RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 MED1Q15648 1581 aaPredicted RBP21.65■■□□□ 1.06
CTSA-212ENST00000606394 SHANK2Q9UPX8 1470 aa21.64■■□□□ 1.06
CTSA-212ENST00000606394 TNRQ92752 1358 aa21.64■■□□□ 1.06
CTSA-212ENST00000606394 NEURL4Q96JN8 1562 aa21.63■■□□□ 1.05
CTSA-212ENST00000606394 PZPP20742 1482 aa21.63■■□□□ 1.05
CTSA-212ENST00000606394 SCAF1Q9H7N4 1312 aaKnown RBP21.62■■□□□ 1.05
CTSA-212ENST00000606394 PIP4K2BP78356 416 aa21.61■■□□□ 1.05
CTSA-212ENST00000606394 TIAM1Q13009 1591 aa21.61■■□□□ 1.05
CTSA-212ENST00000606394 KDM5DQ9BY66 1539 aa21.6■■□□□ 1.05
CTSA-212ENST00000606394 ZNF644Q9H582 1327 aaPredicted RBP21.6■■□□□ 1.05
CTSA-212ENST00000606394 ANKLE2Q86XL3 938 aa21.6■■□□□ 1.05
CTSA-212ENST00000606394 THEMISQ8N1K5 641 aaPredicted RBP21.59■■□□□ 1.05
CTSA-212ENST00000606394 FBXO31Q5XUX0 539 aaPredicted RBP21.58■■□□□ 1.05
CTSA-212ENST00000606394 MED14O60244 1454 aa21.58■■□□□ 1.04
CTSA-212ENST00000606394 NLRP1Q9C000 1473 aa21.58■■□□□ 1.04
CTSA-212ENST00000606394 EHBP1L1Q8N3D4 1523 aa21.57■■□□□ 1.04
CTSA-212ENST00000606394 KIF3BO15066 747 aa21.57■■□□□ 1.04
CTSA-212ENST00000606394 RSPH4AQ5TD94 716 aa21.57■■□□□ 1.04
CTSA-212ENST00000606394 CEP162Q5TB80 1403 aa21.56■■□□□ 1.04
CTSA-212ENST00000606394 DEPDC5O75140 1603 aa21.56■■□□□ 1.04
CTSA-212ENST00000606394 VWDEQ8N2E2 1590 aa21.56■■□□□ 1.04
CTSA-212ENST00000606394 WASHC2CQ9Y4E1 1318 aa21.55■■□□□ 1.04
CTSA-212ENST00000606394 MIA2Q96PC5 1412 aa21.55■■□□□ 1.04
CTSA-212ENST00000606394 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.55■■□□□ 1.04
CTSA-212ENST00000606394 CCDC141Q6ZP82 1450 aa21.54■■□□□ 1.04
CTSA-212ENST00000606394 UGGT1Q9NYU2 1555 aa21.53■■□□□ 1.04
CTSA-212ENST00000606394 NPHP4O75161 1426 aaPredicted RBP21.52■■□□□ 1.04
CTSA-212ENST00000606394 PHF23Q9BUL5 403 aaPredicted RBP21.5■■□□□ 1.03
CTSA-212ENST00000606394 ALKQ9UM73 1620 aa21.49■■□□□ 1.03
CTSA-212ENST00000606394 IQGAP1P46940 1657 aa21.47■■□□□ 1.03
CTSA-212ENST00000606394 CAMSAP2Q08AD1 1489 aa21.46■■□□□ 1.03
CTSA-212ENST00000606394 SYNMO15061 1565 aa21.44■■□□□ 1.02
CTSA-212ENST00000606394 ARHGEF5Q12774 1597 aa21.44■■□□□ 1.02
CTSA-212ENST00000606394 TSPY4P0CV99 314 aa21.43■■□□□ 1.02
CTSA-212ENST00000606394 TSPY10P0CW01 314 aa21.43■■□□□ 1.02
CTSA-212ENST00000606394 LRRC7Q96NW7 1537 aa21.43■■□□□ 1.02
CTSA-212ENST00000606394 RNF17Q9BXT8 1623 aaKnown RBP21.42■■□□□ 1.02
CTSA-212ENST00000606394 ZC3H13Q5T200 1668 aaKnown RBP21.41■■□□□ 1.02
CTSA-212ENST00000606394 NCOA2Q15596 1464 aa21.41■■□□□ 1.02
CTSA-212ENST00000606394 ABCC3O15438 1527 aa21.38■■□□□ 1.01
CTSA-212ENST00000606394 STRCP1A6NGW2 1772 aa21.38■■□□□ 1.01
CTSA-212ENST00000606394 ERVK-7P63135 1459 aa21.36■■□□□ 1.01
CTSA-212ENST00000606394 EIF2AK4Q9P2K8 1649 aaKnown RBP21.35■■□□□ 1.01
CTSA-212ENST00000606394 MAST1Q9Y2H9 1570 aa21.34■■□□□ 1.01
CTSA-212ENST00000606394 SCAF11Q99590 1463 aaKnown RBP21.32■■□□□ 1
CTSA-212ENST00000606394 UBR1Q8IWV7 1749 aa21.31■■□□□ 1
CTSA-212ENST00000606394 ARHGAP23Q9P227 1491 aa21.29■■□□□ 1
CTSA-212ENST00000606394 SLIT1O75093 1534 aa21.29■■□□□ 1
CTSA-212ENST00000606394 MROH1Q8NDA8 1641 aa21.28■■□□□ 1
CTSA-212ENST00000606394 RGS17Q9UGC6 210 aaPredicted RBP21.26■□□□□ 0.99
CTSA-212ENST00000606394 ARHGAP31Q2M1Z3 1444 aa21.26■□□□□ 0.99
CTSA-212ENST00000606394 FAM135BQ49AJ0 1406 aa21.25■□□□□ 0.99
CTSA-212ENST00000606394 TXNDC2Q86VQ3 553 aa21.25■□□□□ 0.99
CTSA-212ENST00000606394 SENP3Q9H4L4 574 aaPredicted RBP21.25■□□□□ 0.99
CTSA-212ENST00000606394 LTKP29376 864 aa21.24■□□□□ 0.99
CTSA-212ENST00000606394 EID1Q9Y6B2 187 aa21.24■□□□□ 0.99
CTSA-212ENST00000606394 DUOX2Q9NRD8 1548 aa21.23■□□□□ 0.99
CTSA-212ENST00000606394 CEP152O94986 1710 aa21.22■□□□□ 0.99
CTSA-212ENST00000606394 XIRP1Q702N8 1843 aaKnown RBP21.22■□□□□ 0.99
CTSA-212ENST00000606394 LRRC9Q6ZRR7 1453 aa21.21■□□□□ 0.99
CTSA-212ENST00000606394 CFAP65Q6ZU64 1925 aaKnown RBP21.21■□□□□ 0.99
CTSA-212ENST00000606394 PRDM15P57071 1507 aaPredicted RBP21.19■□□□□ 0.98
CTSA-212ENST00000606394 MYOM3Q5VTT5 1437 aa21.19■□□□□ 0.98
CTSA-212ENST00000606394 TMEM2Q9UHN6 1383 aa21.18■□□□□ 0.98
CTSA-212ENST00000606394 KDM5AP29375 1690 aaKnown RBP21.16■□□□□ 0.98
CTSA-212ENST00000606394 ERBINQ96RT1 1412 aa21.16■□□□□ 0.98
CTSA-212ENST00000606394 TMEM94Q12767 1356 aa21.14■□□□□ 0.98
CTSA-212ENST00000606394 MAP3K1Q13233 1512 aa21.14■□□□□ 0.97
CTSA-212ENST00000606394 KIF15Q9NS87 1388 aa21.13■□□□□ 0.97
CTSA-212ENST00000606394 KCNA6P17658 529 aa21.13■□□□□ 0.97
CTSA-212ENST00000606394 VPS8Q8N3P4 1428 aa21.12■□□□□ 0.97
CTSA-212ENST00000606394 PIK3C2BO00750 1634 aa21.12■□□□□ 0.97
CTSA-212ENST00000606394 EFCAB6Q5THR3 1501 aa21.11■□□□□ 0.97
CTSA-212ENST00000606394 POTEAQ6S8J7 498 aa21.11■□□□□ 0.97
CTSA-212ENST00000606394 STAG3Q9UJ98 1225 aa21.11■□□□□ 0.97
CTSA-212ENST00000606394 KANK1Q14678 1352 aa21.1■□□□□ 0.97
CTSA-212ENST00000606394 ROBO1Q9Y6N7 1651 aa21.09■□□□□ 0.97
CTSA-212ENST00000606394 TET3O43151 1660 aa21.09■□□□□ 0.97
CTSA-212ENST00000606394 NKTRP30414 1462 aaKnown RBP21.08■□□□□ 0.97
CTSA-212ENST00000606394 PROSER2Q86WR7 435 aaPredicted RBP21.07■□□□□ 0.96
CTSA-212ENST00000606394 LMTK2Q8IWU2 1503 aa21.07■□□□□ 0.96
CTSA-212ENST00000606394 IDI1Q13907 227 aa21.06■□□□□ 0.96
CTSA-212ENST00000606394 KANK4Q5T7N3 995 aaPredicted RBP21.05■□□□□ 0.96
CTSA-212ENST00000606394 CROCC2H7BZ55 1655 aa21.05■□□□□ 0.96
CTSA-212ENST00000606394 ABCC5O15440 1437 aa21.04■□□□□ 0.96
CTSA-212ENST00000606394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.04■□□□□ 0.968e-7■□□□□ 9.4
CTSA-212ENST00000606394 RRP7BPQ9NSQ0 103 aa21.04■□□□□ 0.96
CTSA-212ENST00000606394 NWD1Q149M9 1564 aa21.04■□□□□ 0.96
CTSA-212ENST00000606394 MSH6P52701 1360 aa21.03■□□□□ 0.96
CTSA-212ENST00000606394 SLC26A8Q96RN1 970 aa21.03■□□□□ 0.96
CTSA-212ENST00000606394 JCADQ9P266 1359 aa21.01■□□□□ 0.95
CTSA-212ENST00000606394 SLC52A1Q9NWF4 448 aa21.01■□□□□ 0.95
CTSA-212ENST00000606394 ADGRB3O60242 1522 aa21■□□□□ 0.95
CTSA-212ENST00000606394 SLAIN2Q9P270 581 aa21■□□□□ 0.95
CTSA-212ENST00000606394 NOS1P29475 1434 aa21■□□□□ 0.95
CTSA-212ENST00000606394 DAPK1P53355 1430 aa20.98■□□□□ 0.95
CTSA-212ENST00000606394 PTPN23Q9H3S7 1636 aa20.97■□□□□ 0.95
CTSA-212ENST00000606394 PHLPP1O60346 1717 aa20.97■□□□□ 0.95
CTSA-212ENST00000606394 ANKRD30AQ9BXX3 1397 aa20.97■□□□□ 0.95
CTSA-212ENST00000606394 RBM33Q96EV2 1170 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms