM131LA2VDJ0 1609 aa22.17■■□□□ 1.14
CSNK2A1-209ENST00000609606 MYO5BQ9ULV0 1848 aa22.16■■□□□ 1.14
CSNK2A1-209ENST00000609606 CLTCL1P53675 1640 aa22.16■■□□□ 1.14
CSNK2A1-209ENST00000609606 SLIT1O75093 1534 aa22.16■■□□□ 1.14
CSNK2A1-209ENST00000609606 POLR1AO95602 1720 aaPredicted RBP22.15■■□□□ 1.14
CSNK2A1-209ENST00000609606 STAG3Q9UJ98 1225 aa22.15■■□□□ 1.14
CSNK2A1-209ENST00000609606 ARHGAP23Q9P227 1491 aa22.15■■□□□ 1.14
CSNK2A1-209ENST00000609606 KIF1BO60333 1816 aa22.13■■□□□ 1.13
CSNK2A1-209ENST00000609606 TMEM2Q9UHN6 1383 aa22.12■■□□□ 1.13
CSNK2A1-209ENST00000609606 DMRT2Q9Y5R5 561 aa22.11■■□□□ 1.13
CSNK2A1-209ENST00000609606 ANKLE2Q86XL3 938 aa22.1■■□□□ 1.13
CSNK2A1-209ENST00000609606 NEURL4Q96JN8 1562 aa22.08■■□□□ 1.13
CSNK2A1-209ENST00000609606 MED14O60244 1454 aa22.08■■□□□ 1.12
CSNK2A1-209ENST00000609606 SCAF11Q99590 1463 aaKnown RBP22.08■■□□□ 1.12
CSNK2A1-209ENST00000609606 NCKAP5LQ9HCH0 1330 aa22.07■■□□□ 1.12
CSNK2A1-209ENST00000609606 CCDC144AA2RUR9 1427 aa22.07■■□□□ 1.12
CSNK2A1-209ENST00000609606 ANKRD30BQ9BXX2 1392 aa22.06■■□□□ 1.12
CSNK2A1-209ENST00000609606 ZFYVE9O95405 1425 aa22.06■■□□□ 1.12
CSNK2A1-209ENST00000609606 CHGAP10645 457 aaKnown RBP22.05■■□□□ 1.12
CSNK2A1-209ENST00000609606 EID1Q9Y6B2 187 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms