RNA–Protein interactions for RNA: ENST00000607320.5

RFTN1-212, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 3

Gene RFTN1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-212ENST00000607320 MAP3K1Q13233 1512 aa16.9■□□□□ 0.3
RFTN1-212ENST00000607320 DHX29Q7Z478 1369 aaKnown RBP16.89■□□□□ 0.29
RFTN1-212ENST00000607320 ARHGEF5Q12774 1597 aa16.88■□□□□ 0.29
RFTN1-212ENST00000607320 CERKQ8TCT0 537 aa16.86■□□□□ 0.29
RFTN1-212ENST00000607320 TSPY4P0CV99 314 aa16.85■□□□□ 0.29
RFTN1-212ENST00000607320 TSPY10P0CW01 314 aa16.85■□□□□ 0.29
RFTN1-212ENST00000607320 PTPRTO14522 1441 aa16.85■□□□□ 0.29
RFTN1-212ENST00000607320 MYO3AQ8NEV4 1616 aa16.84■□□□□ 0.29
RFTN1-212ENST00000607320 ZNF142P52746 1687 aaPredicted RBP16.84■□□□□ 0.29
RFTN1-212ENST00000607320 PTPRKQ15262 1439 aa16.83■□□□□ 0.28
RFTN1-212ENST00000607320 NCOA1Q15788 1441 aa16.83■□□□□ 0.28
RFTN1-212ENST00000607320 FAM135AQ9P2D6 1515 aa16.83■□□□□ 0.28
RFTN1-212ENST00000607320 CAMSAP1Q5T5Y3 1602 aa16.82■□□□□ 0.28
RFTN1-212ENST00000607320 KIF3BO15066 747 aa16.82■□□□□ 0.28
RFTN1-212ENST00000607320 MIA2Q96PC5 1412 aa16.81■□□□□ 0.28
RFTN1-212ENST00000607320 KANK4Q5T7N3 995 aaPredicted RBP16.81■□□□□ 0.28
RFTN1-212ENST00000607320 MYOM3Q5VTT5 1437 aa16.8■□□□□ 0.28
RFTN1-212ENST00000607320 APLP2Q06481 763 aa16.8■□□□□ 0.28
RFTN1-212ENST00000607320 MAST1Q9Y2H9 1570 aa16.8■□□□□ 0.28
RFTN1-212ENST00000607320 CEP170BQ9Y4F5 1589 aaPredicted RBP16.8■□□□□ 0.28
RFTN1-212ENST00000607320 KDM5DQ9BY66 1539 aa16.8■□□□□ 0.28
RFTN1-212ENST00000607320 PLA2R1Q13018 1463 aa16.77■□□□□ 0.28
RFTN1-212ENST00000607320 WASHC2CQ9Y4E1 1318 aa16.76■□□□□ 0.27
RFTN1-212ENST00000607320 PZPP20742 1482 aa16.75■□□□□ 0.27
RFTN1-212ENST00000607320 PKD2Q13563 968 aa16.75■□□□□ 0.27
RFTN1-212ENST00000607320 RNF17Q9BXT8 1623 aaKnown RBP16.74■□□□□ 0.27
RFTN1-212ENST00000607320 EIF2AK4Q9P2K8 1649 aaKnown RBP16.74■□□□□ 0.27
RFTN1-212ENST00000607320 A2ML1A8K2U0 1454 aa16.74■□□□□ 0.27
RFTN1-212ENST00000607320 ZC3H13Q5T200 1668 aaKnown RBP16.73■□□□□ 0.27
RFTN1-212ENST00000607320 DNMT1P26358 1616 aaKnown RBP16.73■□□□□ 0.27
RFTN1-212ENST00000607320 TNRQ92752 1358 aa16.72■□□□□ 0.27
RFTN1-212ENST00000607320 TCOF1Q13428 1488 aaKnown RBP16.72■□□□□ 0.27
RFTN1-212ENST00000607320 NCKAP5LQ9HCH0 1330 aa16.71■□□□□ 0.27
RFTN1-212ENST00000607320 LTBP4Q8N2S1 1624 aa16.71■□□□□ 0.27
RFTN1-212ENST00000607320 PTPN23Q9H3S7 1636 aa16.71■□□□□ 0.27
RFTN1-212ENST00000607320 CROCC2H7BZ55 1655 aa16.71■□□□□ 0.27
RFTN1-212ENST00000607320 IQSEC2Q5JU85 1478 aa16.7■□□□□ 0.26
RFTN1-212ENST00000607320 DUOX2Q9NRD8 1548 aa16.7■□□□□ 0.26
RFTN1-212ENST00000607320 HOXD11P31277 338 aaPredicted RBP16.69■□□□□ 0.26
RFTN1-212ENST00000607320 FBXO31Q5XUX0 539 aaPredicted RBP16.69■□□□□ 0.26
RFTN1-212ENST00000607320 POLR1AO95602 1720 aaPredicted RBP16.69■□□□□ 0.26
RFTN1-212ENST00000607320 SHANK2Q9UPX8 1470 aa16.68■□□□□ 0.26
RFTN1-212ENST00000607320 NLRP1Q9C000 1473 aa16.67■□□□□ 0.26
RFTN1-212ENST00000607320 ABCC3O15438 1527 aa16.67■□□□□ 0.26
RFTN1-212ENST00000607320 CFAP65Q6ZU64 1925 aaKnown RBP16.66■□□□□ 0.26
RFTN1-212ENST00000607320 CEP152O94986 1710 aa16.65■□□□□ 0.26
RFTN1-212ENST00000607320 FGD6Q6ZV73 1430 aa16.65■□□□□ 0.26
RFTN1-212ENST00000607320 MROH1Q8NDA8 1641 aa16.65■□□□□ 0.26
RFTN1-212ENST00000607320 KIF15Q9NS87 1388 aa16.64■□□□□ 0.26
RFTN1-212ENST00000607320 ABCC5O15440 1437 aa16.64■□□□□ 0.25
RFTN1-212ENST00000607320 UGGT1Q9NYU2 1555 aa16.64■□□□□ 0.25
RFTN1-212ENST00000607320 DAPK1P53355 1430 aa16.63■□□□□ 0.25
RFTN1-212ENST00000607320 ERBINQ96RT1 1412 aa16.63■□□□□ 0.25
RFTN1-212ENST00000607320 THEMISQ8N1K5 641 aaPredicted RBP16.63■□□□□ 0.25
RFTN1-212ENST00000607320 ZNF335Q9H4Z2 1342 aaPredicted RBP16.63■□□□□ 0.25
RFTN1-212ENST00000607320 SPATA31D1Q6ZQQ2 1576 aa16.63■□□□□ 0.25
RFTN1-212ENST00000607320 PRDM15P57071 1507 aaPredicted RBP16.61■□□□□ 0.25
RFTN1-212ENST00000607320 ANKLE2Q86XL3 938 aa16.61■□□□□ 0.25
RFTN1-212ENST00000607320 NEURL4Q96JN8 1562 aa16.6■□□□□ 0.25
RFTN1-212ENST00000607320 RRP7BPQ9NSQ0 103 aa16.6■□□□□ 0.25
RFTN1-212ENST00000607320 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.6■□□□□ 0.25
RFTN1-212ENST00000607320 ERVK-7P63135 1459 aa16.6■□□□□ 0.25
RFTN1-212ENST00000607320 ANKRD30AQ9BXX3 1397 aa16.59■□□□□ 0.25
RFTN1-212ENST00000607320 DEPDC5O75140 1603 aa16.59■□□□□ 0.25
RFTN1-212ENST00000607320 KANK1Q14678 1352 aa16.57■□□□□ 0.24
RFTN1-212ENST00000607320 ARHGAP31Q2M1Z3 1444 aa16.56■□□□□ 0.24
RFTN1-212ENST00000607320 CHIC2Q9UKJ5 165 aa16.55■□□□□ 0.24
RFTN1-212ENST00000607320 CPS1P31327 1500 aa16.55■□□□□ 0.24
RFTN1-212ENST00000607320 MED14O60244 1454 aa16.54■□□□□ 0.24
RFTN1-212ENST00000607320 UBR1Q8IWV7 1749 aa16.54■□□□□ 0.24
RFTN1-212ENST00000607320 IQGAP1P46940 1657 aa16.54■□□□□ 0.24
RFTN1-212ENST00000607320 SLC4A2P04920 1241 aa16.54■□□□□ 0.24
RFTN1-212ENST00000607320 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.54■□□□□ 0.24
RFTN1-212ENST00000607320 NPHP4O75161 1426 aaPredicted RBP16.53■□□□□ 0.24
RFTN1-212ENST00000607320 UBAP1LF5GYI3 381 aa16.52■□□□□ 0.24
RFTN1-212ENST00000607320 FAM50AQ14320 339 aaKnown RBP16.52■□□□□ 0.24
RFTN1-212ENST00000607320 ADGRL2O95490 1459 aa16.52■□□□□ 0.23
RFTN1-212ENST00000607320 LMTK2Q8IWU2 1503 aa16.5■□□□□ 0.23
RFTN1-212ENST00000607320 ATXN8OSP0DMR3 200 aa16.5■□□□□ 0.23
RFTN1-212ENST00000607320 VWDEQ8N2E2 1590 aa16.5■□□□□ 0.23
RFTN1-212ENST00000607320 AMER1Q5JTC6 1135 aaPredicted RBP16.47■□□□□ 0.23
RFTN1-212ENST00000607320 SCAF11Q99590 1463 aaKnown RBP16.47■□□□□ 0.23
RFTN1-212ENST00000607320 KDM5AP29375 1690 aaKnown RBP16.46■□□□□ 0.23
RFTN1-212ENST00000607320 SLIT1O75093 1534 aa16.46■□□□□ 0.23
RFTN1-212ENST00000607320 PIK3C2BO00750 1634 aa16.46■□□□□ 0.23
RFTN1-212ENST00000607320 ARHGAP23Q9P227 1491 aa16.46■□□□□ 0.23
RFTN1-212ENST00000607320 ANKRD50Q9ULJ7 1429 aa16.45■□□□□ 0.22
RFTN1-212ENST00000607320 EFCAB6Q5THR3 1501 aa16.45■□□□□ 0.22
RFTN1-212ENST00000607320 TOM1O60784 492 aa16.45■□□□□ 0.22
RFTN1-212ENST00000607320 MYCNP04198 464 aaPredicted RBP16.45■□□□□ 0.22
RFTN1-212ENST00000607320 STAG3Q9UJ98 1225 aa16.45■□□□□ 0.22
RFTN1-212ENST00000607320 DISP3Q9P2K9 1392 aa16.45■□□□□ 0.22
RFTN1-212ENST00000607320 EID1Q9Y6B2 187 aa16.44■□□□□ 0.22
RFTN1-212ENST00000607320 TXNDC2Q86VQ3 553 aa16.43■□□□□ 0.22
RFTN1-212ENST00000607320 SYNMO15061 1565 aa16.43■□□□□ 0.22
RFTN1-212ENST00000607320 STRCP1A6NGW2 1772 aa16.42■□□□□ 0.22
RFTN1-212ENST00000607320 LTKP29376 864 aa16.41■□□□□ 0.22
RFTN1-212ENST00000607320 RPRD2Q5VT52 1461 aaKnown RBP16.41■□□□□ 0.22
RFTN1-212ENST00000607320 TET3O43151 1660 aa16.4■□□□□ 0.22
RFTN1-212ENST00000607320 TMEM2Q9UHN6 1383 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms