RNA–Protein interactions for RNA: ENST00000602591.1

HCG18-246, Transcript of HLA complex group 18, humanhuman

Gene HCG18, Length 1,976 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-246ENST00000602591 MPHOSPH9Q99550 1183 aa17.48■□□□□ 0.39
HCG18-246ENST00000602591 NUP155O75694 1391 aa17.47■□□□□ 0.39
HCG18-246ENST00000602591 MAGI2Q86UL8 1455 aa17.47■□□□□ 0.39
HCG18-246ENST00000602591 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.46■□□□□ 0.39
HCG18-246ENST00000602591 DEPDC5O75140 1603 aa17.46■□□□□ 0.39
HCG18-246ENST00000602591 KIF3BO15066 747 aa17.46■□□□□ 0.39
HCG18-246ENST00000602591 KDM5DQ9BY66 1539 aa17.46■□□□□ 0.38
HCG18-246ENST00000602591 EIF2AK4Q9P2K8 1649 aaKnown RBP17.44■□□□□ 0.38
HCG18-246ENST00000602591 ARHGEF40Q8TER5 1519 aa17.44■□□□□ 0.38
HCG18-246ENST00000602591 FAM135AQ9P2D6 1515 aa17.43■□□□□ 0.38
HCG18-246ENST00000602591 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
HCG18-246ENST00000602591 IQGAP3Q86VI3 1631 aa17.42■□□□□ 0.38
HCG18-246ENST00000602591 SIN3AQ96ST3 1273 aa17.42■□□□□ 0.38
HCG18-246ENST00000602591 ATP10AO60312 1499 aa17.42■□□□□ 0.38
HCG18-246ENST00000602591 RNF17Q9BXT8 1623 aaKnown RBP17.41■□□□□ 0.38
HCG18-246ENST00000602591 BCORL1Q5H9F3 1711 aa17.41■□□□□ 0.38
HCG18-246ENST00000602591 PRDM15P57071 1507 aaPredicted RBP17.4■□□□□ 0.38
HCG18-246ENST00000602591 VWDEQ8N2E2 1590 aa17.4■□□□□ 0.38
HCG18-246ENST00000602591 PKD2Q13563 968 aa17.39■□□□□ 0.37
HCG18-246ENST00000602591 REREQ9P2R6 1566 aa17.37■□□□□ 0.37
HCG18-246ENST00000602591 GGT6Q6P531 493 aa17.37■□□□□ 0.37
HCG18-246ENST00000602591 CEP152O94986 1710 aa17.36■□□□□ 0.37
HCG18-246ENST00000602591 ANKRD30BQ9BXX2 1392 aa17.35■□□□□ 0.37
HCG18-246ENST00000602591 E9PCH4 1651 aa17.34■□□□□ 0.37
HCG18-246ENST00000602591 CLSPNQ9HAW4 1339 aa17.34■□□□□ 0.37
HCG18-246ENST00000602591 NEUROD1Q13562 356 aa17.33■□□□□ 0.36
HCG18-246ENST00000602591 PLA2R1Q13018 1463 aa17.32■□□□□ 0.36
HCG18-246ENST00000602591 AGLP35573 1532 aa17.32■□□□□ 0.36
HCG18-246ENST00000602591 ABCC3O15438 1527 aa17.31■□□□□ 0.36
HCG18-246ENST00000602591 TET3O43151 1660 aa17.31■□□□□ 0.36
HCG18-246ENST00000602591 MLECQ14165 292 aa17.29■□□□□ 0.36
HCG18-246ENST00000602591 ACIN1Q9UKV3 1341 aaKnown RBP17.29■□□□□ 0.36
HCG18-246ENST00000602591 EFCAB6Q5THR3 1501 aa17.28■□□□□ 0.36
HCG18-246ENST00000602591 LMTK2Q8IWU2 1503 aa17.28■□□□□ 0.36
HCG18-246ENST00000602591 KANK1Q14678 1352 aa17.28■□□□□ 0.36
HCG18-246ENST00000602591 CFAP65Q6ZU64 1925 aaKnown RBP17.27■□□□□ 0.35
HCG18-246ENST00000602591 CAMSAP1Q5T5Y3 1602 aa17.26■□□□□ 0.35
HCG18-246ENST00000602591 WASHC2CQ9Y4E1 1318 aa17.25■□□□□ 0.35
HCG18-246ENST00000602591 NPATQ14207 1427 aa17.25■□□□□ 0.35
HCG18-246ENST00000602591 CLTCQ00610 1675 aaKnown RBP17.24■□□□□ 0.35
HCG18-246ENST00000602591 ARID4BQ4LE39 1312 aaPredicted RBP17.23■□□□□ 0.35
HCG18-246ENST00000602591 ZEB1P37275 1124 aaPredicted RBP17.23■□□□□ 0.35
HCG18-246ENST00000602591 RPRD2Q5VT52 1461 aaKnown RBP17.23■□□□□ 0.35
HCG18-246ENST00000602591 UGGT1Q9NYU2 1555 aa17.23■□□□□ 0.35
HCG18-246ENST00000602591 SPHKAPQ2M3C7 1700 aa17.22■□□□□ 0.35
HCG18-246ENST00000602591 ZC3H13Q5T200 1668 aaKnown RBP17.21■□□□□ 0.35
HCG18-246ENST00000602591 PTPRTO14522 1441 aa17.2■□□□□ 0.34
HCG18-246ENST00000602591 CLTCL1P53675 1640 aa17.19■□□□□ 0.34
HCG18-246ENST00000602591 TRPM2O94759 1503 aa17.19■□□□□ 0.34
HCG18-246ENST00000602591 FBXO31Q5XUX0 539 aaPredicted RBP17.17■□□□□ 0.34
HCG18-246ENST00000602591 SYNMO15061 1565 aa17.16■□□□□ 0.34
HCG18-246ENST00000602591 L3MBTL2Q969R5 705 aa17.15■□□□□ 0.34
HCG18-246ENST00000602591 CCDC144AA2RUR9 1427 aa17.15■□□□□ 0.34
HCG18-246ENST00000602591 ARHGAP31Q2M1Z3 1444 aa17.14■□□□□ 0.33
HCG18-246ENST00000602591 PREX1Q8TCU6 1659 aa17.14■□□□□ 0.33
HCG18-246ENST00000602591 TONSLQ96HA7 1378 aa17.14■□□□□ 0.33
HCG18-246ENST00000602591 NOS1P29475 1434 aa17.13■□□□□ 0.33
HCG18-246ENST00000602591 FER1L4A9Z1Z3 1794 aa17.12■□□□□ 0.33
HCG18-246ENST00000602591 ZMYM3Q14202 1370 aa17.11■□□□□ 0.33
HCG18-246ENST00000602591 PPP6R1Q9UPN7 881 aa17.11■□□□□ 0.33
HCG18-246ENST00000602591 SPATA31E1Q6ZUB1 1445 aa17.1■□□□□ 0.33
HCG18-246ENST00000602591 SLC24A1O60721 1099 aa17.1■□□□□ 0.33
HCG18-246ENST00000602591 PPP1R15AO75807 674 aaPredicted RBP17.1■□□□□ 0.33
HCG18-246ENST00000602591 MROH2AA6NES4 1674 aa17.1■□□□□ 0.33
HCG18-246ENST00000602591 MADDQ8WXG6 1647 aa17.1■□□□□ 0.33
HCG18-246ENST00000602591 ERVK-7P63135 1459 aa17.1■□□□□ 0.33
HCG18-246ENST00000602591 CEBPAP49715 358 aaPredicted RBP17.09■□□□□ 0.33
HCG18-246ENST00000602591 PIK3C2BO00750 1634 aa17.09■□□□□ 0.33
HCG18-246ENST00000602591 RGL3Q3MIN7 710 aa17.09■□□□□ 0.33
HCG18-246ENST00000602591 CNTLNQ9NXG0 1405 aa17.08■□□□□ 0.32
HCG18-246ENST00000602591 C3P01024 1663 aa17.07■□□□□ 0.32
HCG18-246ENST00000602591 ADAMTSL3P82987 1691 aa17.07■□□□□ 0.32
HCG18-246ENST00000602591 SPATA31D1Q6ZQQ2 1576 aa17.06■□□□□ 0.32
HCG18-246ENST00000602591 NBPF8Q3BBV2 869 aa17.06■□□□□ 0.32
HCG18-246ENST00000602591 TIMELESSQ9UNS1 1208 aa17.06■□□□□ 0.32
HCG18-246ENST00000602591 RIMS1Q86UR5 1692 aaKnown RBP17.05■□□□□ 0.32
HCG18-246ENST00000602591 PLPPR3Q6T4P5 718 aa17.05■□□□□ 0.32
HCG18-246ENST00000602591 IDI1Q13907 227 aa17.04■□□□□ 0.32
HCG18-246ENST00000602591 ESF1Q9H501 851 aaKnown RBP17.04■□□□□ 0.32
HCG18-246ENST00000602591 KIF1BO60333 1816 aa17.04■□□□□ 0.32
HCG18-246ENST00000602591 MYO5BQ9ULV0 1848 aa17.04■□□□□ 0.32
HCG18-246ENST00000602591 ADGRB3O60242 1522 aa17.03■□□□□ 0.32
HCG18-246ENST00000602591 DCAF11Q8TEB1 546 aa17.02■□□□□ 0.32
HCG18-246ENST00000602591 KDM2AQ9Y2K7 1162 aa17.02■□□□□ 0.32
HCG18-246ENST00000602591 TMEM131LA2VDJ0 1609 aa16.99■□□□□ 0.31
HCG18-246ENST00000602591 CHGAP10645 457 aaKnown RBP16.99■□□□□ 0.31
HCG18-246ENST00000602591 ZNF326Q5BKZ1 582 aaKnown RBP16.99■□□□□ 0.31
HCG18-246ENST00000602591 IFT172Q9UG01 1749 aa16.98■□□□□ 0.31
HCG18-246ENST00000602591 NEURL4Q96JN8 1562 aa16.97■□□□□ 0.31
HCG18-246ENST00000602591 TNRQ92752 1358 aa16.96■□□□□ 0.31
HCG18-246ENST00000602591 UHRF1BP1Q6BDS2 1440 aa16.95■□□□□ 0.3
HCG18-246ENST00000602591 SLC52A1Q9NWF4 448 aa16.95■□□□□ 0.3
HCG18-246ENST00000602591 PRAG1Q86YV5 1406 aa16.95■□□□□ 0.3
HCG18-246ENST00000602591 NUTM2DQ5VT03 806 aaPredicted RBP16.95■□□□□ 0.3
HCG18-246ENST00000602591 PPLO60437 1756 aa16.94■□□□□ 0.3
HCG18-246ENST00000602591 NEXMIFQ5QGS0 1516 aa16.93■□□□□ 0.3
HCG18-246ENST00000602591 ADGRF5Q8IZF2 1346 aa16.93■□□□□ 0.3
HCG18-246ENST00000602591 A2ML1A8K2U0 1454 aa16.93■□□□□ 0.3
HCG18-246ENST00000602591 SENP3Q9H4L4 574 aaPredicted RBP16.91■□□□□ 0.3
HCG18-246ENST00000602591 PTPRMP28827 1452 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms