RNA–Protein interactions for RNA: ENST00000601772.1

DDX49-211, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 342 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-211ENST00000601772 SYNMO15061 1565 aa13.45□□□□□ -0.26
DDX49-211ENST00000601772 TIAM1Q13009 1591 aa13.45□□□□□ -0.26
DDX49-211ENST00000601772 NPHP4O75161 1426 aaPredicted RBP13.45□□□□□ -0.26
DDX49-211ENST00000601772 MTUS2Q5JR59 1369 aa13.45□□□□□ -0.26
DDX49-211ENST00000601772 ANKLE2Q86XL3 938 aa13.44□□□□□ -0.26
DDX49-211ENST00000601772 STRCP1A6NGW2 1772 aa13.44□□□□□ -0.26
DDX49-211ENST00000601772 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.44□□□□□ -0.26
DDX49-211ENST00000601772 ABCC1P33527 1531 aa13.44□□□□□ -0.26
DDX49-211ENST00000601772 GGT6Q6P531 493 aa13.43□□□□□ -0.26
DDX49-211ENST00000601772 SAMD9LQ8IVG5 1584 aa13.42□□□□□ -0.26
DDX49-211ENST00000601772 GPATCH8Q9UKJ3 1502 aaKnown RBP13.41□□□□□ -0.26
DDX49-211ENST00000601772 IQGAP1P46940 1657 aa13.4□□□□□ -0.26
DDX49-211ENST00000601772 TNRQ92752 1358 aa13.39□□□□□ -0.27
DDX49-211ENST00000601772 CCNB3Q8WWL7 1395 aa13.37□□□□□ -0.27
DDX49-211ENST00000601772 DEPDC5O75140 1603 aa13.37□□□□□ -0.27
DDX49-211ENST00000601772 SYCP2Q9BX26 1530 aa13.37□□□□□ -0.27
DDX49-211ENST00000601772 MED14O60244 1454 aa13.36□□□□□ -0.27
DDX49-211ENST00000601772 MAP3K1Q13233 1512 aa13.36□□□□□ -0.27
DDX49-211ENST00000601772 SPAG9O60271 1321 aaKnown RBP13.36□□□□□ -0.27
DDX49-211ENST00000601772 NCOA2Q15596 1464 aa13.36□□□□□ -0.27
DDX49-211ENST00000601772 LRRC9Q6ZRR7 1453 aa13.36□□□□□ -0.27
DDX49-211ENST00000601772 MEX3CQ5U5Q3 659 aaKnown RBP13.35□□□□□ -0.27
DDX49-211ENST00000601772 FBXO31Q5XUX0 539 aaPredicted RBP13.35□□□□□ -0.27
DDX49-211ENST00000601772 ZNF777Q9ULD5 760 aaPredicted RBP13.35□□□□□ -0.27
DDX49-211ENST00000601772 FAM135BQ49AJ0 1406 aa13.35□□□□□ -0.27
DDX49-211ENST00000601772 FAM135AQ9P2D6 1515 aa13.34□□□□□ -0.27
DDX49-211ENST00000601772 PLXNC1O60486 1568 aa13.34□□□□□ -0.27
DDX49-211ENST00000601772 THEMISQ8N1K5 641 aaPredicted RBP13.34□□□□□ -0.27
DDX49-211ENST00000601772 A2MP01023 1474 aa13.34□□□□□ -0.27
DDX49-211ENST00000601772 ROBO1Q9Y6N7 1651 aa13.34□□□□□ -0.27
DDX49-211ENST00000601772 UGGT1Q9NYU2 1555 aa13.33□□□□□ -0.28
DDX49-211ENST00000601772 PLEKHH2Q8IVE3 1493 aa13.32□□□□□ -0.28
DDX49-211ENST00000601772 CFDP1Q9UEE9 299 aaPredicted RBP13.32□□□□□ -0.28
DDX49-211ENST00000601772 ATP7AQ04656 1500 aa13.32□□□□□ -0.28
DDX49-211ENST00000601772 ZNF772Q68DY9 489 aaPredicted RBP13.31□□□□□ -0.28
DDX49-211ENST00000601772 INO80Q9ULG1 1556 aaPredicted RBP13.31□□□□□ -0.28
DDX49-211ENST00000601772 XIRP1Q702N8 1843 aaKnown RBP13.3□□□□□ -0.28
DDX49-211ENST00000601772 KIAA1107Q9UPP5 1409 aa13.3□□□□□ -0.28
DDX49-211ENST00000601772 RXRBP28702 533 aa13.29□□□□□ -0.28
DDX49-211ENST00000601772 HNRNPMP52272 730 aaKnown RBP eCLIP13.29□□□□□ -0.28
DDX49-211ENST00000601772 PCGF6Q9BYE7 350 aa13.29□□□□□ -0.28
DDX49-211ENST00000601772 JCADQ9P266 1359 aa13.29□□□□□ -0.28
DDX49-211ENST00000601772 PHLPP1O60346 1717 aa13.28□□□□□ -0.28
DDX49-211ENST00000601772 KANK4Q5T7N3 995 aaPredicted RBP13.28□□□□□ -0.28
DDX49-211ENST00000601772 CAMSAP2Q08AD1 1489 aa13.28□□□□□ -0.28
DDX49-211ENST00000601772 ADGBQ8N7X0 1667 aa13.28□□□□□ -0.28
DDX49-211ENST00000601772 TRIM26Q12899 539 aaPredicted RBP13.27□□□□□ -0.29
DDX49-211ENST00000601772 ZNF644Q9H582 1327 aaPredicted RBP13.27□□□□□ -0.29
DDX49-211ENST00000601772 PZPP20742 1482 aa13.27□□□□□ -0.29
DDX49-211ENST00000601772 NLRP1Q9C000 1473 aa13.27□□□□□ -0.29
DDX49-211ENST00000601772 LRP6O75581 1613 aa13.27□□□□□ -0.29
DDX49-211ENST00000601772 ZRANB1Q9UGI0 708 aa13.26□□□□□ -0.29
DDX49-211ENST00000601772 ZC3H13Q5T200 1668 aaKnown RBP13.25□□□□□ -0.29
DDX49-211ENST00000601772 MBD5Q9P267 1494 aa13.25□□□□□ -0.29
DDX49-211ENST00000601772 ZEB1P37275 1124 aaPredicted RBP13.25□□□□□ -0.29
DDX49-211ENST00000601772 APLP2Q06481 763 aa13.25□□□□□ -0.29
DDX49-211ENST00000601772 ARHGEF5Q12774 1597 aa13.24□□□□□ -0.29
DDX49-211ENST00000601772 SETBP1Q9Y6X0 1596 aa13.24□□□□□ -0.29
DDX49-211ENST00000601772 MIA2Q96PC5 1412 aa13.24□□□□□ -0.29
DDX49-211ENST00000601772 KDM5DQ9BY66 1539 aa13.23□□□□□ -0.29
DDX49-211ENST00000601772 CCDC141Q6ZP82 1450 aa13.23□□□□□ -0.29
DDX49-211ENST00000601772 MYOM3Q5VTT5 1437 aa13.22□□□□□ -0.29
DDX49-211ENST00000601772 TMEM94Q12767 1356 aa13.22□□□□□ -0.29
DDX49-211ENST00000601772 NUTM2BA6NNL0 878 aaPredicted RBP13.22□□□□□ -0.29
DDX49-211ENST00000601772 NUTM2EB1AL46 878 aaPredicted RBP13.22□□□□□ -0.29
DDX49-211ENST00000601772 FOXD1Q16676 465 aa13.22□□□□□ -0.29
DDX49-211ENST00000601772 NUTM2DQ5VT03 806 aaPredicted RBP13.22□□□□□ -0.29
DDX49-211ENST00000601772 NUTM2AQ8IVF1 878 aaPredicted RBP13.22□□□□□ -0.29
DDX49-211ENST00000601772 CDK12Q9NYV4 1490 aaPredicted RBP13.22□□□□□ -0.29
DDX49-211ENST00000601772 RBM33Q96EV2 1170 aaKnown RBP13.21□□□□□ -0.29
DDX49-211ENST00000601772 CROCC2H7BZ55 1655 aa13.21□□□□□ -0.3
DDX49-211ENST00000601772 PTPN23Q9H3S7 1636 aa13.21□□□□□ -0.3
DDX49-211ENST00000601772 SPATA31A6Q5VVP1 1343 aa13.19□□□□□ -0.3
DDX49-211ENST00000601772 WASHC2CQ9Y4E1 1318 aa13.19□□□□□ -0.3
DDX49-211ENST00000601772 SCAF11Q99590 1463 aaKnown RBP13.19□□□□□ -0.3
DDX49-211ENST00000601772 RTEL1-TNFRSF6BF6WH68 1400 aa13.19□□□□□ -0.3
DDX49-211ENST00000601772 RGS12O14924 1447 aa13.19□□□□□ -0.3
DDX49-211ENST00000601772 MAST1Q9Y2H9 1570 aa13.19□□□□□ -0.3
DDX49-211ENST00000601772 COL16A1Q07092 1604 aaPredicted RBP13.17□□□□□ -0.3
DDX49-211ENST00000601772 KIF3BO15066 747 aa13.17□□□□□ -0.3
DDX49-211ENST00000601772 PROSER2Q86WR7 435 aaPredicted RBP13.16□□□□□ -0.3
DDX49-211ENST00000601772 RSPH4AQ5TD94 716 aa13.15□□□□□ -0.3
DDX49-211ENST00000601772 AFF2P51816 1311 aa13.14□□□□□ -0.31
DDX49-211ENST00000601772 FGD6Q6ZV73 1430 aa13.14□□□□□ -0.31
DDX49-211ENST00000601772 TXNDC2Q86VQ3 553 aa13.14□□□□□ -0.31
DDX49-211ENST00000601772 MSH6P52701 1360 aa13.13□□□□□ -0.31
DDX49-211ENST00000601772 ATAD2Q6PL18 1390 aa13.13□□□□□ -0.31
DDX49-211ENST00000601772 SLAIN2Q9P270 581 aa13.13□□□□□ -0.31
DDX49-211ENST00000601772 DHX29Q7Z478 1369 aaKnown RBP13.12□□□□□ -0.31
DDX49-211ENST00000601772 LTKP29376 864 aa13.12□□□□□ -0.31
DDX49-211ENST00000601772 UBR1Q8IWV7 1749 aa13.11□□□□□ -0.31
DDX49-211ENST00000601772 EIF2AK4Q9P2K8 1649 aaKnown RBP13.11□□□□□ -0.31
DDX49-211ENST00000601772 TSPY4P0CV99 314 aa13.11□□□□□ -0.31
DDX49-211ENST00000601772 TSPY10P0CW01 314 aa13.11□□□□□ -0.31
DDX49-211ENST00000601772 SHPRHQ149N8 1683 aa13.11□□□□□ -0.31
DDX49-211ENST00000601772 RBM6P78332 1123 aaKnown RBP13.09□□□□□ -0.31
DDX49-211ENST00000601772 EID1Q9Y6B2 187 aa13.09□□□□□ -0.31
DDX49-211ENST00000601772 ABCC5O15440 1437 aa13.08□□□□□ -0.32
DDX49-211ENST00000601772 DAPK1P53355 1430 aa13.08□□□□□ -0.32
DDX49-211ENST00000601772 KCNA6P17658 529 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms