RNA–Protein interactions for RNA: ENST00000602421.5

MACF1-233, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2 BASIC

Gene MACF1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-233ENST00000602421 NEUROD1Q13562 356 aa26.1■■□□□ 1.77
MACF1-233ENST00000602421 PKD2Q13563 968 aa26.1■■□□□ 1.77
MACF1-233ENST00000602421 FOXD1Q16676 465 aa26.09■■□□□ 1.77
MACF1-233ENST00000602421 ABCA6Q8N139 1617 aa26.08■■□□□ 1.77
MACF1-233ENST00000602421 MAGI2Q86UL8 1455 aa26.08■■□□□ 1.77
MACF1-233ENST00000602421 EIF2AK4Q9P2K8 1649 aaKnown RBP26.07■■□□□ 1.76
MACF1-233ENST00000602421 FAM135AQ9P2D6 1515 aa26.06■■□□□ 1.76
MACF1-233ENST00000602421 COL17A1Q9UMD9 1497 aaPredicted RBP26.06■■□□□ 1.76
MACF1-233ENST00000602421 DIP2CQ9Y2E4 1556 aa26.05■■□□□ 1.76
MACF1-233ENST00000602421 YEATS2Q9ULM3 1422 aa26.05■■□□□ 1.76
MACF1-233ENST00000602421 KANK1Q14678 1352 aa26.03■■□□□ 1.76
MACF1-233ENST00000602421 ANKRD30BQ9BXX2 1392 aa26.03■■□□□ 1.76
MACF1-233ENST00000602421 IQGAP3Q86VI3 1631 aa26.02■■□□□ 1.76
MACF1-233ENST00000602421 TIMELESSQ9UNS1 1208 aa26.01■■□□□ 1.75
MACF1-233ENST00000602421 DEPDC5O75140 1603 aa26■■□□□ 1.75
MACF1-233ENST00000602421 ATP10AO60312 1499 aa25.98■■□□□ 1.75
MACF1-233ENST00000602421 TONSLQ96HA7 1378 aa25.95■■□□□ 1.75
MACF1-233ENST00000602421 PRDM15P57071 1507 aaPredicted RBP25.94■■□□□ 1.74
MACF1-233ENST00000602421 GGT6Q6P531 493 aa25.94■■□□□ 1.74
MACF1-233ENST00000602421 RNF17Q9BXT8 1623 aaKnown RBP25.93■■□□□ 1.74
MACF1-233ENST00000602421 BCORL1Q5H9F3 1711 aa25.92■■□□□ 1.74
MACF1-233ENST00000602421 VWDEQ8N2E2 1590 aa25.92■■□□□ 1.74
MACF1-233ENST00000602421 MROH1Q8NDA8 1641 aa25.92■■□□□ 1.74
MACF1-233ENST00000602421 REREQ9P2R6 1566 aa25.89■■□□□ 1.73
MACF1-233ENST00000602421 ARHGEF40Q8TER5 1519 aa25.88■■□□□ 1.73
MACF1-233ENST00000602421 RPRD2Q5VT52 1461 aaKnown RBP25.88■■□□□ 1.73
MACF1-233ENST00000602421 TET3O43151 1660 aa25.85■■□□□ 1.73
MACF1-233ENST00000602421 AGLP35573 1532 aa25.84■■□□□ 1.73
MACF1-233ENST00000602421 LMTK2Q8IWU2 1503 aa25.84■■□□□ 1.73
MACF1-233ENST00000602421 WASHC2CQ9Y4E1 1318 aa25.84■■□□□ 1.73
MACF1-233ENST00000602421 PPP1R15AO75807 674 aaPredicted RBP25.81■■□□□ 1.72
MACF1-233ENST00000602421 CCDC144AA2RUR9 1427 aa25.79■■□□□ 1.72
MACF1-233ENST00000602421 PLA2R1Q13018 1463 aa25.79■■□□□ 1.72
MACF1-233ENST00000602421 E9PCH4 1651 aa25.79■■□□□ 1.72
MACF1-233ENST00000602421 ABCC3O15438 1527 aa25.78■■□□□ 1.72
MACF1-233ENST00000602421 EFCAB6Q5THR3 1501 aa25.77■■□□□ 1.72
MACF1-233ENST00000602421 L3MBTL2Q969R5 705 aa25.77■■□□□ 1.72
MACF1-233ENST00000602421 PPP6R1Q9UPN7 881 aa25.76■■□□□ 1.71
MACF1-233ENST00000602421 CEP152O94986 1710 aa25.76■■□□□ 1.71
MACF1-233ENST00000602421 PTPRTO14522 1441 aa25.75■■□□□ 1.71
MACF1-233ENST00000602421 ARID4BQ4LE39 1312 aaPredicted RBP25.72■■□□□ 1.71
MACF1-233ENST00000602421 MLECQ14165 292 aa25.71■■□□□ 1.71
MACF1-233ENST00000602421 ZC3H13Q5T200 1668 aaKnown RBP25.7■■□□□ 1.71
MACF1-233ENST00000602421 TRPM2O94759 1503 aa25.7■■□□□ 1.7
MACF1-233ENST00000602421 NPATQ14207 1427 aa25.69■■□□□ 1.7
MACF1-233ENST00000602421 SPHKAPQ2M3C7 1700 aa25.68■■□□□ 1.7
MACF1-233ENST00000602421 SIGLEC1Q9BZZ2 1709 aa25.68■■□□□ 1.7
MACF1-233ENST00000602421 CAMSAP1Q5T5Y3 1602 aa25.67■■□□□ 1.7
MACF1-233ENST00000602421 ARHGAP31Q2M1Z3 1444 aa25.67■■□□□ 1.7
MACF1-233ENST00000602421 ESF1Q9H501 851 aaKnown RBP25.63■■□□□ 1.69
MACF1-233ENST00000602421 CNTLNQ9NXG0 1405 aa25.61■■□□□ 1.69
MACF1-233ENST00000602421 RGL3Q3MIN7 710 aa25.61■■□□□ 1.69
MACF1-233ENST00000602421 CLTCL1P53675 1640 aa25.59■■□□□ 1.69
MACF1-233ENST00000602421 ZNF316A6NFI3 1004 aaPredicted RBP25.58■■□□□ 1.69
MACF1-233ENST00000602421 DCAF11Q8TEB1 546 aa25.58■■□□□ 1.69
MACF1-233ENST00000602421 NOS1P29475 1434 aa25.58■■□□□ 1.69
MACF1-233ENST00000602421 SPATA31E1Q6ZUB1 1445 aa25.55■■□□□ 1.68
MACF1-233ENST00000602421 KDM2AQ9Y2K7 1162 aa25.55■■□□□ 1.68
MACF1-233ENST00000602421 CLTCQ00610 1675 aaKnown RBP25.55■■□□□ 1.68
MACF1-233ENST00000602421 NBPF8Q3BBV2 869 aa25.54■■□□□ 1.68
MACF1-233ENST00000602421 UGGT1Q9NYU2 1555 aa25.53■■□□□ 1.68
MACF1-233ENST00000602421 ZNF326Q5BKZ1 582 aaKnown RBP25.53■■□□□ 1.68
MACF1-233ENST00000602421 CFAP65Q6ZU64 1925 aaKnown RBP25.52■■□□□ 1.68
MACF1-233ENST00000602421 UHRF1BP1Q6BDS2 1440 aa25.51■■□□□ 1.67
MACF1-233ENST00000602421 FBXO31Q5XUX0 539 aaPredicted RBP25.5■■□□□ 1.67
MACF1-233ENST00000602421 SLC52A1Q9NWF4 448 aa25.49■■□□□ 1.67
MACF1-233ENST00000602421 NEURL4Q96JN8 1562 aa25.49■■□□□ 1.67
MACF1-233ENST00000602421 ZMYM3Q14202 1370 aa25.49■■□□□ 1.67
MACF1-233ENST00000602421 ERVK-7P63135 1459 aa25.48■■□□□ 1.67
MACF1-233ENST00000602421 CHGAP10645 457 aaKnown RBP25.48■■□□□ 1.67
MACF1-233ENST00000602421 SYNMO15061 1565 aa25.47■■□□□ 1.67
MACF1-233ENST00000602421 PREX1Q8TCU6 1659 aa25.47■■□□□ 1.67
MACF1-233ENST00000602421 STAC3Q96MF2 364 aa25.46■■□□□ 1.67
MACF1-233ENST00000602421 KIF1BO60333 1816 aa25.45■■□□□ 1.67
MACF1-233ENST00000602421 IDI1Q13907 227 aa25.44■■□□□ 1.66
MACF1-233ENST00000602421 PIK3C2BO00750 1634 aa25.42■■□□□ 1.66
MACF1-233ENST00000602421 PRAG1Q86YV5 1406 aa25.42■■□□□ 1.66
MACF1-233ENST00000602421 ADGRB3O60242 1522 aa25.41■■□□□ 1.66
MACF1-233ENST00000602421 SPATA31D1Q6ZQQ2 1576 aa25.4■■□□□ 1.66
MACF1-233ENST00000602421 RALGAPBQ86X10 1494 aa25.38■■□□□ 1.65
MACF1-233ENST00000602421 MROH2AA6NES4 1674 aa25.38■■□□□ 1.65
MACF1-233ENST00000602421 RPGRIP1LQ68CZ1 1315 aa25.37■■□□□ 1.65
MACF1-233ENST00000602421 EIF4G2P78344 907 aaKnown RBP eCLIP25.37■■□□□ 1.65
MACF1-233ENST00000602421 STAG3Q9UJ98 1225 aa25.34■■□□□ 1.65
MACF1-233ENST00000602421 TNRQ92752 1358 aa25.34■■□□□ 1.65
MACF1-233ENST00000602421 HSPA5P11021 654 aaKnown RBP25.33■■□□□ 1.65
MACF1-233ENST00000602421 FER1L4A9Z1Z3 1794 aa25.33■■□□□ 1.65
MACF1-233ENST00000602421 MYOM2P54296 1465 aa25.32■■□□□ 1.64
MACF1-233ENST00000602421 ROCK2O75116 1388 aaKnown RBP25.31■■□□□ 1.64
MACF1-233ENST00000602421 HIRIP3Q9BW71 556 aaPredicted RBP25.31■■□□□ 1.64
MACF1-233ENST00000602421 CARD11Q9BXL7 1154 aa25.31■■□□□ 1.64
MACF1-233ENST00000602421 CEBPAP49715 358 aaPredicted RBP25.3■■□□□ 1.64
MACF1-233ENST00000602421 AEBP2Q6ZN18 517 aaPredicted RBP25.3■■□□□ 1.64
MACF1-233ENST00000602421 TRPM1Q7Z4N2 1603 aa25.28■■□□□ 1.64
MACF1-233ENST00000602421 MADDQ8WXG6 1647 aa25.28■■□□□ 1.64
MACF1-233ENST00000602421 ADGRF5Q8IZF2 1346 aa25.28■■□□□ 1.64
MACF1-233ENST00000602421 TMEM131LA2VDJ0 1609 aa25.27■■□□□ 1.64
MACF1-233ENST00000602421 IFT172Q9UG01 1749 aa25.26■■□□□ 1.63
MACF1-233ENST00000602421 VGFO15240 615 aaPredicted RBP25.26■■□□□ 1.63
MACF1-233ENST00000602421 NBPF1Q3BBV0 1214 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms