RNA–Protein interactions for RNA: ENST00000607419.1

LINC01954-201, Transcript of long intergenic non-protein coding RNA 1954, humanhuman

TSL 1 (best) BASIC

Gene LINC01954, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01954-201ENST00000607419 PLXNC1O60486 1568 aa16.07■□□□□ 0.16
LINC01954-201ENST00000607419 NEURL4Q96JN8 1562 aa16.07■□□□□ 0.16
LINC01954-201ENST00000607419 STRCP1A6NGW2 1772 aa16.06■□□□□ 0.16
LINC01954-201ENST00000607419 GGT6Q6P531 493 aa16.05■□□□□ 0.16
LINC01954-201ENST00000607419 INO80Q9ULG1 1556 aaPredicted RBP16.04■□□□□ 0.16
LINC01954-201ENST00000607419 ATP7AQ04656 1500 aa16.04■□□□□ 0.16
LINC01954-201ENST00000607419 SPAG9O60271 1321 aaKnown RBP16.03■□□□□ 0.16
LINC01954-201ENST00000607419 KANK4Q5T7N3 995 aaPredicted RBP16.03■□□□□ 0.16
LINC01954-201ENST00000607419 GPATCH8Q9UKJ3 1502 aaKnown RBP16.03■□□□□ 0.16
LINC01954-201ENST00000607419 FBXO31Q5XUX0 539 aaPredicted RBP16.02■□□□□ 0.16
LINC01954-201ENST00000607419 A2MP01023 1474 aa16.02■□□□□ 0.15
LINC01954-201ENST00000607419 SHANK2Q9UPX8 1470 aa16.02■□□□□ 0.15
LINC01954-201ENST00000607419 A2ML1A8K2U0 1454 aa16.01■□□□□ 0.15
LINC01954-201ENST00000607419 VWDEQ8N2E2 1590 aa16■□□□□ 0.15
LINC01954-201ENST00000607419 TOM1O60784 492 aa16■□□□□ 0.15
LINC01954-201ENST00000607419 RGS17Q9UGC6 210 aaPredicted RBP16■□□□□ 0.15
LINC01954-201ENST00000607419 ADGBQ8N7X0 1667 aa15.98■□□□□ 0.15
LINC01954-201ENST00000607419 CPS1P31327 1500 aa15.98■□□□□ 0.15
LINC01954-201ENST00000607419 NCOA2Q15596 1464 aa15.97■□□□□ 0.15
LINC01954-201ENST00000607419 ZNF644Q9H582 1327 aaPredicted RBP15.95■□□□□ 0.14
LINC01954-201ENST00000607419 PPARGC1BQ86YN6 1023 aaKnown RBP15.95■□□□□ 0.14
LINC01954-201ENST00000607419 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.95■□□□□ 0.14
LINC01954-201ENST00000607419 KIAA1107Q9UPP5 1409 aa15.94■□□□□ 0.14
LINC01954-201ENST00000607419 XIRP1Q702N8 1843 aaKnown RBP15.93■□□□□ 0.14
LINC01954-201ENST00000607419 CFAP65Q6ZU64 1925 aaKnown RBP15.92■□□□□ 0.14
LINC01954-201ENST00000607419 CCNB3Q8WWL7 1395 aa15.91■□□□□ 0.14
LINC01954-201ENST00000607419 CFDP1Q9UEE9 299 aaPredicted RBP15.9■□□□□ 0.14
LINC01954-201ENST00000607419 TNRQ92752 1358 aa15.89■□□□□ 0.13
LINC01954-201ENST00000607419 DEPDC5O75140 1603 aa15.89■□□□□ 0.13
LINC01954-201ENST00000607419 MED14O60244 1454 aa15.89■□□□□ 0.13
LINC01954-201ENST00000607419 MBD5Q9P267 1494 aa15.89■□□□□ 0.13
LINC01954-201ENST00000607419 IQGAP1P46940 1657 aa15.89■□□□□ 0.13
LINC01954-201ENST00000607419 LRRC7Q96NW7 1537 aa15.89■□□□□ 0.13
LINC01954-201ENST00000607419 MYOM3Q5VTT5 1437 aa15.88■□□□□ 0.13
LINC01954-201ENST00000607419 ANKLE2Q86XL3 938 aa15.88■□□□□ 0.13
LINC01954-201ENST00000607419 DHX29Q7Z478 1369 aaKnown RBP15.87■□□□□ 0.13
LINC01954-201ENST00000607419 NPHP4O75161 1426 aaPredicted RBP15.86■□□□□ 0.13
LINC01954-201ENST00000607419 PZPP20742 1482 aa15.86■□□□□ 0.13
LINC01954-201ENST00000607419 ZC3H13Q5T200 1668 aaKnown RBP15.86■□□□□ 0.13
LINC01954-201ENST00000607419 UGGT1Q9NYU2 1555 aa15.85■□□□□ 0.13
LINC01954-201ENST00000607419 KIF3BO15066 747 aa15.85■□□□□ 0.13
LINC01954-201ENST00000607419 POTEAQ6S8J7 498 aa15.85■□□□□ 0.13
LINC01954-201ENST00000607419 MIA2Q96PC5 1412 aa15.85■□□□□ 0.13
LINC01954-201ENST00000607419 PLEKHH2Q8IVE3 1493 aa15.84■□□□□ 0.13
LINC01954-201ENST00000607419 PTPN23Q9H3S7 1636 aa15.83■□□□□ 0.13
LINC01954-201ENST00000607419 THEMISQ8N1K5 641 aaPredicted RBP15.83■□□□□ 0.12
LINC01954-201ENST00000607419 FGD6Q6ZV73 1430 aa15.83■□□□□ 0.12
LINC01954-201ENST00000607419 RNF17Q9BXT8 1623 aaKnown RBP15.82■□□□□ 0.12
LINC01954-201ENST00000607419 RTEL1-TNFRSF6BF6WH68 1400 aa15.81■□□□□ 0.12
LINC01954-201ENST00000607419 KDM5DQ9BY66 1539 aa15.81■□□□□ 0.12
LINC01954-201ENST00000607419 SETD1AO15047 1707 aaKnown RBP15.8■□□□□ 0.12
LINC01954-201ENST00000607419 WASHC2CQ9Y4E1 1318 aa15.8■□□□□ 0.12
LINC01954-201ENST00000607419 RRBP1Q9P2E9 1410 aaKnown RBP15.79■□□□□ 0.12
LINC01954-201ENST00000607419 UBR1Q8IWV7 1749 aa15.78■□□□□ 0.12
LINC01954-201ENST00000607419 SYNMO15061 1565 aa15.78■□□□□ 0.12
LINC01954-201ENST00000607419 CAMSAP2Q08AD1 1489 aa15.78■□□□□ 0.12
LINC01954-201ENST00000607419 NLRP1Q9C000 1473 aa15.78■□□□□ 0.12
LINC01954-201ENST00000607419 FAM135AQ9P2D6 1515 aa15.77■□□□□ 0.11
LINC01954-201ENST00000607419 LTKP29376 864 aa15.75■□□□□ 0.11
LINC01954-201ENST00000607419 CEP152O94986 1710 aa15.74■□□□□ 0.11
LINC01954-201ENST00000607419 ARHGEF5Q12774 1597 aa15.74■□□□□ 0.11
LINC01954-201ENST00000607419 CROCC2H7BZ55 1655 aa15.73■□□□□ 0.11
LINC01954-201ENST00000607419 FAM50AQ14320 339 aaKnown RBP15.71■□□□□ 0.11
LINC01954-201ENST00000607419 ABCC3O15438 1527 aa15.7■□□□□ 0.1
LINC01954-201ENST00000607419 MROH1Q8NDA8 1641 aa15.7■□□□□ 0.1
LINC01954-201ENST00000607419 ROBO1Q9Y6N7 1651 aa15.7■□□□□ 0.1
LINC01954-201ENST00000607419 RSPH4AQ5TD94 716 aa15.69■□□□□ 0.1
LINC01954-201ENST00000607419 RBM33Q96EV2 1170 aaKnown RBP15.69■□□□□ 0.1
LINC01954-201ENST00000607419 ERVK-7P63135 1459 aa15.69■□□□□ 0.1
LINC01954-201ENST00000607419 CCDC141Q6ZP82 1450 aa15.69■□□□□ 0.1
LINC01954-201ENST00000607419 FAM135BQ49AJ0 1406 aa15.68■□□□□ 0.1
LINC01954-201ENST00000607419 TRIM26Q12899 539 aaPredicted RBP15.67■□□□□ 0.1
LINC01954-201ENST00000607419 SCAF11Q99590 1463 aaKnown RBP15.66■□□□□ 0.1
LINC01954-201ENST00000607419 ARHGAP23Q9P227 1491 aa15.66■□□□□ 0.1
LINC01954-201ENST00000607419 TXNDC2Q86VQ3 553 aa15.66■□□□□ 0.1
LINC01954-201ENST00000607419 DAPK1P53355 1430 aa15.66■□□□□ 0.1
LINC01954-201ENST00000607419 MAST1Q9Y2H9 1570 aa15.65■□□□□ 0.1
LINC01954-201ENST00000607419 SLIT1O75093 1534 aa15.64■□□□□ 0.09
LINC01954-201ENST00000607419 ABCC5O15440 1437 aa15.64■□□□□ 0.09
LINC01954-201ENST00000607419 PIK3C2BO00750 1634 aa15.63■□□□□ 0.09
LINC01954-201ENST00000607419 PHLPP1O60346 1717 aa15.61■□□□□ 0.09
LINC01954-201ENST00000607419 TSPY4P0CV99 314 aa15.61■□□□□ 0.09
LINC01954-201ENST00000607419 TSPY10P0CW01 314 aa15.61■□□□□ 0.09
LINC01954-201ENST00000607419 TMEM94Q12767 1356 aa15.61■□□□□ 0.09
LINC01954-201ENST00000607419 TET3O43151 1660 aa15.6■□□□□ 0.09
LINC01954-201ENST00000607419 EIF2AK4Q9P2K8 1649 aaKnown RBP15.59■□□□□ 0.09
LINC01954-201ENST00000607419 ITGAEP38570 1179 aa15.59■□□□□ 0.09
LINC01954-201ENST00000607419 UPF1Q92900 1129 aaKnown RBP eCLIP15.59■□□□□ 0.09
LINC01954-201ENST00000607419 ADGRL2O95490 1459 aa15.57■□□□□ 0.08
LINC01954-201ENST00000607419 SLC26A8Q96RN1 970 aa15.56■□□□□ 0.08
LINC01954-201ENST00000607419 GCC2Q8IWJ2 1684 aa15.56■□□□□ 0.08
LINC01954-201ENST00000607419 LRP6O75581 1613 aa15.55■□□□□ 0.08
LINC01954-201ENST00000607419 ROCK1Q13464 1354 aa15.55■□□□□ 0.08
LINC01954-201ENST00000607419 KCNA6P17658 529 aa15.55■□□□□ 0.08
LINC01954-201ENST00000607419 PROSER2Q86WR7 435 aaPredicted RBP15.55■□□□□ 0.08
LINC01954-201ENST00000607419 MYO5BQ9ULV0 1848 aa15.54■□□□□ 0.08
LINC01954-201ENST00000607419 ANKRD30AQ9BXX3 1397 aa15.54■□□□□ 0.08
LINC01954-201ENST00000607419 TMEM2Q9UHN6 1383 aa15.54■□□□□ 0.08
LINC01954-201ENST00000607419 CHIC2Q9UKJ5 165 aa15.54■□□□□ 0.08
LINC01954-201ENST00000607419 CHD2O14647 1828 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms