RNA–Protein interactions for RNA: ENST00000609429.5

LINC00635-222, long intergenic non-protein coding RNA 635, human

TSL 5

Gene LINC00635, Length 743 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00635-222	ENST00000609429	RAPGEF3	O95398	923 aa		13.69	□□□□□ -0.22
LINC00635-222	ENST00000609429	TSPY4	P0CV99	314 aa		13.69	□□□□□ -0.22
LINC00635-222	ENST00000609429	TSPY10	P0CW01	314 aa		13.69	□□□□□ -0.22
LINC00635-222	ENST00000609429	FXR2	P51116	673 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
LINC00635-222	ENST00000609429	DAPK1	P53355	1430 aa		13.69	□□□□□ -0.22
LINC00635-222	ENST00000609429	ZNF644	Q9H582	1327 aa	Predicted RBP	13.68	□□□□□ -0.22
LINC00635-222	ENST00000609429	DIP2C	Q9Y2E4	1556 aa		13.68	□□□□□ -0.22
LINC00635-222	ENST00000609429	HAX1	O00165	279 aa		13.68	□□□□□ -0.22
LINC00635-222	ENST00000609429	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
LINC00635-222	ENST00000609429	C9orf84	Q5VXU9	1444 aa		13.67	□□□□□ -0.22
LINC00635-222	ENST00000609429	ABCA6	Q8N139	1617 aa		13.67	□□□□□ -0.22
LINC00635-222	ENST00000609429	FAM50A	Q14320	339 aa	Known RBP	13.66	□□□□□ -0.22
LINC00635-222	ENST00000609429	ATP10A	O60312	1499 aa		13.66	□□□□□ -0.22
LINC00635-222	ENST00000609429	ADGRL2	O95490	1459 aa		13.66	□□□□□ -0.22
LINC00635-222	ENST00000609429	ABCC5	O15440	1437 aa		13.65	□□□□□ -0.22
LINC00635-222	ENST00000609429	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.65	□□□□□ -0.22
LINC00635-222	ENST00000609429	AFAP1	Q8N556	730 aa		13.65	□□□□□ -0.22
LINC00635-222	ENST00000609429	ANKRD30A	Q9BXX3	1397 aa		13.63	□□□□□ -0.23
LINC00635-222	ENST00000609429	MYT1L	Q9UL68	1186 aa		13.63	□□□□□ -0.23
LINC00635-222	ENST00000609429	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.63	□□□□□ -0.23
LINC00635-222	ENST00000609429	AGL	P35573	1532 aa		13.63	□□□□□ -0.23
LINC00635-222	ENST00000609429	YEATS2	Q9ULM3	1422 aa		13.63	□□□□□ -0.23
LINC00635-222	ENST00000609429	BCORL1	Q5H9F3	1711 aa		13.62	□□□□□ -0.23
LINC00635-222	ENST00000609429	ROCK1	Q13464	1354 aa		13.62	□□□□□ -0.23
LINC00635-222	ENST00000609429	DUOX2	Q9NRD8	1548 aa		13.62	□□□□□ -0.23
LINC00635-222	ENST00000609429	A2M	P01023	1474 aa		13.61	□□□□□ -0.23
LINC00635-222	ENST00000609429	FOXD4L1	Q9NU39	408 aa		13.61	□□□□□ -0.23
LINC00635-222	ENST00000609429	FAM135A	Q9P2D6	1515 aa		13.6	□□□□□ -0.23
LINC00635-222	ENST00000609429	ERBIN	Q96RT1	1412 aa		13.6	□□□□□ -0.23
LINC00635-222	ENST00000609429	KIF15	Q9NS87	1388 aa		13.58	□□□□□ -0.23
LINC00635-222	ENST00000609429	DHX29	Q7Z478	1369 aa	Known RBP	13.58	□□□□□ -0.24
LINC00635-222	ENST00000609429	NCOA1	Q15788	1441 aa		13.57	□□□□□ -0.24
LINC00635-222	ENST00000609429	EVX2	Q03828	476 aa		13.57	□□□□□ -0.24
LINC00635-222	ENST00000609429	GCC2	Q8IWJ2	1684 aa		13.56	□□□□□ -0.24
LINC00635-222	ENST00000609429	RNF17	Q9BXT8	1623 aa	Known RBP	13.55	□□□□□ -0.24
LINC00635-222	ENST00000609429	ACIN1	Q9UKV3	1341 aa	Known RBP	13.55	□□□□□ -0.24
LINC00635-222	ENST00000609429	HFM1	A2PYH4	1435 aa		13.53	□□□□□ -0.24
LINC00635-222	ENST00000609429	DEPDC5	O75140	1603 aa		13.53	□□□□□ -0.24
LINC00635-222	ENST00000609429	ZC3H13	Q5T200	1668 aa	Known RBP	13.53	□□□□□ -0.24
LINC00635-222	ENST00000609429	PTPRK	Q15262	1439 aa		13.52	□□□□□ -0.25
LINC00635-222	ENST00000609429	SIGLEC1	Q9BZZ2	1709 aa		13.51	□□□□□ -0.25
LINC00635-222	ENST00000609429	ANKRD50	Q9ULJ7	1429 aa		13.51	□□□□□ -0.25
LINC00635-222	ENST00000609429	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.51	□□□□□ -0.25
LINC00635-222	ENST00000609429	ADAMTSL3	P82987	1691 aa		13.5	□□□□□ -0.25
LINC00635-222	ENST00000609429	PRDM15	P57071	1507 aa	Predicted RBP	13.5	□□□□□ -0.25
LINC00635-222	ENST00000609429	CNTLN	Q9NXG0	1405 aa		13.5	□□□□□ -0.25
LINC00635-222	ENST00000609429	CHIC2	Q9UKJ5	165 aa		13.5	□□□□□ -0.25
LINC00635-222	ENST00000609429	FER1L4	A9Z1Z3	1794 aa		13.5	□□□□□ -0.25
LINC00635-222	ENST00000609429	MROH2A	A6NES4	1674 aa		13.5	□□□□□ -0.25
LINC00635-222	ENST00000609429	ITGAE	P38570	1179 aa		13.49	□□□□□ -0.25
LINC00635-222	ENST00000609429	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.49	□□□□□ -0.25
LINC00635-222	ENST00000609429	UNC13B	O14795	1591 aa		13.49	□□□□□ -0.25
LINC00635-222	ENST00000609429	RRP7BP	Q9NSQ0	103 aa		13.48	□□□□□ -0.25
LINC00635-222	ENST00000609429	KDM5D	Q9BY66	1539 aa		13.48	□□□□□ -0.25
LINC00635-222	ENST00000609429	NAIP	Q13075	1403 aa		13.47	□□□□□ -0.25
LINC00635-222	ENST00000609429	KANK1	Q14678	1352 aa		13.47	□□□□□ -0.25
LINC00635-222	ENST00000609429	MADD	Q8WXG6	1647 aa		13.46	□□□□□ -0.26
LINC00635-222	ENST00000609429	KIF3B	O15066	747 aa		13.45	□□□□□ -0.26
LINC00635-222	ENST00000609429	TRIM26	Q12899	539 aa	Predicted RBP	13.45	□□□□□ -0.26
LINC00635-222	ENST00000609429	ESF1	Q9H501	851 aa	Known RBP	13.45	□□□□□ -0.26
LINC00635-222	ENST00000609429	MROH1	Q8NDA8	1641 aa		13.45	□□□□□ -0.26
LINC00635-222	ENST00000609429	LMTK2	Q8IWU2	1503 aa		13.44	□□□□□ -0.26
LINC00635-222	ENST00000609429	VWDE	Q8N2E2	1590 aa		13.43	□□□□□ -0.26
LINC00635-222	ENST00000609429	RIMS1	Q86UR5	1692 aa	Known RBP	13.43	□□□□□ -0.26
LINC00635-222	ENST00000609429	IQGAP3	Q86VI3	1631 aa		13.42	□□□□□ -0.26
LINC00635-222	ENST00000609429	CLTC	Q00610	1675 aa	Known RBP	13.41	□□□□□ -0.26
LINC00635-222	ENST00000609429	SETD5	Q9C0A6	1442 aa		13.41	□□□□□ -0.26
LINC00635-222	ENST00000609429	ABCC3	O15438	1527 aa		13.41	□□□□□ -0.26
LINC00635-222	ENST00000609429	CAMSAP1	Q5T5Y3	1602 aa		13.4	□□□□□ -0.26
LINC00635-222	ENST00000609429	GGT6	Q6P531	493 aa		13.4	□□□□□ -0.26
LINC00635-222	ENST00000609429	TET3	O43151	1660 aa		13.4	□□□□□ -0.26
LINC00635-222	ENST00000609429	CEP152	O94986	1710 aa		13.39	□□□□□ -0.27
LINC00635-222	ENST00000609429	EFCAB6	Q5THR3	1501 aa		13.39	□□□□□ -0.27
LINC00635-222	ENST00000609429	RPRD2	Q5VT52	1461 aa	Known RBP	13.38	□□□□□ -0.27
LINC00635-222	ENST00000609429	HRC	P23327	699 aa		13.38	□□□□□ -0.27
LINC00635-222	ENST00000609429	MLEC	Q14165	292 aa		13.38	□□□□□ -0.27
LINC00635-222	ENST00000609429	ARHGAP31	Q2M1Z3	1444 aa		13.38	□□□□□ -0.27
LINC00635-222	ENST00000609429	WASHC2C	Q9Y4E1	1318 aa		13.38	□□□□□ -0.27
LINC00635-222	ENST00000609429	PTPRM	P28827	1452 aa		13.37	□□□□□ -0.27
LINC00635-222	ENST00000609429	C3	P01024	1663 aa		13.37	□□□□□ -0.27
LINC00635-222	ENST00000609429	PZP	P20742	1482 aa		13.36	□□□□□ -0.27
LINC00635-222	ENST00000609429	NPAT	Q14207	1427 aa		13.36	□□□□□ -0.27
LINC00635-222	ENST00000609429	NUP155	O75694	1391 aa		13.34	□□□□□ -0.27
LINC00635-222	ENST00000609429	RAB3GAP2	Q9H2M9	1393 aa		13.34	□□□□□ -0.27
LINC00635-222	ENST00000609429	KDM4F	A0A1W2PPD8	638 aa		13.33	□□□□□ -0.28
LINC00635-222	ENST00000609429	SPDYE2B	A6NHP3	402 aa		13.33	□□□□□ -0.28
LINC00635-222	ENST00000609429	ZBTB22	O15209	634 aa		13.33	□□□□□ -0.28
LINC00635-222	ENST00000609429	SPDYE6	P0CI01	402 aa		13.33	□□□□□ -0.28
LINC00635-222	ENST00000609429	SPDYE2	Q495Y8	402 aa		13.33	□□□□□ -0.28
LINC00635-222	ENST00000609429	ZMYM3	Q14202	1370 aa		13.32	□□□□□ -0.28
LINC00635-222	ENST00000609429	SPATA31D1	Q6ZQQ2	1576 aa		13.32	□□□□□ -0.28
LINC00635-222	ENST00000609429	PREX1	Q8TCU6	1659 aa		13.31	□□□□□ -0.28
LINC00635-222	ENST00000609429	PRKAR2A	P13861	404 aa	Known RBP	13.3	□□□□□ -0.28
LINC00635-222	ENST00000609429	ERVK-7	P63135	1459 aa		13.29	□□□□□ -0.28
LINC00635-222	ENST00000609429	SETD1B	Q9UPS6	1966 aa	Known RBP	13.29	□□□□□ -0.28
LINC00635-222	ENST00000609429		E9PCH4	1651 aa		13.29	□□□□□ -0.28
LINC00635-222	ENST00000609429	ZNF142	P52746	1687 aa	Predicted RBP	13.28	□□□□□ -0.28
LINC00635-222	ENST00000609429	TRIM52	Q96A61	297 aa		13.28	□□□□□ -0.28
LINC00635-222	ENST00000609429	NLRP1	Q9C000	1473 aa		13.28	□□□□□ -0.28
LINC00635-222	ENST00000609429	MYO3A	Q8NEV4	1616 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms