RNA–Protein interactions for RNA: ENST00000608107.1

ITGB5-211, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-211ENST00000608107 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.05
ITGB5-211ENST00000608107 MROH1Q8NDA8 1641 aa15.34■□□□□ 0.05
ITGB5-211ENST00000608107 RNF17Q9BXT8 1623 aaKnown RBP15.33■□□□□ 0.04
ITGB5-211ENST00000608107 DEPDC5O75140 1603 aa15.32■□□□□ 0.04
ITGB5-211ENST00000608107 UNC13BO14795 1591 aa15.32■□□□□ 0.04
ITGB5-211ENST00000608107 CEP152O94986 1710 aa15.3■□□□□ 0.04
ITGB5-211ENST00000608107 TRIM52Q96A61 297 aa15.3■□□□□ 0.04
ITGB5-211ENST00000608107 PRDM15P57071 1507 aaPredicted RBP15.28■□□□□ 0.04
ITGB5-211ENST00000608107 CFAP65Q6ZU64 1925 aaKnown RBP15.27■□□□□ 0.04
ITGB5-211ENST00000608107 NUP155O75694 1391 aa15.27■□□□□ 0.04
ITGB5-211ENST00000608107 VWDEQ8N2E2 1590 aa15.27■□□□□ 0.03
ITGB5-211ENST00000608107 CLTCQ00610 1675 aaKnown RBP15.26■□□□□ 0.03
ITGB5-211ENST00000608107 IQGAP3Q86VI3 1631 aa15.26■□□□□ 0.03
ITGB5-211ENST00000608107 HRCP23327 699 aa15.26■□□□□ 0.03
ITGB5-211ENST00000608107 FER1L4A9Z1Z3 1794 aa15.26■□□□□ 0.03
ITGB5-211ENST00000608107 PZPP20742 1482 aa15.26■□□□□ 0.03
ITGB5-211ENST00000608107 KDM5DQ9BY66 1539 aa15.25■□□□□ 0.03
ITGB5-211ENST00000608107 ADAMTSL3P82987 1691 aa15.25■□□□□ 0.03
ITGB5-211ENST00000608107 ABCC3O15438 1527 aa15.24■□□□□ 0.03
ITGB5-211ENST00000608107 MADDQ8WXG6 1647 aa15.24■□□□□ 0.03
ITGB5-211ENST00000608107 FAM135AQ9P2D6 1515 aa15.23■□□□□ 0.03
ITGB5-211ENST00000608107 WASHC2CQ9Y4E1 1318 aa15.23■□□□□ 0.03
ITGB5-211ENST00000608107 KANK1Q14678 1352 aa15.23■□□□□ 0.03
ITGB5-211ENST00000608107 RIMS1Q86UR5 1692 aaKnown RBP15.22■□□□□ 0.03
ITGB5-211ENST00000608107 CAMSAP1Q5T5Y3 1602 aa15.21■□□□□ 0.03
ITGB5-211ENST00000608107 MPHOSPH9Q99550 1183 aa15.21■□□□□ 0.03
ITGB5-211ENST00000608107 SLC4A1APQ9BWU0 796 aaKnown RBP15.21■□□□□ 0.03
ITGB5-211ENST00000608107 TET3O43151 1660 aa15.21■□□□□ 0.03
ITGB5-211ENST00000608107 ZC3H13Q5T200 1668 aaKnown RBP15.21■□□□□ 0.03
ITGB5-211ENST00000608107 E9PCH4 1651 aa15.2■□□□□ 0.02
ITGB5-211ENST00000608107 PPP6R1Q9UPN7 881 aa15.2■□□□□ 0.02
ITGB5-211ENST00000608107 LMTK2Q8IWU2 1503 aa15.19■□□□□ 0.02
ITGB5-211ENST00000608107 KDM4FA0A1W2PPD8 638 aa15.19■□□□□ 0.02
ITGB5-211ENST00000608107 FOXD1Q16676 465 aa15.19■□□□□ 0.02
ITGB5-211ENST00000608107 PKD2Q13563 968 aa15.18■□□□□ 0.02
ITGB5-211ENST00000608107 ESF1Q9H501 851 aaKnown RBP15.18■□□□□ 0.02
ITGB5-211ENST00000608107 MROH2AA6NES4 1674 aa15.18■□□□□ 0.02
ITGB5-211ENST00000608107 C3P01024 1663 aa15.17■□□□□ 0.02
ITGB5-211ENST00000608107 DHX57Q6P158 1386 aaKnown RBP15.17■□□□□ 0.02
ITGB5-211ENST00000608107 CEBPAP49715 358 aaPredicted RBP15.17■□□□□ 0.02
ITGB5-211ENST00000608107 PLPPR3Q6T4P5 718 aa15.17■□□□□ 0.02
ITGB5-211ENST00000608107 EFCAB6Q5THR3 1501 aa15.17■□□□□ 0.02
ITGB5-211ENST00000608107 ZMYM3Q14202 1370 aa15.16■□□□□ 0.02
ITGB5-211ENST00000608107 NPATQ14207 1427 aa15.16■□□□□ 0.02
ITGB5-211ENST00000608107 ACIN1Q9UKV3 1341 aaKnown RBP15.16■□□□□ 0.02
ITGB5-211ENST00000608107 CNTLNQ9NXG0 1405 aa15.15■□□□□ 0.02
ITGB5-211ENST00000608107 FBXO31Q5XUX0 539 aaPredicted RBP15.14■□□□□ 0.01
ITGB5-211ENST00000608107 PREX1Q8TCU6 1659 aa15.12■□□□□ 0.01
ITGB5-211ENST00000608107 ARHGAP31Q2M1Z3 1444 aa15.12■□□□□ 0.01
ITGB5-211ENST00000608107 SPHKAPQ2M3C7 1700 aa15.12■□□□□ 0.01
ITGB5-211ENST00000608107 PTPRMP28827 1452 aa15.11■□□□□ 0.01
ITGB5-211ENST00000608107 ERVK-7P63135 1459 aa15.09■□□□□ 0.01
ITGB5-211ENST00000608107 PLA2R1Q13018 1463 aa15.09■□□□□ 0.01
ITGB5-211ENST00000608107 RPRD2Q5VT52 1461 aaKnown RBP15.09■□□□□ 0.01
ITGB5-211ENST00000608107 SYNMO15061 1565 aa15.08■□□□□ 0
ITGB5-211ENST00000608107 NOS1P29475 1434 aa15.08■□□□□ 0
ITGB5-211ENST00000608107 UGGT1Q9NYU2 1555 aa15.07■□□□□ 0
ITGB5-211ENST00000608107 ANKRD30BQ9BXX2 1392 aa15.07■□□□□ 0
ITGB5-211ENST00000608107 PTPRTO14522 1441 aa15.07■□□□□ 0
ITGB5-211ENST00000608107 SPATA31D1Q6ZQQ2 1576 aa15.07■□□□□ 0
ITGB5-211ENST00000608107 CCER1Q8TC90 406 aaPredicted RBP15.06■□□□□ 0
ITGB5-211ENST00000608107 SETD1BQ9UPS6 1966 aaKnown RBP15.05■□□□□ 0
ITGB5-211ENST00000608107 CLTCL1P53675 1640 aa15.05■□□□□ -0
ITGB5-211ENST00000608107 SIN3AQ96ST3 1273 aa15.04■□□□□ -0
ITGB5-211ENST00000608107 TRPM2O94759 1503 aa15.03■□□□□ -0
ITGB5-211ENST00000608107 TNRQ92752 1358 aa15.03■□□□□ -0
ITGB5-211ENST00000608107 MYO5BQ9ULV0 1848 aa15.02■□□□□ -0
ITGB5-211ENST00000608107 PIK3C2BO00750 1634 aa15.02□□□□□ -0.01
ITGB5-211ENST00000608107 IDI1Q13907 227 aa15.01□□□□□ -0.01
ITGB5-211ENST00000608107 KIF1BO60333 1816 aa15□□□□□ -0.01
ITGB5-211ENST00000608107 MYO3AQ8NEV4 1616 aa14.99□□□□□ -0.01
ITGB5-211ENST00000608107 NEUROD1Q13562 356 aa14.99□□□□□ -0.01
ITGB5-211ENST00000608107 CCDC144AA2RUR9 1427 aa14.98□□□□□ -0.01
ITGB5-211ENST00000608107 CHGAP10645 457 aaKnown RBP14.97□□□□□ -0.01
ITGB5-211ENST00000608107 SLC52A1Q9NWF4 448 aa14.96□□□□□ -0.01
ITGB5-211ENST00000608107 TMEM131LA2VDJ0 1609 aa14.95□□□□□ -0.02
ITGB5-211ENST00000608107 NLRP1Q9C000 1473 aa14.95□□□□□ -0.02
ITGB5-211ENST00000608107 UBR1Q8IWV7 1749 aa14.95□□□□□ -0.02
ITGB5-211ENST00000608107 RGL3Q3MIN7 710 aa14.94□□□□□ -0.02
ITGB5-211ENST00000608107 CEP170BQ9Y4F5 1589 aaPredicted RBP14.94□□□□□ -0.02
ITGB5-211ENST00000608107 ZNF142P52746 1687 aaPredicted RBP14.93□□□□□ -0.02
ITGB5-211ENST00000608107 A2ML1A8K2U0 1454 aa14.93□□□□□ -0.02
ITGB5-211ENST00000608107 CLSPNQ9HAW4 1339 aa14.92□□□□□ -0.02
ITGB5-211ENST00000608107 SPATA31E1Q6ZUB1 1445 aa14.92□□□□□ -0.02
ITGB5-211ENST00000608107 ADGRB3O60242 1522 aa14.92□□□□□ -0.02
ITGB5-211ENST00000608107 STAG3Q9UJ98 1225 aa14.92□□□□□ -0.02
ITGB5-211ENST00000608107 UHRF1BP1Q6BDS2 1440 aa14.92□□□□□ -0.02
ITGB5-211ENST00000608107 KDM5AP29375 1690 aaKnown RBP14.9□□□□□ -0.02
ITGB5-211ENST00000608107 ZNF326Q5BKZ1 582 aaKnown RBP14.89□□□□□ -0.03
ITGB5-211ENST00000608107 IFT172Q9UG01 1749 aa14.88□□□□□ -0.03
ITGB5-211ENST00000608107 LMTK3Q96Q04 1460 aa14.88□□□□□ -0.03
ITGB5-211ENST00000608107 PPLO60437 1756 aa14.88□□□□□ -0.03
ITGB5-211ENST00000608107 HSPA2P54652 639 aa14.87□□□□□ -0.03
ITGB5-211ENST00000608107 NUTM2DQ5VT03 806 aaPredicted RBP14.87□□□□□ -0.03
ITGB5-211ENST00000608107 L3MBTL2Q969R5 705 aa14.87□□□□□ -0.03
ITGB5-211ENST00000608107 NEURL4Q96JN8 1562 aa14.86□□□□□ -0.03
ITGB5-211ENST00000608107 NEXMIFQ5QGS0 1516 aa14.86□□□□□ -0.03
ITGB5-211ENST00000608107 THEMISQ8N1K5 641 aaPredicted RBP14.85□□□□□ -0.03
ITGB5-211ENST00000608107 SENP3Q9H4L4 574 aaPredicted RBP14.85□□□□□ -0.03
ITGB5-211ENST00000608107 KDM2AQ9Y2K7 1162 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms