RNA–Protein interactions for RNA: ENST00000606055.1

LINC00458-204, long intergenic non-protein coding RNA 458, humanhuman

TSL 3

Gene LINC00458, Length 425 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-204ENST00000606055 CLTCQ00610 1675 aaKnown RBP10.82□□□□□ -0.68
LINC00458-204ENST00000606055 KIF15Q9NS87 1388 aa10.82□□□□□ -0.68
LINC00458-204ENST00000606055 ESF1Q9H501 851 aaKnown RBP10.82□□□□□ -0.68
LINC00458-204ENST00000606055 PPP6R1Q9UPN7 881 aa10.82□□□□□ -0.68
LINC00458-204ENST00000606055 EIF2AK4Q9P2K8 1649 aaKnown RBP10.82□□□□□ -0.68
LINC00458-204ENST00000606055 FAM135AQ9P2D6 1515 aa10.82□□□□□ -0.68
LINC00458-204ENST00000606055 C3P01024 1663 aa10.82□□□□□ -0.68
LINC00458-204ENST00000606055 CFAP65Q6ZU64 1925 aaKnown RBP10.82□□□□□ -0.68
LINC00458-204ENST00000606055 NAIPQ13075 1403 aa10.8□□□□□ -0.68
LINC00458-204ENST00000606055 ANKRD50Q9ULJ7 1429 aa10.79□□□□□ -0.68
LINC00458-204ENST00000606055 PREX1Q8TCU6 1659 aa10.79□□□□□ -0.68
LINC00458-204ENST00000606055 CNTLNQ9NXG0 1405 aa10.78□□□□□ -0.68
LINC00458-204ENST00000606055 RNF17Q9BXT8 1623 aaKnown RBP10.78□□□□□ -0.68
LINC00458-204ENST00000606055 PLPPR3Q6T4P5 718 aa10.78□□□□□ -0.68
LINC00458-204ENST00000606055 GCC2Q8IWJ2 1684 aa10.78□□□□□ -0.68
LINC00458-204ENST00000606055 SETD5Q9C0A6 1442 aa10.77□□□□□ -0.68
LINC00458-204ENST00000606055 ZC3H13Q5T200 1668 aaKnown RBP10.77□□□□□ -0.69
LINC00458-204ENST00000606055 GGT6Q6P531 493 aa10.77□□□□□ -0.69
LINC00458-204ENST00000606055 CEP152O94986 1710 aa10.77□□□□□ -0.69
LINC00458-204ENST00000606055 KIF3BO15066 747 aa10.76□□□□□ -0.69
LINC00458-204ENST00000606055 CHIC2Q9UKJ5 165 aa10.75□□□□□ -0.69
LINC00458-204ENST00000606055 KDM5DQ9BY66 1539 aa10.74□□□□□ -0.69
LINC00458-204ENST00000606055 RRP7BPQ9NSQ0 103 aa10.74□□□□□ -0.69
LINC00458-204ENST00000606055 DEPDC5O75140 1603 aa10.73□□□□□ -0.69
LINC00458-204ENST00000606055 LMTK3Q96Q04 1460 aa10.73□□□□□ -0.69
LINC00458-204ENST00000606055 PRDM15P57071 1507 aaPredicted RBP10.73□□□□□ -0.69
LINC00458-204ENST00000606055 ITGAEP38570 1179 aa10.72□□□□□ -0.69
LINC00458-204ENST00000606055 LMTK2Q8IWU2 1503 aa10.72□□□□□ -0.69
LINC00458-204ENST00000606055 UNC13BO14795 1591 aa10.72□□□□□ -0.69
LINC00458-204ENST00000606055 VWDEQ8N2E2 1590 aa10.72□□□□□ -0.69
LINC00458-204ENST00000606055 CAMSAP1Q5T5Y3 1602 aa10.72□□□□□ -0.69
LINC00458-204ENST00000606055 CEBPAP49715 358 aaPredicted RBP10.71□□□□□ -0.69
LINC00458-204ENST00000606055 MROH1Q8NDA8 1641 aa10.71□□□□□ -0.69
LINC00458-204ENST00000606055 ZMYM3Q14202 1370 aa10.7□□□□□ -0.7
LINC00458-204ENST00000606055 KANK1Q14678 1352 aa10.7□□□□□ -0.7
LINC00458-204ENST00000606055 RAB3GAP2Q9H2M9 1393 aa10.69□□□□□ -0.7
LINC00458-204ENST00000606055 WASHC2CQ9Y4E1 1318 aa10.69□□□□□ -0.7
LINC00458-204ENST00000606055 ZNF142P52746 1687 aaPredicted RBP10.69□□□□□ -0.7
LINC00458-204ENST00000606055 MYO3AQ8NEV4 1616 aa10.69□□□□□ -0.7
LINC00458-204ENST00000606055 ABCC3O15438 1527 aa10.68□□□□□ -0.7
LINC00458-204ENST00000606055 NPATQ14207 1427 aa10.68□□□□□ -0.7
LINC00458-204ENST00000606055 ARHGAP31Q2M1Z3 1444 aa10.68□□□□□ -0.7
LINC00458-204ENST00000606055 UHRF1BP1Q6BDS2 1440 aa10.68□□□□□ -0.7
LINC00458-204ENST00000606055 SOCS7O14512 581 aa10.68□□□□□ -0.7
LINC00458-204ENST00000606055 RPRD2Q5VT52 1461 aaKnown RBP10.68□□□□□ -0.7
LINC00458-204ENST00000606055 IQGAP3Q86VI3 1631 aa10.67□□□□□ -0.7
LINC00458-204ENST00000606055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.66□□□□□ -0.7
LINC00458-204ENST00000606055 PCGF6Q9BYE7 350 aa10.66□□□□□ -0.7
LINC00458-204ENST00000606055 PZPP20742 1482 aa10.66□□□□□ -0.7
LINC00458-204ENST00000606055 TET3O43151 1660 aa10.65□□□□□ -0.7
LINC00458-204ENST00000606055 NUP155O75694 1391 aa10.65□□□□□ -0.71
LINC00458-204ENST00000606055 CLSPNQ9HAW4 1339 aa10.64□□□□□ -0.71
LINC00458-204ENST00000606055 CEP170BQ9Y4F5 1589 aaPredicted RBP10.64□□□□□ -0.71
LINC00458-204ENST00000606055 STRCQ7RTU9 1775 aa10.62□□□□□ -0.71
LINC00458-204ENST00000606055 POLR1AO95602 1720 aaPredicted RBP10.62□□□□□ -0.71
LINC00458-204ENST00000606055 SPATA31D1Q6ZQQ2 1576 aa10.62□□□□□ -0.71
LINC00458-204ENST00000606055 EFCAB6Q5THR3 1501 aa10.62□□□□□ -0.71
LINC00458-204ENST00000606055 TNRQ92752 1358 aa10.62□□□□□ -0.71
LINC00458-204ENST00000606055 ERVK-7P63135 1459 aa10.61□□□□□ -0.71
LINC00458-204ENST00000606055 E9PCH4 1651 aa10.6□□□□□ -0.71
LINC00458-204ENST00000606055 HSPA2P54652 639 aa10.6□□□□□ -0.71
LINC00458-204ENST00000606055 MPHOSPH9Q99550 1183 aa10.6□□□□□ -0.71
LINC00458-204ENST00000606055 A2ML1A8K2U0 1454 aa10.6□□□□□ -0.71
LINC00458-204ENST00000606055 PTPRTO14522 1441 aa10.59□□□□□ -0.71
LINC00458-204ENST00000606055 MYO5BQ9ULV0 1848 aa10.59□□□□□ -0.71
LINC00458-204ENST00000606055 FBXO31Q5XUX0 539 aaPredicted RBP10.59□□□□□ -0.71
LINC00458-204ENST00000606055 SLC4A1APQ9BWU0 796 aaKnown RBP10.59□□□□□ -0.71
LINC00458-204ENST00000606055 NLRP1Q9C000 1473 aa10.59□□□□□ -0.71
LINC00458-204ENST00000606055 NOS1P29475 1434 aa10.58□□□□□ -0.72
LINC00458-204ENST00000606055 UBR1Q8IWV7 1749 aa10.58□□□□□ -0.72
LINC00458-204ENST00000606055 ILDR2Q71H61 639 aa10.58□□□□□ -0.72
LINC00458-204ENST00000606055 TRIM52Q96A61 297 aa10.58□□□□□ -0.72
LINC00458-204ENST00000606055 SPHKAPQ2M3C7 1700 aa10.58□□□□□ -0.72
LINC00458-204ENST00000606055 PIK3C2BO00750 1634 aa10.57□□□□□ -0.72
LINC00458-204ENST00000606055 KDM5AP29375 1690 aaKnown RBP10.57□□□□□ -0.72
LINC00458-204ENST00000606055 NEURL4Q96JN8 1562 aa10.56□□□□□ -0.72
LINC00458-204ENST00000606055 UGGT1Q9NYU2 1555 aa10.56□□□□□ -0.72
LINC00458-204ENST00000606055 DHX57Q6P158 1386 aaKnown RBP10.56□□□□□ -0.72
LINC00458-204ENST00000606055 ANKRD30BQ9BXX2 1392 aa10.55□□□□□ -0.72
LINC00458-204ENST00000606055 PKD2Q13563 968 aa10.55□□□□□ -0.72
LINC00458-204ENST00000606055 SLC52A1Q9NWF4 448 aa10.55□□□□□ -0.72
LINC00458-204ENST00000606055 KIF1BO60333 1816 aa10.55□□□□□ -0.72
LINC00458-204ENST00000606055 SYNMO15061 1565 aa10.55□□□□□ -0.72
LINC00458-204ENST00000606055 PLA2R1Q13018 1463 aa10.55□□□□□ -0.72
LINC00458-204ENST00000606055 TRPM2O94759 1503 aa10.54□□□□□ -0.72
LINC00458-204ENST00000606055 DISP3Q9P2K9 1392 aa10.53□□□□□ -0.72
LINC00458-204ENST00000606055 STAC3Q96MF2 364 aa10.53□□□□□ -0.72
LINC00458-204ENST00000606055 DMRT2Q9Y5R5 561 aa10.53□□□□□ -0.72
LINC00458-204ENST00000606055 THEMISQ8N1K5 641 aaPredicted RBP10.52□□□□□ -0.73
LINC00458-204ENST00000606055 STAG3Q9UJ98 1225 aa10.52□□□□□ -0.73
LINC00458-204ENST00000606055 TIMELESSQ9UNS1 1208 aa10.52□□□□□ -0.73
LINC00458-204ENST00000606055 ADGRB3O60242 1522 aa10.51□□□□□ -0.73
LINC00458-204ENST00000606055 IQGAP1P46940 1657 aa10.5□□□□□ -0.73
LINC00458-204ENST00000606055 CCDC144AA2RUR9 1427 aa10.5□□□□□ -0.73
LINC00458-204ENST00000606055 NCKAP5LQ9HCH0 1330 aa10.49□□□□□ -0.73
LINC00458-204ENST00000606055 TMEM131LA2VDJ0 1609 aa10.48□□□□□ -0.73
LINC00458-204ENST00000606055 ANKLE2Q86XL3 938 aa10.48□□□□□ -0.73
LINC00458-204ENST00000606055 SLIT1O75093 1534 aa10.48□□□□□ -0.73
LINC00458-204ENST00000606055 IDI1Q13907 227 aa10.47□□□□□ -0.73
LINC00458-204ENST00000606055 RPGRIP1LQ68CZ1 1315 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms