RNA–Protein interactions for RNA: ENST00000603334.1

DDX55P1-201, Transcript of DEAD-box helicase 55 pseudogene 1, humanhuman

BASIC

Gene DDX55P1, Length 1,414 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55P1-201ENST00000603334 DHX29Q7Z478 1369 aaKnown RBP15.4■□□□□ 0.06
DDX55P1-201ENST00000603334 HSPA2P54652 639 aa15.4■□□□□ 0.06
DDX55P1-201ENST00000603334 CNTLNQ9NXG0 1405 aa15.39■□□□□ 0.05
DDX55P1-201ENST00000603334 ABCC5O15440 1437 aa15.39■□□□□ 0.05
DDX55P1-201ENST00000603334 DAPK1P53355 1430 aa15.38■□□□□ 0.05
DDX55P1-201ENST00000603334 DNMT1P26358 1616 aaKnown RBP15.35■□□□□ 0.05
DDX55P1-201ENST00000603334 ZMYM3Q14202 1370 aa15.35■□□□□ 0.05
DDX55P1-201ENST00000603334 RNF17Q9BXT8 1623 aaKnown RBP15.35■□□□□ 0.05
DDX55P1-201ENST00000603334 MROH1Q8NDA8 1641 aa15.34■□□□□ 0.05
DDX55P1-201ENST00000603334 UHRF1BP1Q6BDS2 1440 aa15.34■□□□□ 0.05
DDX55P1-201ENST00000603334 CCER1Q8TC90 406 aaPredicted RBP15.34■□□□□ 0.05
DDX55P1-201ENST00000603334 MYO3AQ8NEV4 1616 aa15.33■□□□□ 0.04
DDX55P1-201ENST00000603334 ANKRD30AQ9BXX3 1397 aa15.33■□□□□ 0.04
DDX55P1-201ENST00000603334 ZNF142P52746 1687 aaPredicted RBP15.33■□□□□ 0.04
DDX55P1-201ENST00000603334 NPATQ14207 1427 aa15.33■□□□□ 0.04
DDX55P1-201ENST00000603334 EIF2AK4Q9P2K8 1649 aaKnown RBP15.33■□□□□ 0.04
DDX55P1-201ENST00000603334 PTPRKQ15262 1439 aa15.32■□□□□ 0.04
DDX55P1-201ENST00000603334 GGT6Q6P531 493 aa15.32■□□□□ 0.04
DDX55P1-201ENST00000603334 FAM135AQ9P2D6 1515 aa15.31■□□□□ 0.04
DDX55P1-201ENST00000603334 ESF1Q9H501 851 aaKnown RBP15.31■□□□□ 0.04
DDX55P1-201ENST00000603334 ADGRL2O95490 1459 aa15.31■□□□□ 0.04
DDX55P1-201ENST00000603334 KDM5DQ9BY66 1539 aa15.31■□□□□ 0.04
DDX55P1-201ENST00000603334 DUOX2Q9NRD8 1548 aa15.31■□□□□ 0.04
DDX55P1-201ENST00000603334 KIF15Q9NS87 1388 aa15.3■□□□□ 0.04
DDX55P1-201ENST00000603334 NCOA1Q15788 1441 aa15.3■□□□□ 0.04
DDX55P1-201ENST00000603334 ROCK1Q13464 1354 aa15.29■□□□□ 0.04
DDX55P1-201ENST00000603334 ERBINQ96RT1 1412 aa15.29■□□□□ 0.04
DDX55P1-201ENST00000603334 KIF3BO15066 747 aa15.28■□□□□ 0.04
DDX55P1-201ENST00000603334 HRCP23327 699 aa15.28■□□□□ 0.04
DDX55P1-201ENST00000603334 CHIC2Q9UKJ5 165 aa15.27■□□□□ 0.04
DDX55P1-201ENST00000603334 ZC3H13Q5T200 1668 aaKnown RBP15.27■□□□□ 0.03
DDX55P1-201ENST00000603334 ILDR1Q86SU0 546 aaPredicted RBP15.26■□□□□ 0.03
DDX55P1-201ENST00000603334 RRP7BPQ9NSQ0 103 aa15.26■□□□□ 0.03
DDX55P1-201ENST00000603334 CEP152O94986 1710 aa15.26■□□□□ 0.03
DDX55P1-201ENST00000603334 CEP170BQ9Y4F5 1589 aaPredicted RBP15.26■□□□□ 0.03
DDX55P1-201ENST00000603334 PZPP20742 1482 aa15.26■□□□□ 0.03
DDX55P1-201ENST00000603334 ABCC3O15438 1527 aa15.25■□□□□ 0.03
DDX55P1-201ENST00000603334 DEPDC5O75140 1603 aa15.25■□□□□ 0.03
DDX55P1-201ENST00000603334 CAMSAP1Q5T5Y3 1602 aa15.25■□□□□ 0.03
DDX55P1-201ENST00000603334 PRDM15P57071 1507 aaPredicted RBP15.24■□□□□ 0.03
DDX55P1-201ENST00000603334 SETD5Q9C0A6 1442 aa15.23■□□□□ 0.03
DDX55P1-201ENST00000603334 ZEB1P37275 1124 aaPredicted RBP15.23■□□□□ 0.03
DDX55P1-201ENST00000603334 WASHC2CQ9Y4E1 1318 aa15.2■□□□□ 0.02
DDX55P1-201ENST00000603334 ANKRD50Q9ULJ7 1429 aa15.2■□□□□ 0.02
DDX55P1-201ENST00000603334 FBXO31Q5XUX0 539 aaPredicted RBP15.2■□□□□ 0.02
DDX55P1-201ENST00000603334 SPATA31D1Q6ZQQ2 1576 aa15.2■□□□□ 0.02
DDX55P1-201ENST00000603334 RAB3GAP2Q9H2M9 1393 aa15.19■□□□□ 0.02
DDX55P1-201ENST00000603334 A2ML1A8K2U0 1454 aa15.19■□□□□ 0.02
DDX55P1-201ENST00000603334 PLA2R1Q13018 1463 aa15.19■□□□□ 0.02
DDX55P1-201ENST00000603334 PTPRTO14522 1441 aa15.19■□□□□ 0.02
DDX55P1-201ENST00000603334 VWDEQ8N2E2 1590 aa15.18■□□□□ 0.02
DDX55P1-201ENST00000603334 KANK1Q14678 1352 aa15.17■□□□□ 0.02
DDX55P1-201ENST00000603334 CFAP65Q6ZU64 1925 aaKnown RBP15.17■□□□□ 0.02
DDX55P1-201ENST00000603334 TNRQ92752 1358 aa15.17■□□□□ 0.02
DDX55P1-201ENST00000603334 POLR1AO95602 1720 aaPredicted RBP15.16■□□□□ 0.02
DDX55P1-201ENST00000603334 LTBP4Q8N2S1 1624 aa15.16■□□□□ 0.02
DDX55P1-201ENST00000603334 NEURL4Q96JN8 1562 aa15.15■□□□□ 0.02
DDX55P1-201ENST00000603334 ERVK-7P63135 1459 aa15.15■□□□□ 0.02
DDX55P1-201ENST00000603334 ARHGAP31Q2M1Z3 1444 aa15.13■□□□□ 0.01
DDX55P1-201ENST00000603334 NLRP1Q9C000 1473 aa15.13■□□□□ 0.01
DDX55P1-201ENST00000603334 ACIN1Q9UKV3 1341 aaKnown RBP15.13■□□□□ 0.01
DDX55P1-201ENST00000603334 LMTK2Q8IWU2 1503 aa15.13■□□□□ 0.01
DDX55P1-201ENST00000603334 HFM1A2PYH4 1435 aa15.12■□□□□ 0.01
DDX55P1-201ENST00000603334 NCKAP5LQ9HCH0 1330 aa15.12■□□□□ 0.01
DDX55P1-201ENST00000603334 UBR1Q8IWV7 1749 aa15.12■□□□□ 0.01
DDX55P1-201ENST00000603334 FBXO41Q8TF61 875 aa15.11■□□□□ 0.01
DDX55P1-201ENST00000603334 TRIM52Q96A61 297 aa15.11■□□□□ 0.01
DDX55P1-201ENST00000603334 DMRT2Q9Y5R5 561 aa15.11■□□□□ 0.01
DDX55P1-201ENST00000603334 UGGT1Q9NYU2 1555 aa15.11■□□□□ 0.01
DDX55P1-201ENST00000603334 NAIPQ13075 1403 aa15.11■□□□□ 0.01
DDX55P1-201ENST00000603334 GCC2Q8IWJ2 1684 aa15.11■□□□□ 0.01
DDX55P1-201ENST00000603334 DHX57Q6P158 1386 aaKnown RBP15.1■□□□□ 0.01
DDX55P1-201ENST00000603334 CERKQ8TCT0 537 aa15.09■□□□□ 0.01
DDX55P1-201ENST00000603334 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.09■□□□□ 0.01
DDX55P1-201ENST00000603334 EFCAB6Q5THR3 1501 aa15.08■□□□□ 0
DDX55P1-201ENST00000603334 UNC13BO14795 1591 aa15.08■□□□□ 0
DDX55P1-201ENST00000603334 SYNMO15061 1565 aa15.07■□□□□ 0
DDX55P1-201ENST00000603334 PKD2Q13563 968 aa15.07■□□□□ 0
DDX55P1-201ENST00000603334 SCAF1Q9H7N4 1312 aaKnown RBP15.07■□□□□ 0
DDX55P1-201ENST00000603334 PIK3C2BO00750 1634 aa15.06■□□□□ 0
DDX55P1-201ENST00000603334 RPRD2Q5VT52 1461 aaKnown RBP15.06■□□□□ 0
DDX55P1-201ENST00000603334 MED14O60244 1454 aa15.04■□□□□ -0
DDX55P1-201ENST00000603334 NUP155O75694 1391 aa15.04■□□□□ -0
DDX55P1-201ENST00000603334 TET3O43151 1660 aa15.04■□□□□ -0
DDX55P1-201ENST00000603334 KDM5AP29375 1690 aaKnown RBP15.04■□□□□ -0
DDX55P1-201ENST00000603334 ZNF335Q9H4Z2 1342 aaPredicted RBP15.03■□□□□ -0
DDX55P1-201ENST00000603334 IQGAP1P46940 1657 aa15.03■□□□□ -0
DDX55P1-201ENST00000603334 NOS1P29475 1434 aa15.03■□□□□ -0
DDX55P1-201ENST00000603334 ARHGAP23Q9P227 1491 aa15.02□□□□□ -0.01
DDX55P1-201ENST00000603334 E9PCH4 1651 aa15.02□□□□□ -0.01
DDX55P1-201ENST00000603334 IQGAP3Q86VI3 1631 aa15.02□□□□□ -0.01
DDX55P1-201ENST00000603334 CLSPNQ9HAW4 1339 aa15.02□□□□□ -0.01
DDX55P1-201ENST00000603334 SLIT1O75093 1534 aa15.01□□□□□ -0.01
DDX55P1-201ENST00000603334 STRCP1A6NGW2 1772 aa15.01□□□□□ -0.01
DDX55P1-201ENST00000603334 IQSEC2Q5JU85 1478 aa15□□□□□ -0.01
DDX55P1-201ENST00000603334 THEMISQ8N1K5 641 aaPredicted RBP15□□□□□ -0.01
DDX55P1-201ENST00000603334 MYO5BQ9ULV0 1848 aa14.99□□□□□ -0.01
DDX55P1-201ENST00000603334 SLC52A1Q9NWF4 448 aa14.99□□□□□ -0.01
DDX55P1-201ENST00000603334 NPHP4O75161 1426 aaPredicted RBP14.98□□□□□ -0.01
DDX55P1-201ENST00000603334 NEUROD1Q13562 356 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms