RNA–Protein interactions for RNA: ENST00000603038.1

CHCHD2P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 3, humanhuman

BASIC

Gene CHCHD2P3, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2P3-201ENST00000603038 CHIC2Q9UKJ5 165 aa24.42■■□□□ 1.5
CHCHD2P3-201ENST00000603038 DAPK1P53355 1430 aa24.4■■□□□ 1.5
CHCHD2P3-201ENST00000603038 PPARGC1BQ86YN6 1023 aaKnown RBP24.39■■□□□ 1.49
CHCHD2P3-201ENST00000603038 DMRT2Q9Y5R5 561 aa24.39■■□□□ 1.49
CHCHD2P3-201ENST00000603038 NCKAP5LQ9HCH0 1330 aa24.38■■□□□ 1.49
CHCHD2P3-201ENST00000603038 FBXO41Q8TF61 875 aa24.38■■□□□ 1.49
CHCHD2P3-201ENST00000603038 KDM5DQ9BY66 1539 aa24.38■■□□□ 1.49
CHCHD2P3-201ENST00000603038 NCOA1Q15788 1441 aa24.37■■□□□ 1.49
CHCHD2P3-201ENST00000603038 KIF15Q9NS87 1388 aa24.37■■□□□ 1.49
CHCHD2P3-201ENST00000603038 CAMSAP1Q5T5Y3 1602 aa24.36■■□□□ 1.49
CHCHD2P3-201ENST00000603038 MYO3AQ8NEV4 1616 aa24.36■■□□□ 1.49
CHCHD2P3-201ENST00000603038 FAM50AQ14320 339 aaKnown RBP24.36■■□□□ 1.49
CHCHD2P3-201ENST00000603038 CROCC2H7BZ55 1655 aa24.36■■□□□ 1.49
CHCHD2P3-201ENST00000603038 DUOX2Q9NRD8 1548 aa24.35■■□□□ 1.49
CHCHD2P3-201ENST00000603038 DNMT1P26358 1616 aaKnown RBP24.35■■□□□ 1.49
CHCHD2P3-201ENST00000603038 CERKQ8TCT0 537 aa24.35■■□□□ 1.49
CHCHD2P3-201ENST00000603038 PZPP20742 1482 aa24.34■■□□□ 1.49
CHCHD2P3-201ENST00000603038 SHANK2Q9UPX8 1470 aa24.34■■□□□ 1.49
CHCHD2P3-201ENST00000603038 RNF17Q9BXT8 1623 aaKnown RBP24.34■■□□□ 1.49
CHCHD2P3-201ENST00000603038 TNRQ92752 1358 aa24.33■■□□□ 1.49
CHCHD2P3-201ENST00000603038 MROH1Q8NDA8 1641 aa24.33■■□□□ 1.49
CHCHD2P3-201ENST00000603038 PTPRTO14522 1441 aa24.32■■□□□ 1.48
CHCHD2P3-201ENST00000603038 CEP170BQ9Y4F5 1589 aaPredicted RBP24.32■■□□□ 1.48
CHCHD2P3-201ENST00000603038 EIF2AK4Q9P2K8 1649 aaKnown RBP24.31■■□□□ 1.48
CHCHD2P3-201ENST00000603038 ABCC3O15438 1527 aa24.3■■□□□ 1.48
CHCHD2P3-201ENST00000603038 FAM135AQ9P2D6 1515 aa24.3■■□□□ 1.48
CHCHD2P3-201ENST00000603038 CFAP65Q6ZU64 1925 aaKnown RBP24.3■■□□□ 1.48
CHCHD2P3-201ENST00000603038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.3■■□□□ 1.48
CHCHD2P3-201ENST00000603038 ZNF142P52746 1687 aaPredicted RBP24.3■■□□□ 1.48
CHCHD2P3-201ENST00000603038 A2ML1A8K2U0 1454 aa24.29■■□□□ 1.48
CHCHD2P3-201ENST00000603038 ANKRD30AQ9BXX3 1397 aa24.28■■□□□ 1.48
CHCHD2P3-201ENST00000603038 CEP152O94986 1710 aa24.26■■□□□ 1.47
CHCHD2P3-201ENST00000603038 ERBINQ96RT1 1412 aa24.25■■□□□ 1.47
CHCHD2P3-201ENST00000603038 PKD2Q13563 968 aa24.23■■□□□ 1.47
CHCHD2P3-201ENST00000603038 PLA2R1Q13018 1463 aa24.23■■□□□ 1.47
CHCHD2P3-201ENST00000603038 ZC3H13Q5T200 1668 aaKnown RBP24.21■■□□□ 1.47
CHCHD2P3-201ENST00000603038 ADGRL2O95490 1459 aa24.19■■□□□ 1.46
CHCHD2P3-201ENST00000603038 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.19■■□□□ 1.46
CHCHD2P3-201ENST00000603038 ERVK-7P63135 1459 aa24.19■■□□□ 1.46
CHCHD2P3-201ENST00000603038 SPATA31D1Q6ZQQ2 1576 aa24.18■■□□□ 1.46
CHCHD2P3-201ENST00000603038 PRDM15P57071 1507 aaPredicted RBP24.18■■□□□ 1.46
CHCHD2P3-201ENST00000603038 LTBP4Q8N2S1 1624 aa24.17■■□□□ 1.46
CHCHD2P3-201ENST00000603038 ZNF335Q9H4Z2 1342 aaPredicted RBP24.17■■□□□ 1.46
CHCHD2P3-201ENST00000603038 NLRP1Q9C000 1473 aa24.16■■□□□ 1.46
CHCHD2P3-201ENST00000603038 THEMISQ8N1K5 641 aaPredicted RBP24.16■■□□□ 1.46
CHCHD2P3-201ENST00000603038 DEPDC5O75140 1603 aa24.16■■□□□ 1.46
CHCHD2P3-201ENST00000603038 ITGAEP38570 1179 aa24.14■■□□□ 1.45
CHCHD2P3-201ENST00000603038 UGGT1Q9NYU2 1555 aa24.13■■□□□ 1.45
CHCHD2P3-201ENST00000603038 ARHGAP31Q2M1Z3 1444 aa24.13■■□□□ 1.45
CHCHD2P3-201ENST00000603038 ANKLE2Q86XL3 938 aa24.13■■□□□ 1.45
CHCHD2P3-201ENST00000603038 KANK1Q14678 1352 aa24.13■■□□□ 1.45
CHCHD2P3-201ENST00000603038 ANKRD50Q9ULJ7 1429 aa24.11■■□□□ 1.45
CHCHD2P3-201ENST00000603038 VWDEQ8N2E2 1590 aa24.1■■□□□ 1.45
CHCHD2P3-201ENST00000603038 NEURL4Q96JN8 1562 aa24.09■■□□□ 1.45
CHCHD2P3-201ENST00000603038 LMTK2Q8IWU2 1503 aa24.06■■□□□ 1.44
CHCHD2P3-201ENST00000603038 POLR1AO95602 1720 aaPredicted RBP24.06■■□□□ 1.44
CHCHD2P3-201ENST00000603038 IDI1Q13907 227 aa24.04■■□□□ 1.44
CHCHD2P3-201ENST00000603038 UBR1Q8IWV7 1749 aa24.03■■□□□ 1.44
CHCHD2P3-201ENST00000603038 ROCK1Q13464 1354 aa24.03■■□□□ 1.44
CHCHD2P3-201ENST00000603038 LTKP29376 864 aa24.02■■□□□ 1.44
CHCHD2P3-201ENST00000603038 NPHP4O75161 1426 aaPredicted RBP24.01■■□□□ 1.43
CHCHD2P3-201ENST00000603038 MED14O60244 1454 aa24■■□□□ 1.43
CHCHD2P3-201ENST00000603038 TXNDC2Q86VQ3 553 aa23.98■■□□□ 1.43
CHCHD2P3-201ENST00000603038 NOS1P29475 1434 aa23.98■■□□□ 1.43
CHCHD2P3-201ENST00000603038 EFCAB6Q5THR3 1501 aa23.98■■□□□ 1.43
CHCHD2P3-201ENST00000603038 PIK3C2BO00750 1634 aa23.98■■□□□ 1.43
CHCHD2P3-201ENST00000603038 SYNMO15061 1565 aa23.97■■□□□ 1.43
CHCHD2P3-201ENST00000603038 STAG3Q9UJ98 1225 aa23.95■■□□□ 1.42
CHCHD2P3-201ENST00000603038 ARHGAP23Q9P227 1491 aa23.94■■□□□ 1.42
CHCHD2P3-201ENST00000603038 RRBP1Q9P2E9 1410 aaKnown RBP23.94■■□□□ 1.42
CHCHD2P3-201ENST00000603038 IQSEC2Q5JU85 1478 aa23.94■■□□□ 1.42
CHCHD2P3-201ENST00000603038 UNC13BO14795 1591 aa23.93■■□□□ 1.42
CHCHD2P3-201ENST00000603038 IQGAP1P46940 1657 aa23.92■■□□□ 1.42
CHCHD2P3-201ENST00000603038 SLIT1O75093 1534 aa23.92■■□□□ 1.42
CHCHD2P3-201ENST00000603038 SCAF11Q99590 1463 aaKnown RBP23.91■■□□□ 1.42
CHCHD2P3-201ENST00000603038 TMEM2Q9UHN6 1383 aa23.91■■□□□ 1.42
CHCHD2P3-201ENST00000603038 TET3O43151 1660 aa23.9■■□□□ 1.42
CHCHD2P3-201ENST00000603038 UBAP1LF5GYI3 381 aa23.9■■□□□ 1.42
CHCHD2P3-201ENST00000603038 SLC52A1Q9NWF4 448 aa23.9■■□□□ 1.42
CHCHD2P3-201ENST00000603038 NUP155O75694 1391 aa23.9■■□□□ 1.42
CHCHD2P3-201ENST00000603038 EID1Q9Y6B2 187 aa23.89■■□□□ 1.41
CHCHD2P3-201ENST00000603038 STRCP1A6NGW2 1772 aa23.87■■□□□ 1.41
CHCHD2P3-201ENST00000603038 RPRD2Q5VT52 1461 aaKnown RBP23.87■■□□□ 1.41
CHCHD2P3-201ENST00000603038 E9PCH4 1651 aa23.85■■□□□ 1.41
CHCHD2P3-201ENST00000603038 GCC2Q8IWJ2 1684 aa23.85■■□□□ 1.41
CHCHD2P3-201ENST00000603038 CPS1P31327 1500 aa23.84■■□□□ 1.41
CHCHD2P3-201ENST00000603038 SENP3Q9H4L4 574 aaPredicted RBP23.84■■□□□ 1.41
CHCHD2P3-201ENST00000603038 IQGAP3Q86VI3 1631 aa23.84■■□□□ 1.41
CHCHD2P3-201ENST00000603038 KDM5AP29375 1690 aaKnown RBP23.82■■□□□ 1.4
CHCHD2P3-201ENST00000603038 MYO5BQ9ULV0 1848 aa23.82■■□□□ 1.4
CHCHD2P3-201ENST00000603038 ADGRB3O60242 1522 aa23.81■■□□□ 1.4
CHCHD2P3-201ENST00000603038 CHGAP10645 457 aaKnown RBP23.8■■□□□ 1.4
CHCHD2P3-201ENST00000603038 NAIPQ13075 1403 aa23.8■■□□□ 1.4
CHCHD2P3-201ENST00000603038 SLC26A8Q96RN1 970 aa23.8■■□□□ 1.4
CHCHD2P3-201ENST00000603038 PIP4K2BP78356 416 aa23.77■■□□□ 1.4
CHCHD2P3-201ENST00000603038 LRRC7Q96NW7 1537 aa23.77■■□□□ 1.4
CHCHD2P3-201ENST00000603038 NUTM2DQ5VT03 806 aaPredicted RBP23.76■■□□□ 1.39
CHCHD2P3-201ENST00000603038 TMEM131LA2VDJ0 1609 aa23.76■■□□□ 1.39
CHCHD2P3-201ENST00000603038 TOM1O60784 492 aa23.74■■□□□ 1.39
CHCHD2P3-201ENST00000603038 ZFYVE9O95405 1425 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms