RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 EIF2AK4Q9P2K8 1649 aaKnown RBP16.14■□□□□ 0.17
LINC01001-203ENST00000607448 KIF3BO15066 747 aa16.13■□□□□ 0.17
LINC01001-203ENST00000607448 MROH1Q8NDA8 1641 aa16.13■□□□□ 0.17
LINC01001-203ENST00000607448 DAPK1P53355 1430 aa16.13■□□□□ 0.17
LINC01001-203ENST00000607448 SHANK2Q9UPX8 1470 aa16.12■□□□□ 0.17
LINC01001-203ENST00000607448 KDM5DQ9BY66 1539 aa16.12■□□□□ 0.17
LINC01001-203ENST00000607448 CEP152O94986 1710 aa16.12■□□□□ 0.17
LINC01001-203ENST00000607448 ZNF142P52746 1687 aaPredicted RBP16.11■□□□□ 0.17
LINC01001-203ENST00000607448 PTPRKQ15262 1439 aa16.11■□□□□ 0.17
LINC01001-203ENST00000607448 NPATQ14207 1427 aa16.1■□□□□ 0.17
LINC01001-203ENST00000607448 DUOX2Q9NRD8 1548 aa16.09■□□□□ 0.17
LINC01001-203ENST00000607448 ZC3H13Q5T200 1668 aaKnown RBP16.08■□□□□ 0.17
LINC01001-203ENST00000607448 PPARGC1BQ86YN6 1023 aaKnown RBP16.08■□□□□ 0.16
LINC01001-203ENST00000607448 FAM135AQ9P2D6 1515 aa16.07■□□□□ 0.16
LINC01001-203ENST00000607448 CFAP65Q6ZU64 1925 aaKnown RBP16.06■□□□□ 0.16
LINC01001-203ENST00000607448 KIF15Q9NS87 1388 aa16.06■□□□□ 0.16
LINC01001-203ENST00000607448 CEP170BQ9Y4F5 1589 aaPredicted RBP16.06■□□□□ 0.16
LINC01001-203ENST00000607448 PPP6R1Q9UPN7 881 aa16.06■□□□□ 0.16
LINC01001-203ENST00000607448 ABCC3O15438 1527 aa16.06■□□□□ 0.16
LINC01001-203ENST00000607448 DEPDC5O75140 1603 aa16.06■□□□□ 0.16
LINC01001-203ENST00000607448 CAMSAP1Q5T5Y3 1602 aa16.06■□□□□ 0.16
LINC01001-203ENST00000607448 CHIC2Q9UKJ5 165 aa16.05■□□□□ 0.16
LINC01001-203ENST00000607448 PZPP20742 1482 aa16.05■□□□□ 0.16
LINC01001-203ENST00000607448 RRP7BPQ9NSQ0 103 aa16.04■□□□□ 0.16
LINC01001-203ENST00000607448 PRDM15P57071 1507 aaPredicted RBP16.04■□□□□ 0.16
LINC01001-203ENST00000607448 WASHC2CQ9Y4E1 1318 aa16.04■□□□□ 0.16
LINC01001-203ENST00000607448 FBXO31Q5XUX0 539 aaPredicted RBP16.04■□□□□ 0.16
LINC01001-203ENST00000607448 ERBINQ96RT1 1412 aa16.03■□□□□ 0.16
LINC01001-203ENST00000607448 FAM50AQ14320 339 aaKnown RBP16.03■□□□□ 0.16
LINC01001-203ENST00000607448 ADGRL2O95490 1459 aa16.01■□□□□ 0.15
LINC01001-203ENST00000607448 NCOA1Q15788 1441 aa16.01■□□□□ 0.15
LINC01001-203ENST00000607448 ILDR1Q86SU0 546 aaPredicted RBP16■□□□□ 0.15
LINC01001-203ENST00000607448 ANKRD30AQ9BXX3 1397 aa15.98■□□□□ 0.15
LINC01001-203ENST00000607448 SPATA31D1Q6ZQQ2 1576 aa15.98■□□□□ 0.15
LINC01001-203ENST00000607448 A2ML1A8K2U0 1454 aa15.98■□□□□ 0.15
LINC01001-203ENST00000607448 TNRQ92752 1358 aa15.97■□□□□ 0.15
LINC01001-203ENST00000607448 POLR1AO95602 1720 aaPredicted RBP15.97■□□□□ 0.15
LINC01001-203ENST00000607448 VWDEQ8N2E2 1590 aa15.96■□□□□ 0.15
LINC01001-203ENST00000607448 ERVK-7P63135 1459 aa15.95■□□□□ 0.14
LINC01001-203ENST00000607448 PLA2R1Q13018 1463 aa15.94■□□□□ 0.14
LINC01001-203ENST00000607448 NCKAP5LQ9HCH0 1330 aa15.94■□□□□ 0.14
LINC01001-203ENST00000607448 PTPRTO14522 1441 aa15.93■□□□□ 0.14
LINC01001-203ENST00000607448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.93■□□□□ 0.14
LINC01001-203ENST00000607448 NEURL4Q96JN8 1562 aa15.92■□□□□ 0.14
LINC01001-203ENST00000607448 UBR1Q8IWV7 1749 aa15.92■□□□□ 0.14
LINC01001-203ENST00000607448 UGGT1Q9NYU2 1555 aa15.92■□□□□ 0.14
LINC01001-203ENST00000607448 NLRP1Q9C000 1473 aa15.91■□□□□ 0.14
LINC01001-203ENST00000607448 ANKRD50Q9ULJ7 1429 aa15.91■□□□□ 0.14
LINC01001-203ENST00000607448 LMTK2Q8IWU2 1503 aa15.91■□□□□ 0.14
LINC01001-203ENST00000607448 DMRT2Q9Y5R5 561 aa15.9■□□□□ 0.14
LINC01001-203ENST00000607448 UNC13BO14795 1591 aa15.9■□□□□ 0.14
LINC01001-203ENST00000607448 LTBP4Q8N2S1 1624 aa15.89■□□□□ 0.13
LINC01001-203ENST00000607448 EFCAB6Q5THR3 1501 aa15.89■□□□□ 0.13
LINC01001-203ENST00000607448 ARHGAP31Q2M1Z3 1444 aa15.89■□□□□ 0.13
LINC01001-203ENST00000607448 ITGAEP38570 1179 aa15.88■□□□□ 0.13
LINC01001-203ENST00000607448 PIK3C2BO00750 1634 aa15.88■□□□□ 0.13
LINC01001-203ENST00000607448 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.88■□□□□ 0.13
LINC01001-203ENST00000607448 SYNMO15061 1565 aa15.87■□□□□ 0.13
LINC01001-203ENST00000607448 RRBP1Q9P2E9 1410 aaKnown RBP15.87■□□□□ 0.13
LINC01001-203ENST00000607448 GCC2Q8IWJ2 1684 aa15.87■□□□□ 0.13
LINC01001-203ENST00000607448 ROCK1Q13464 1354 aa15.86■□□□□ 0.13
LINC01001-203ENST00000607448 KANK1Q14678 1352 aa15.86■□□□□ 0.13
LINC01001-203ENST00000607448 TET3O43151 1660 aa15.86■□□□□ 0.13
LINC01001-203ENST00000607448 CERKQ8TCT0 537 aa15.86■□□□□ 0.13
LINC01001-203ENST00000607448 FBXO41Q8TF61 875 aa15.85■□□□□ 0.13
LINC01001-203ENST00000607448 E9PCH4 1651 aa15.84■□□□□ 0.13
LINC01001-203ENST00000607448 PKD2Q13563 968 aa15.84■□□□□ 0.13
LINC01001-203ENST00000607448 IQGAP3Q86VI3 1631 aa15.83■□□□□ 0.13
LINC01001-203ENST00000607448 IQGAP1P46940 1657 aa15.83■□□□□ 0.12
LINC01001-203ENST00000607448 MYO5BQ9ULV0 1848 aa15.83■□□□□ 0.12
LINC01001-203ENST00000607448 ZNF335Q9H4Z2 1342 aaPredicted RBP15.82■□□□□ 0.12
LINC01001-203ENST00000607448 KDM5AP29375 1690 aaKnown RBP15.81■□□□□ 0.12
LINC01001-203ENST00000607448 THEMISQ8N1K5 641 aaPredicted RBP15.8■□□□□ 0.12
LINC01001-203ENST00000607448 NOS1P29475 1434 aa15.8■□□□□ 0.12
LINC01001-203ENST00000607448 MED14O60244 1454 aa15.79■□□□□ 0.12
LINC01001-203ENST00000607448 STRCP1A6NGW2 1772 aa15.79■□□□□ 0.12
LINC01001-203ENST00000607448 SLIT1O75093 1534 aa15.78■□□□□ 0.12
LINC01001-203ENST00000607448 RPRD2Q5VT52 1461 aaKnown RBP15.77■□□□□ 0.12
LINC01001-203ENST00000607448 ARHGAP23Q9P227 1491 aa15.77■□□□□ 0.12
LINC01001-203ENST00000607448 ANKLE2Q86XL3 938 aa15.77■□□□□ 0.11
LINC01001-203ENST00000607448 NPHP4O75161 1426 aaPredicted RBP15.77■□□□□ 0.11
LINC01001-203ENST00000607448 ADGRB3O60242 1522 aa15.76■□□□□ 0.11
LINC01001-203ENST00000607448 IDI1Q13907 227 aa15.75■□□□□ 0.11
LINC01001-203ENST00000607448 NAIPQ13075 1403 aa15.74■□□□□ 0.11
LINC01001-203ENST00000607448 SCAF11Q99590 1463 aaKnown RBP15.74■□□□□ 0.11
LINC01001-203ENST00000607448 LTKP29376 864 aa15.74■□□□□ 0.11
LINC01001-203ENST00000607448 TMEM131LA2VDJ0 1609 aa15.73■□□□□ 0.11
LINC01001-203ENST00000607448 NUP155O75694 1391 aa15.73■□□□□ 0.11
LINC01001-203ENST00000607448 SPHKAPQ2M3C7 1700 aa15.72■□□□□ 0.11
LINC01001-203ENST00000607448 IQSEC2Q5JU85 1478 aa15.72■□□□□ 0.11
LINC01001-203ENST00000607448 TMEM2Q9UHN6 1383 aa15.71■□□□□ 0.11
LINC01001-203ENST00000607448 XIRP1Q702N8 1843 aaKnown RBP15.68■□□□□ 0.1
LINC01001-203ENST00000607448 CPS1P31327 1500 aa15.68■□□□□ 0.1
LINC01001-203ENST00000607448 HFM1A2PYH4 1435 aa15.68■□□□□ 0.1
LINC01001-203ENST00000607448 TXNDC2Q86VQ3 553 aa15.68■□□□□ 0.1
LINC01001-203ENST00000607448 STAG3Q9UJ98 1225 aa15.68■□□□□ 0.1
LINC01001-203ENST00000607448 SLC52A1Q9NWF4 448 aa15.66■□□□□ 0.1
LINC01001-203ENST00000607448 ZFYVE9O95405 1425 aa15.65■□□□□ 0.1
LINC01001-203ENST00000607448 CLTCL1P53675 1640 aa15.64■□□□□ 0.09
LINC01001-203ENST00000607448 CCER1Q8TC90 406 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms