RNA–Protein interactions for RNA: ENST00000606576.1

LCE1C-201, Transcript of late cornified envelope 1C, humanhuman

APPRIS ALT2 TSL 3

Gene LCE1C, Length 211 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE1C-201ENST00000606576 PTPRKQ15262 1439 aa25.58■■□□□ 1.69
LCE1C-201ENST00000606576 RNF17Q9BXT8 1623 aaKnown RBP25.56■■□□□ 1.68
LCE1C-201ENST00000606576 EIF2AK4Q9P2K8 1649 aaKnown RBP25.56■■□□□ 1.68
LCE1C-201ENST00000606576 NCOA1Q15788 1441 aa25.56■■□□□ 1.68
LCE1C-201ENST00000606576 PREX1Q8TCU6 1659 aa25.56■■□□□ 1.68
LCE1C-201ENST00000606576 MROH1Q8NDA8 1641 aa25.55■■□□□ 1.68
LCE1C-201ENST00000606576 SETD1BQ9UPS6 1966 aaKnown RBP25.55■■□□□ 1.68
LCE1C-201ENST00000606576 ANKRD30AQ9BXX3 1397 aa25.54■■□□□ 1.68
LCE1C-201ENST00000606576 ADGRL2O95490 1459 aa25.53■■□□□ 1.68
LCE1C-201ENST00000606576 KDM5DQ9BY66 1539 aa25.53■■□□□ 1.68
LCE1C-201ENST00000606576 WASHC2CQ9Y4E1 1318 aa25.52■■□□□ 1.68
LCE1C-201ENST00000606576 ERBINQ96RT1 1412 aa25.51■■□□□ 1.67
LCE1C-201ENST00000606576 NPATQ14207 1427 aa25.5■■□□□ 1.67
LCE1C-201ENST00000606576 UHRF1BP1Q6BDS2 1440 aa25.5■■□□□ 1.67
LCE1C-201ENST00000606576 FAM135AQ9P2D6 1515 aa25.47■■□□□ 1.67
LCE1C-201ENST00000606576 FBXO31Q5XUX0 539 aaPredicted RBP25.47■■□□□ 1.67
LCE1C-201ENST00000606576 ABCC3O15438 1527 aa25.47■■□□□ 1.67
LCE1C-201ENST00000606576 ITGAEP38570 1179 aa25.46■■□□□ 1.67
LCE1C-201ENST00000606576 RRBP1Q9P2E9 1410 aaKnown RBP25.46■■□□□ 1.67
LCE1C-201ENST00000606576 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.45■■□□□ 1.67
LCE1C-201ENST00000606576 CEP152O94986 1710 aa25.43■■□□□ 1.66
LCE1C-201ENST00000606576 PRDM15P57071 1507 aaPredicted RBP25.43■■□□□ 1.66
LCE1C-201ENST00000606576 PZPP20742 1482 aa25.43■■□□□ 1.66
LCE1C-201ENST00000606576 DEPDC5O75140 1603 aa25.43■■□□□ 1.66
LCE1C-201ENST00000606576 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.42■■□□□ 1.66
LCE1C-201ENST00000606576 ZC3H13Q5T200 1668 aaKnown RBP25.41■■□□□ 1.66
LCE1C-201ENST00000606576 MYO3AQ8NEV4 1616 aa25.4■■□□□ 1.66
LCE1C-201ENST00000606576 ROCK1Q13464 1354 aa25.39■■□□□ 1.65
LCE1C-201ENST00000606576 ANKRD50Q9ULJ7 1429 aa25.38■■□□□ 1.65
LCE1C-201ENST00000606576 CAMSAP1Q5T5Y3 1602 aa25.37■■□□□ 1.65
LCE1C-201ENST00000606576 STRCQ7RTU9 1775 aa25.36■■□□□ 1.65
LCE1C-201ENST00000606576 TNRQ92752 1358 aa25.35■■□□□ 1.65
LCE1C-201ENST00000606576 VWDEQ8N2E2 1590 aa25.35■■□□□ 1.65
LCE1C-201ENST00000606576 ZNF142P52746 1687 aaPredicted RBP25.34■■□□□ 1.65
LCE1C-201ENST00000606576 CEP170BQ9Y4F5 1589 aaPredicted RBP25.33■■□□□ 1.65
LCE1C-201ENST00000606576 CFAP65Q6ZU64 1925 aaKnown RBP25.33■■□□□ 1.65
LCE1C-201ENST00000606576 ERVK-7P63135 1459 aa25.3■■□□□ 1.64
LCE1C-201ENST00000606576 SPATA31D1Q6ZQQ2 1576 aa25.3■■□□□ 1.64
LCE1C-201ENST00000606576 KANK1Q14678 1352 aa25.3■■□□□ 1.64
LCE1C-201ENST00000606576 A2ML1A8K2U0 1454 aa25.29■■□□□ 1.64
LCE1C-201ENST00000606576 ARHGAP31Q2M1Z3 1444 aa25.29■■□□□ 1.64
LCE1C-201ENST00000606576 LMTK2Q8IWU2 1503 aa25.28■■□□□ 1.64
LCE1C-201ENST00000606576 UNC13BO14795 1591 aa25.24■■□□□ 1.63
LCE1C-201ENST00000606576 NCKAP5LQ9HCH0 1330 aa25.23■■□□□ 1.63
LCE1C-201ENST00000606576 NLRP1Q9C000 1473 aa25.22■■□□□ 1.63
LCE1C-201ENST00000606576 EFCAB6Q5THR3 1501 aa25.21■■□□□ 1.63
LCE1C-201ENST00000606576 NAIPQ13075 1403 aa25.19■■□□□ 1.62
LCE1C-201ENST00000606576 PLA2R1Q13018 1463 aa25.18■■□□□ 1.62
LCE1C-201ENST00000606576 UGGT1Q9NYU2 1555 aa25.18■■□□□ 1.62
LCE1C-201ENST00000606576 PTPRTO14522 1441 aa25.16■■□□□ 1.62
LCE1C-201ENST00000606576 DMRT2Q9Y5R5 561 aa25.15■■□□□ 1.62
LCE1C-201ENST00000606576 TET3O43151 1660 aa25.15■■□□□ 1.62
LCE1C-201ENST00000606576 SYNMO15061 1565 aa25.14■■□□□ 1.62
LCE1C-201ENST00000606576 NOS1P29475 1434 aa25.14■■□□□ 1.62
LCE1C-201ENST00000606576 IQGAP3Q86VI3 1631 aa25.14■■□□□ 1.61
LCE1C-201ENST00000606576 NUP155O75694 1391 aa25.14■■□□□ 1.61
LCE1C-201ENST00000606576 GCC2Q8IWJ2 1684 aa25.13■■□□□ 1.61
LCE1C-201ENST00000606576 PKD2Q13563 968 aa25.12■■□□□ 1.61
LCE1C-201ENST00000606576 THEMISQ8N1K5 641 aaPredicted RBP25.12■■□□□ 1.61
LCE1C-201ENST00000606576 UBR1Q8IWV7 1749 aa25.11■■□□□ 1.61
LCE1C-201ENST00000606576 HFM1A2PYH4 1435 aa25.11■■□□□ 1.61
LCE1C-201ENST00000606576 E9PCH4 1651 aa25.1■■□□□ 1.61
LCE1C-201ENST00000606576 PIK3C2BO00750 1634 aa25.09■■□□□ 1.61
LCE1C-201ENST00000606576 IDI1Q13907 227 aa25.09■■□□□ 1.61
LCE1C-201ENST00000606576 RPRD2Q5VT52 1461 aaKnown RBP25.09■■□□□ 1.61
LCE1C-201ENST00000606576 NEURL4Q96JN8 1562 aa25.08■■□□□ 1.61
LCE1C-201ENST00000606576 POLR1AO95602 1720 aaPredicted RBP25.06■■□□□ 1.6
LCE1C-201ENST00000606576 ANKLE2Q86XL3 938 aa25.04■■□□□ 1.6
LCE1C-201ENST00000606576 LTKP29376 864 aa25■■□□□ 1.59
LCE1C-201ENST00000606576 ARHGAP23Q9P227 1491 aa25■■□□□ 1.59
LCE1C-201ENST00000606576 ILDR1Q86SU0 546 aaPredicted RBP24.99■■□□□ 1.59
LCE1C-201ENST00000606576 LTBP4Q8N2S1 1624 aa24.99■■□□□ 1.59
LCE1C-201ENST00000606576 CERKQ8TCT0 537 aa24.99■■□□□ 1.59
LCE1C-201ENST00000606576 ZNF335Q9H4Z2 1342 aaPredicted RBP24.99■■□□□ 1.59
LCE1C-201ENST00000606576 SLIT1O75093 1534 aa24.98■■□□□ 1.59
LCE1C-201ENST00000606576 MED14O60244 1454 aa24.98■■□□□ 1.59
LCE1C-201ENST00000606576 SLC52A1Q9NWF4 448 aa24.98■■□□□ 1.59
LCE1C-201ENST00000606576 STAG3Q9UJ98 1225 aa24.97■■□□□ 1.59
LCE1C-201ENST00000606576 ADGRB3O60242 1522 aa24.96■■□□□ 1.59
LCE1C-201ENST00000606576 NPHP4O75161 1426 aaPredicted RBP24.96■■□□□ 1.59
LCE1C-201ENST00000606576 TRIM52Q96A61 297 aa24.96■■□□□ 1.59
LCE1C-201ENST00000606576 KDM5AP29375 1690 aaKnown RBP24.96■■□□□ 1.59
LCE1C-201ENST00000606576 TMEM2Q9UHN6 1383 aa24.95■■□□□ 1.59
LCE1C-201ENST00000606576 MYO5BQ9ULV0 1848 aa24.94■■□□□ 1.58
LCE1C-201ENST00000606576 TXNDC2Q86VQ3 553 aa24.94■■□□□ 1.58
LCE1C-201ENST00000606576 SCAF11Q99590 1463 aaKnown RBP24.94■■□□□ 1.58
LCE1C-201ENST00000606576 IQGAP1P46940 1657 aa24.92■■□□□ 1.58
LCE1C-201ENST00000606576 TMEM131LA2VDJ0 1609 aa24.92■■□□□ 1.58
LCE1C-201ENST00000606576 SPHKAPQ2M3C7 1700 aa24.9■■□□□ 1.58
LCE1C-201ENST00000606576 FBXO41Q8TF61 875 aa24.88■■□□□ 1.57
LCE1C-201ENST00000606576 CHGAP10645 457 aaKnown RBP24.87■■□□□ 1.57
LCE1C-201ENST00000606576 EID1Q9Y6B2 187 aa24.87■■□□□ 1.57
LCE1C-201ENST00000606576 SETD5Q9C0A6 1442 aa24.86■■□□□ 1.57
LCE1C-201ENST00000606576 SLC4A1APQ9BWU0 796 aaKnown RBP24.86■■□□□ 1.57
LCE1C-201ENST00000606576 ZFYVE9O95405 1425 aa24.85■■□□□ 1.57
LCE1C-201ENST00000606576 FOXD1Q16676 465 aa24.83■■□□□ 1.57
LCE1C-201ENST00000606576 CLTCL1P53675 1640 aa24.83■■□□□ 1.56
LCE1C-201ENST00000606576 RIMS2Q9UQ26 1411 aa24.81■■□□□ 1.56
LCE1C-201ENST00000606576 STRCP1A6NGW2 1772 aa24.81■■□□□ 1.56
LCE1C-201ENST00000606576 SENP3Q9H4L4 574 aaPredicted RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms