RNA–Protein interactions for RNA: ENST00000606699.5

NECAB3-220, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,022 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-220ENST00000606699 FAM135AQ9P2D6 1515 aa29.61■■■□□ 2.33
NECAB3-220ENST00000606699 CCDC141Q6ZP82 1450 aa29.6■■■□□ 2.33
NECAB3-220ENST00000606699 DNMT1P26358 1616 aaKnown RBP29.6■■■□□ 2.33
NECAB3-220ENST00000606699 TNRQ92752 1358 aa29.59■■■□□ 2.33
NECAB3-220ENST00000606699 FBXO31Q5XUX0 539 aaPredicted RBP29.58■■■□□ 2.33
NECAB3-220ENST00000606699 WASHC2CQ9Y4E1 1318 aa29.58■■■□□ 2.33
NECAB3-220ENST00000606699 PZPP20742 1482 aa29.56■■■□□ 2.32
NECAB3-220ENST00000606699 KDM5DQ9BY66 1539 aa29.55■■■□□ 2.32
NECAB3-220ENST00000606699 NCOA2Q15596 1464 aa29.55■■■□□ 2.32
NECAB3-220ENST00000606699 CAMSAP2Q08AD1 1489 aa29.54■■■□□ 2.32
NECAB3-220ENST00000606699 TSPY4P0CV99 314 aa29.53■■■□□ 2.32
NECAB3-220ENST00000606699 TSPY10P0CW01 314 aa29.53■■■□□ 2.32
NECAB3-220ENST00000606699 ANKLE2Q86XL3 938 aa29.52■■■□□ 2.32
NECAB3-220ENST00000606699 THEMISQ8N1K5 641 aaPredicted RBP29.52■■■□□ 2.32
NECAB3-220ENST00000606699 MIA2Q96PC5 1412 aa29.5■■■□□ 2.31
NECAB3-220ENST00000606699 CPS1P31327 1500 aa29.48■■■□□ 2.31
NECAB3-220ENST00000606699 NLRP1Q9C000 1473 aa29.48■■■□□ 2.31
NECAB3-220ENST00000606699 TOM1O60784 492 aa29.47■■■□□ 2.31
NECAB3-220ENST00000606699 SHANK2Q9UPX8 1470 aa29.46■■■□□ 2.31
NECAB3-220ENST00000606699 ARHGEF5Q12774 1597 aa29.46■■■□□ 2.31
NECAB3-220ENST00000606699 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.45■■■□□ 2.315e-7■■■■■ 29.7
NECAB3-220ENST00000606699 NEURL4Q96JN8 1562 aa29.44■■■□□ 2.3
NECAB3-220ENST00000606699 POLR1AO95602 1720 aaPredicted RBP29.43■■■□□ 2.3
NECAB3-220ENST00000606699 UGGT1Q9NYU2 1555 aa29.4■■■□□ 2.3
NECAB3-220ENST00000606699 MED14O60244 1454 aa29.4■■■□□ 2.3
NECAB3-220ENST00000606699 SCAF1Q9H7N4 1312 aaKnown RBP29.38■■■□□ 2.29
NECAB3-220ENST00000606699 HSPA1LP34931 641 aa29.37■■■□□ 2.29
NECAB3-220ENST00000606699 PIP4K2BP78356 416 aa29.37■■■□□ 2.29
NECAB3-220ENST00000606699 NPHP4O75161 1426 aaPredicted RBP29.37■■■□□ 2.29
NECAB3-220ENST00000606699 DEPDC5O75140 1603 aa29.35■■■□□ 2.29
NECAB3-220ENST00000606699 LRRC9Q6ZRR7 1453 aa29.35■■■□□ 2.29
NECAB3-220ENST00000606699 VWDEQ8N2E2 1590 aa29.33■■■□□ 2.29
NECAB3-220ENST00000606699 RNF17Q9BXT8 1623 aaKnown RBP29.31■■■□□ 2.28
NECAB3-220ENST00000606699 MAST1Q9Y2H9 1570 aa29.31■■■□□ 2.28
NECAB3-220ENST00000606699 VPS8Q8N3P4 1428 aa29.3■■■□□ 2.28
NECAB3-220ENST00000606699 ABCC3O15438 1527 aa29.3■■■□□ 2.28
NECAB3-220ENST00000606699 ZC3H13Q5T200 1668 aaKnown RBP29.28■■■□□ 2.28
NECAB3-220ENST00000606699 EIF2AK4Q9P2K8 1649 aaKnown RBP29.25■■■□□ 2.27
NECAB3-220ENST00000606699 MAP3K1Q13233 1512 aa29.25■■■□□ 2.27
NECAB3-220ENST00000606699 ERVK-7P63135 1459 aa29.24■■■□□ 2.27
NECAB3-220ENST00000606699 MYOM3Q5VTT5 1437 aa29.23■■■□□ 2.27
NECAB3-220ENST00000606699 IQGAP1P46940 1657 aa29.22■■■□□ 2.27
NECAB3-220ENST00000606699 KANK4Q5T7N3 995 aaPredicted RBP29.22■■■□□ 2.27
NECAB3-220ENST00000606699 MED1Q15648 1581 aaPredicted RBP29.19■■■□□ 2.26
NECAB3-220ENST00000606699 DUOX2Q9NRD8 1548 aa29.18■■■□□ 2.26
NECAB3-220ENST00000606699 MROH1Q8NDA8 1641 aa29.17■■■□□ 2.26
NECAB3-220ENST00000606699 ALKQ9UM73 1620 aa29.16■■■□□ 2.26
NECAB3-220ENST00000606699 LRRC7Q96NW7 1537 aa29.16■■■□□ 2.26
NECAB3-220ENST00000606699 ARHGAP31Q2M1Z3 1444 aa29.15■■■□□ 2.26
NECAB3-220ENST00000606699 LOC105371045A0A1W2PR82 267 aa29.13■■■□□ 2.25
NECAB3-220ENST00000606699 SCAF11Q99590 1463 aaKnown RBP29.12■■■□□ 2.25
NECAB3-220ENST00000606699 TXNDC2Q86VQ3 553 aa29.11■■■□□ 2.25
NECAB3-220ENST00000606699 KIF15Q9NS87 1388 aa29.11■■■□□ 2.25
NECAB3-220ENST00000606699 SYNMO15061 1565 aa29.1■■■□□ 2.25
NECAB3-220ENST00000606699 LTKP29376 864 aa29.1■■■□□ 2.25
NECAB3-220ENST00000606699 ERBINQ96RT1 1412 aa29.1■■■□□ 2.25
NECAB3-220ENST00000606699 ARHGAP23Q9P227 1491 aa29.1■■■□□ 2.25
NECAB3-220ENST00000606699 UBR1Q8IWV7 1749 aa29.09■■■□□ 2.25
NECAB3-220ENST00000606699 PHF23Q9BUL5 403 aaPredicted RBP29.09■■■□□ 2.25
NECAB3-220ENST00000606699 EID1Q9Y6B2 187 aa29.09■■■□□ 2.25
NECAB3-220ENST00000606699 SLIT1O75093 1534 aa29.09■■■□□ 2.25
NECAB3-220ENST00000606699 STRCP1A6NGW2 1772 aa29.08■■■□□ 2.25
NECAB3-220ENST00000606699 CEP152O94986 1710 aa29.07■■■□□ 2.24
NECAB3-220ENST00000606699 PRDM15P57071 1507 aaPredicted RBP29.06■■■□□ 2.24
NECAB3-220ENST00000606699 RRP7BPQ9NSQ0 103 aa29.06■■■□□ 2.24
NECAB3-220ENST00000606699 ABCC5O15440 1437 aa29.05■■■□□ 2.24
NECAB3-220ENST00000606699 CFAP65Q6ZU64 1925 aaKnown RBP29.03■■■□□ 2.24
NECAB3-220ENST00000606699 KANK1Q14678 1352 aa29.02■■■□□ 2.24
NECAB3-220ENST00000606699 APLP2Q06481 763 aa29■■■□□ 2.23
NECAB3-220ENST00000606699 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29■■■□□ 2.235e-11■□□□□ 9.2
NECAB3-220ENST00000606699 TMEM2Q9UHN6 1383 aa29■■■□□ 2.23
NECAB3-220ENST00000606699 STAG3Q9UJ98 1225 aa28.99■■■□□ 2.23
NECAB3-220ENST00000606699 DAPK1P53355 1430 aa28.96■■■□□ 2.23
NECAB3-220ENST00000606699 PTPN23Q9H3S7 1636 aa28.95■■■□□ 2.23
NECAB3-220ENST00000606699 CROCC2H7BZ55 1655 aa28.94■■■□□ 2.22
NECAB3-220ENST00000606699 SENP3Q9H4L4 574 aaPredicted RBP28.94■■■□□ 2.22
NECAB3-220ENST00000606699 ANKRD30AQ9BXX3 1397 aa28.93■■■□□ 2.22
NECAB3-220ENST00000606699 IDI1Q13907 227 aa28.93■■■□□ 2.22
NECAB3-220ENST00000606699 LMTK2Q8IWU2 1503 aa28.93■■■□□ 2.22
NECAB3-220ENST00000606699 FAM135BQ49AJ0 1406 aa28.91■■■□□ 2.22
NECAB3-220ENST00000606699 PIK3C2BO00750 1634 aa28.91■■■□□ 2.22
NECAB3-220ENST00000606699 KCNA6P17658 529 aa28.9■■■□□ 2.22
NECAB3-220ENST00000606699 FGD6Q6ZV73 1430 aa28.9■■■□□ 2.22
NECAB3-220ENST00000606699 KDM5AP29375 1690 aaKnown RBP28.89■■■□□ 2.22
NECAB3-220ENST00000606699 EFCAB6Q5THR3 1501 aa28.89■■■□□ 2.21
NECAB3-220ENST00000606699 CHIC2Q9UKJ5 165 aa28.87■■■□□ 2.21
NECAB3-220ENST00000606699 SLC52A1Q9NWF4 448 aa28.86■■■□□ 2.21
NECAB3-220ENST00000606699 TMEM94Q12767 1356 aa28.85■■■□□ 2.21
NECAB3-220ENST00000606699 NOS1P29475 1434 aa28.84■■■□□ 2.21
NECAB3-220ENST00000606699 XIRP1Q702N8 1843 aaKnown RBP28.83■■■□□ 2.21
NECAB3-220ENST00000606699 PROSER2Q86WR7 435 aaPredicted RBP28.82■■■□□ 2.2
NECAB3-220ENST00000606699 TET3O43151 1660 aa28.82■■■□□ 2.2
NECAB3-220ENST00000606699 SLC26A8Q96RN1 970 aa28.81■■■□□ 2.2
NECAB3-220ENST00000606699 RGS17Q9UGC6 210 aaPredicted RBP28.81■■■□□ 2.2
NECAB3-220ENST00000606699 ADGRL2O95490 1459 aa28.76■■■□□ 2.19
NECAB3-220ENST00000606699 ADGRB3O60242 1522 aa28.74■■■□□ 2.19
NECAB3-220ENST00000606699 NKTRP30414 1462 aaKnown RBP28.74■■■□□ 2.19
NECAB3-220ENST00000606699 RPRD2Q5VT52 1461 aaKnown RBP28.74■■■□□ 2.19
NECAB3-220ENST00000606699 HDGFP51858 240 aaKnown RBP28.74■■■□□ 2.19
NECAB3-220ENST00000606699 BCANQ96GW7 911 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms