RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 ZHX1Q9UKY1 873 aaPredicted RBP16.34■□□□□ 0.21
CTCFL-218ENST00000608440 ARID3AQ99856 593 aa16.34■□□□□ 0.21
CTCFL-218ENST00000608440 FGD6Q6ZV73 1430 aa16.33■□□□□ 0.2
CTCFL-218ENST00000608440 SLKQ9H2G2 1235 aaPredicted RBP16.32■□□□□ 0.2
CTCFL-218ENST00000608440 TPM2P07951 284 aa16.32■□□□□ 0.2
CTCFL-218ENST00000608440 EIF4G2P78344 907 aaKnown RBP eCLIP16.32■□□□□ 0.2
CTCFL-218ENST00000608440 MYOM3Q5VTT5 1437 aa16.31■□□□□ 0.2
CTCFL-218ENST00000608440 CHMP4BQ9H444 224 aaKnown RBP16.31■□□□□ 0.2
CTCFL-218ENST00000608440 ERBB4Q15303 1308 aa16.31■□□□□ 0.2
CTCFL-218ENST00000608440 ESPNB1AK53 854 aa16.31■□□□□ 0.2
CTCFL-218ENST00000608440 ARHGEF11O15085 1522 aa16.3■□□□□ 0.2
CTCFL-218ENST00000608440 NAP1L2Q9ULW6 460 aaPredicted RBP16.29■□□□□ 0.2
CTCFL-218ENST00000608440 PLIN1O60240 522 aa16.29■□□□□ 0.2
CTCFL-218ENST00000608440 RCAN3Q9UKA8 241 aa16.28■□□□□ 0.2
CTCFL-218ENST00000608440 ATP10BO94823 1461 aa16.28■□□□□ 0.2
CTCFL-218ENST00000608440 GTF2E1P29083 439 aaPredicted RBP16.27■□□□□ 0.19
CTCFL-218ENST00000608440 KIAA1211Q6ZU35 1233 aa16.27■□□□□ 0.19
CTCFL-218ENST00000608440 PRDM10Q9NQV6 1147 aa16.27■□□□□ 0.19
CTCFL-218ENST00000608440 TROQ12816 1431 aaPredicted RBP16.27■□□□□ 0.19
CTCFL-218ENST00000608440 UACAQ9BZF9 1416 aa16.27■□□□□ 0.19
CTCFL-218ENST00000608440 FAM161AQ3B820 660 aa16.25■□□□□ 0.19
CTCFL-218ENST00000608440 FAM13BQ9NYF5 915 aa16.25■□□□□ 0.19
CTCFL-218ENST00000608440 C8orf34Q49A92 452 aa16.25■□□□□ 0.19
CTCFL-218ENST00000608440 OSCARQ8IYS5 282 aa16.25■□□□□ 0.19
CTCFL-218ENST00000608440 CCDC7Q96M83 1385 aa16.24■□□□□ 0.19
CTCFL-218ENST00000608440 MYH16Q9H6N6 1097 aa16.23■□□□□ 0.19
CTCFL-218ENST00000608440 KIF14Q15058 1648 aa16.23■□□□□ 0.19
CTCFL-218ENST00000608440 FSD2A1L4K1 749 aa16.22■□□□□ 0.19
CTCFL-218ENST00000608440 POLR3GLQ9BT43 218 aa16.22■□□□□ 0.19
CTCFL-218ENST00000608440 PTPN23Q9H3S7 1636 aa16.22■□□□□ 0.19
CTCFL-218ENST00000608440 TRIM44Q96DX7 344 aaPredicted RBP16.22■□□□□ 0.19
CTCFL-218ENST00000608440 PLEKHD1A6NEE1 506 aa16.21■□□□□ 0.19
CTCFL-218ENST00000608440 CANXP27824 592 aaKnown RBP16.21■□□□□ 0.19
CTCFL-218ENST00000608440 CRBNQ96SW2 442 aa16.21■□□□□ 0.19
CTCFL-218ENST00000608440 ABCC2Q92887 1545 aa16.21■□□□□ 0.19
CTCFL-218ENST00000608440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.21■□□□□ 0.19
CTCFL-218ENST00000608440 STAC3Q96MF2 364 aa16.21■□□□□ 0.19
CTCFL-218ENST00000608440 TAF7LQ5H9L4 462 aa16.19■□□□□ 0.18
CTCFL-218ENST00000608440 PAXIP1Q6ZW49 1069 aaPredicted RBP16.19■□□□□ 0.18
CTCFL-218ENST00000608440 RIPK4P57078 832 aa16.18■□□□□ 0.18
CTCFL-218ENST00000608440 PTPRKQ15262 1439 aa16.17■□□□□ 0.18
CTCFL-218ENST00000608440 TMC1Q8TDI8 760 aa16.17■□□□□ 0.18
CTCFL-218ENST00000608440 MIA2Q96PC5 1412 aa16.17■□□□□ 0.18
CTCFL-218ENST00000608440 TCOF1Q13428 1488 aaKnown RBP16.16■□□□□ 0.18
CTCFL-218ENST00000608440 ADCY10Q96PN6 1610 aa16.16■□□□□ 0.18
CTCFL-218ENST00000608440 MRE11P49959 708 aa16.16■□□□□ 0.18
CTCFL-218ENST00000608440 SMAP1Q8IYB5 467 aaPredicted RBP16.16■□□□□ 0.18
CTCFL-218ENST00000608440 PNISRQ8TF01 805 aaKnown RBP16.15■□□□□ 0.18
CTCFL-218ENST00000608440 ZNF644Q9H582 1327 aaPredicted RBP16.15■□□□□ 0.18
CTCFL-218ENST00000608440 KIF7Q2M1P5 1343 aa16.15■□□□□ 0.18
CTCFL-218ENST00000608440 NCOA1Q15788 1441 aa16.14■□□□□ 0.17
CTCFL-218ENST00000608440 SPRYD3Q8NCJ5 442 aa16.14■□□□□ 0.17
CTCFL-218ENST00000608440 GRPEL1Q9HAV7 217 aa16.14■□□□□ 0.17
CTCFL-218ENST00000608440 GPATCH8Q9UKJ3 1502 aaKnown RBP16.13■□□□□ 0.17
CTCFL-218ENST00000608440 CFDP1Q9UEE9 299 aaPredicted RBP16.13■□□□□ 0.17
CTCFL-218ENST00000608440 KTN1Q86UP2 1357 aaKnown RBP16.13■□□□□ 0.17
CTCFL-218ENST00000608440 ZNF777Q9ULD5 760 aaPredicted RBP16.12■□□□□ 0.17
CTCFL-218ENST00000608440 UHRF1BP1LA0JNW5 1464 aa16.12■□□□□ 0.17
CTCFL-218ENST00000608440 ABCC10Q5T3U5 1492 aa16.11■□□□□ 0.17
CTCFL-218ENST00000608440 KDM5BQ9UGL1 1544 aa16.11■□□□□ 0.17
CTCFL-218ENST00000608440 PLCD3Q8N3E9 789 aa16.11■□□□□ 0.17
CTCFL-218ENST00000608440 CHIC2Q9UKJ5 165 aa16.11■□□□□ 0.17
CTCFL-218ENST00000608440 VGLL3A8MV65 326 aa16.1■□□□□ 0.17
CTCFL-218ENST00000608440 BECN1Q14457 450 aa16.1■□□□□ 0.17
CTCFL-218ENST00000608440 C20orf194Q5TEA3 1177 aa16.1■□□□□ 0.17
CTCFL-218ENST00000608440 CDCA7LQ96GN5 454 aa16.1■□□□□ 0.17
CTCFL-218ENST00000608440 ITSN2Q9NZM3 1697 aa16.1■□□□□ 0.17
CTCFL-218ENST00000608440 ZCCHC11Q5TAX3 1644 aaKnown RBP16.1■□□□□ 0.17
CTCFL-218ENST00000608440 FOXD1Q16676 465 aa16.1■□□□□ 0.17
CTCFL-218ENST00000608440 CAMSAP2Q08AD1 1489 aa16.09■□□□□ 0.17
CTCFL-218ENST00000608440 TRAK2O60296 914 aa16.09■□□□□ 0.17
CTCFL-218ENST00000608440 MAP7D2Q96T17 732 aa16.09■□□□□ 0.17
CTCFL-218ENST00000608440 R3HCC1Q9Y3T6 440 aaKnown RBP16.09■□□□□ 0.17
CTCFL-218ENST00000608440 MCM4P33991 863 aa16.08■□□□□ 0.16
CTCFL-218ENST00000608440 KDM2BQ8NHM5 1336 aa16.07■□□□□ 0.16
CTCFL-218ENST00000608440 AMER1Q5JTC6 1135 aaPredicted RBP16.07■□□□□ 0.16
CTCFL-218ENST00000608440 ANTXR1Q9H6X2 564 aa16.07■□□□□ 0.16
CTCFL-218ENST00000608440 IPO4Q8TEX9 1081 aaKnown RBP16.07■□□□□ 0.16
CTCFL-218ENST00000608440 HFM1A2PYH4 1435 aa16.06■□□□□ 0.16
CTCFL-218ENST00000608440 CENPQQ7L2Z9 268 aaPredicted RBP16.06■□□□□ 0.16
CTCFL-218ENST00000608440 RRP7BPQ9NSQ0 103 aa16.06■□□□□ 0.16
CTCFL-218ENST00000608440 CDC42BPAQ5VT25 1732 aa16.06■□□□□ 0.16
CTCFL-218ENST00000608440 DAPK1P53355 1430 aa16.05■□□□□ 0.16
CTCFL-218ENST00000608440 SEC24BO95487 1268 aa16.05■□□□□ 0.16
CTCFL-218ENST00000608440 PPP4R3BQ5MIZ7 849 aa16.05■□□□□ 0.16
CTCFL-218ENST00000608440 ANP32BQ92688 251 aaKnown RBP16.05■□□□□ 0.16
CTCFL-218ENST00000608440 TTC37Q6PGP7 1564 aa16.05■□□□□ 0.16
CTCFL-218ENST00000608440 USP19O94966 1318 aa16.05■□□□□ 0.16
CTCFL-218ENST00000608440 DMTNQ08495 405 aa16.04■□□□□ 0.16
CTCFL-218ENST00000608440 ABCC5O15440 1437 aa16.04■□□□□ 0.16
CTCFL-218ENST00000608440 NAIPQ13075 1403 aa16.04■□□□□ 0.16
CTCFL-218ENST00000608440 OFD1O75665 1012 aa16.03■□□□□ 0.16
CTCFL-218ENST00000608440 L3MBTL2Q969R5 705 aa16.03■□□□□ 0.16
CTCFL-218ENST00000608440 DNMT1P26358 1616 aaKnown RBP16.03■□□□□ 0.16
CTCFL-218ENST00000608440 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.03■□□□□ 0.16
CTCFL-218ENST00000608440 NCLP19338 710 aaKnown RBP16.02■□□□□ 0.16
CTCFL-218ENST00000608440 TMEM51Q9NW97 253 aa16.02■□□□□ 0.16
CTCFL-218ENST00000608440 DHX29Q7Z478 1369 aaKnown RBP16.02■□□□□ 0.15
CTCFL-218ENST00000608440 ZNF830Q96NB3 372 aaPredicted RBP16.01■□□□□ 0.15
CTCFL-218ENST00000608440 UQCRHLA0A096LP55 91 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms