RNA–Protein interactions for RNA: ENST00000601719.1

ZNF397-212, Transcript of zinc finger protein 397, humanhuman

TSL 5

Gene ZNF397, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-212ENST00000601719 SYCP2Q9BX26 1530 aa19.9■□□□□ 0.78
ZNF397-212ENST00000601719 GPATCH8Q9UKJ3 1502 aaKnown RBP19.9■□□□□ 0.78
ZNF397-212ENST00000601719 MIA2Q96PC5 1412 aa19.86■□□□□ 0.77
ZNF397-212ENST00000601719 CASKIN1Q8WXD9 1431 aa19.85■□□□□ 0.77
ZNF397-212ENST00000601719 CFDP1Q9UEE9 299 aaPredicted RBP19.85■□□□□ 0.77
ZNF397-212ENST00000601719 INO80Q9ULG1 1556 aaPredicted RBP19.85■□□□□ 0.77
ZNF397-212ENST00000601719 CCDC18Q5T9S5 1454 aa19.85■□□□□ 0.77
ZNF397-212ENST00000601719 PLEKHH2Q8IVE3 1493 aa19.85■□□□□ 0.77
ZNF397-212ENST00000601719 LRRIQ1Q96JM4 1722 aa19.85■□□□□ 0.77
ZNF397-212ENST00000601719 POLR1AO95602 1720 aaPredicted RBP19.84■□□□□ 0.77
ZNF397-212ENST00000601719 CDC42BPAQ5VT25 1732 aa19.84■□□□□ 0.77
ZNF397-212ENST00000601719 PZPP20742 1482 aa19.84■□□□□ 0.77
ZNF397-212ENST00000601719 DHX29Q7Z478 1369 aaKnown RBP19.83■□□□□ 0.77
ZNF397-212ENST00000601719 DEPDC5O75140 1603 aa19.82■□□□□ 0.76
ZNF397-212ENST00000601719 NLRP1Q9C000 1473 aa19.81■□□□□ 0.76
ZNF397-212ENST00000601719 FAM135BQ49AJ0 1406 aa19.8■□□□□ 0.76
ZNF397-212ENST00000601719 FAM135AQ9P2D6 1515 aa19.8■□□□□ 0.76
ZNF397-212ENST00000601719 EHMT2Q96KQ7 1210 aa19.79■□□□□ 0.76
ZNF397-212ENST00000601719 WASHC2CQ9Y4E1 1318 aa19.78■□□□□ 0.76
ZNF397-212ENST00000601719 KIF3BO15066 747 aa19.78■□□□□ 0.76
ZNF397-212ENST00000601719 UGGT1Q9NYU2 1555 aa19.78■□□□□ 0.76
ZNF397-212ENST00000601719 RTEL1-TNFRSF6BF6WH68 1400 aa19.77■□□□□ 0.76
ZNF397-212ENST00000601719 RNF17Q9BXT8 1623 aaKnown RBP19.77■□□□□ 0.76
ZNF397-212ENST00000601719 STRCP1A6NGW2 1772 aa19.76■□□□□ 0.75
ZNF397-212ENST00000601719 ZNF644Q9H582 1327 aaPredicted RBP19.76■□□□□ 0.75
ZNF397-212ENST00000601719 MBD5Q9P267 1494 aa19.75■□□□□ 0.75
ZNF397-212ENST00000601719 CCNB3Q8WWL7 1395 aa19.72■□□□□ 0.75
ZNF397-212ENST00000601719 SYNMO15061 1565 aa19.72■□□□□ 0.75
ZNF397-212ENST00000601719 UPF1Q92900 1129 aaKnown RBP eCLIP19.72■□□□□ 0.75
ZNF397-212ENST00000601719 IQGAP1P46940 1657 aa19.71■□□□□ 0.75
ZNF397-212ENST00000601719 ADGBQ8N7X0 1667 aa19.71■□□□□ 0.75
ZNF397-212ENST00000601719 KDM5DQ9BY66 1539 aa19.71■□□□□ 0.75
ZNF397-212ENST00000601719 LTKP29376 864 aa19.68■□□□□ 0.74
ZNF397-212ENST00000601719 FYCO1Q9BQS8 1478 aa19.66■□□□□ 0.74
ZNF397-212ENST00000601719 TXNDC2Q86VQ3 553 aa19.63■□□□□ 0.73
ZNF397-212ENST00000601719 SCAF11Q99590 1463 aaKnown RBP19.62■□□□□ 0.73
ZNF397-212ENST00000601719 ZC3H13Q5T200 1668 aaKnown RBP19.61■□□□□ 0.73
ZNF397-212ENST00000601719 TMEM94Q12767 1356 aa19.6■□□□□ 0.73
ZNF397-212ENST00000601719 RSPH4AQ5TD94 716 aa19.6■□□□□ 0.73
ZNF397-212ENST00000601719 ARHGAP23Q9P227 1491 aa19.59■□□□□ 0.73
ZNF397-212ENST00000601719 NCOA2Q15596 1464 aa19.58■□□□□ 0.72
ZNF397-212ENST00000601719 SETD1AO15047 1707 aaKnown RBP19.57■□□□□ 0.72
ZNF397-212ENST00000601719 JCADQ9P266 1359 aa19.57■□□□□ 0.72
ZNF397-212ENST00000601719 ERVK-7P63135 1459 aa19.56■□□□□ 0.72
ZNF397-212ENST00000601719 KCNA6P17658 529 aa19.56■□□□□ 0.72
ZNF397-212ENST00000601719 MTUS2Q5JR59 1369 aa19.56■□□□□ 0.72
ZNF397-212ENST00000601719 XIRP1Q702N8 1843 aaKnown RBP19.55■□□□□ 0.72
ZNF397-212ENST00000601719 SLIT1O75093 1534 aa19.55■□□□□ 0.72
ZNF397-212ENST00000601719 ZNF772Q68DY9 489 aaPredicted RBP19.53■□□□□ 0.72
ZNF397-212ENST00000601719 SLAIN2Q9P270 581 aa19.53■□□□□ 0.72
ZNF397-212ENST00000601719 EID1Q9Y6B2 187 aa19.53■□□□□ 0.72
ZNF397-212ENST00000601719 CCDC141Q6ZP82 1450 aa19.53■□□□□ 0.72
ZNF397-212ENST00000601719 ABCC3O15438 1527 aa19.52■□□□□ 0.72
ZNF397-212ENST00000601719 PROSER2Q86WR7 435 aaPredicted RBP19.52■□□□□ 0.72
ZNF397-212ENST00000601719 TRIM52Q96A61 297 aa19.51■□□□□ 0.71
ZNF397-212ENST00000601719 ROBO1Q9Y6N7 1651 aa19.5■□□□□ 0.71
ZNF397-212ENST00000601719 TIAM1Q13009 1591 aa19.5■□□□□ 0.71
ZNF397-212ENST00000601719 RBM33Q96EV2 1170 aaKnown RBP19.5■□□□□ 0.71
ZNF397-212ENST00000601719 LRRC9Q6ZRR7 1453 aa19.49■□□□□ 0.71
ZNF397-212ENST00000601719 MAP3K1Q13233 1512 aa19.49■□□□□ 0.71
ZNF397-212ENST00000601719 TMEM2Q9UHN6 1383 aa19.48■□□□□ 0.71
ZNF397-212ENST00000601719 TSPY4P0CV99 314 aa19.48■□□□□ 0.71
ZNF397-212ENST00000601719 TSPY10P0CW01 314 aa19.48■□□□□ 0.71
ZNF397-212ENST00000601719 SPATA31A6Q5VVP1 1343 aa19.48■□□□□ 0.71
ZNF397-212ENST00000601719 CHIC1Q5VXU3 224 aa19.47■□□□□ 0.71
ZNF397-212ENST00000601719 CEP162Q5TB80 1403 aa19.47■□□□□ 0.71
ZNF397-212ENST00000601719 UBR1Q8IWV7 1749 aa19.47■□□□□ 0.71
ZNF397-212ENST00000601719 RXRBP28702 533 aa19.46■□□□□ 0.71
ZNF397-212ENST00000601719 LRP6O75581 1613 aa19.44■□□□□ 0.7
ZNF397-212ENST00000601719 PRDM15P57071 1507 aaPredicted RBP19.43■□□□□ 0.7
ZNF397-212ENST00000601719 SLC26A8Q96RN1 970 aa19.43■□□□□ 0.7
ZNF397-212ENST00000601719 FGD6Q6ZV73 1430 aa19.42■□□□□ 0.7
ZNF397-212ENST00000601719 MSH6P52701 1360 aa19.42■□□□□ 0.7
ZNF397-212ENST00000601719 ARHGAP31Q2M1Z3 1444 aa19.42■□□□□ 0.7
ZNF397-212ENST00000601719 CDK12Q9NYV4 1490 aaPredicted RBP19.41■□□□□ 0.7
ZNF397-212ENST00000601719 CAMSAP2Q08AD1 1489 aa19.41■□□□□ 0.7
ZNF397-212ENST00000601719 MEX3CQ5U5Q3 659 aaKnown RBP19.4■□□□□ 0.7
ZNF397-212ENST00000601719 TET3O43151 1660 aa19.4■□□□□ 0.7
ZNF397-212ENST00000601719 NKTRP30414 1462 aaKnown RBP19.37■□□□□ 0.69
ZNF397-212ENST00000601719 MROH1Q8NDA8 1641 aa19.36■□□□□ 0.69
ZNF397-212ENST00000601719 IDI1Q13907 227 aa19.36■□□□□ 0.69
ZNF397-212ENST00000601719 COL16A1Q07092 1604 aaPredicted RBP19.36■□□□□ 0.69
ZNF397-212ENST00000601719 ARHGEF5Q12774 1597 aa19.36■□□□□ 0.69
ZNF397-212ENST00000601719 EHBP1L1Q8N3D4 1523 aa19.35■□□□□ 0.69
ZNF397-212ENST00000601719 PHLPP1O60346 1717 aa19.35■□□□□ 0.69
ZNF397-212ENST00000601719 STAG3Q9UJ98 1225 aa19.34■□□□□ 0.69
ZNF397-212ENST00000601719 NWD1Q149M9 1564 aa19.31■□□□□ 0.68
ZNF397-212ENST00000601719 NCOA3Q9Y6Q9 1424 aa19.3■□□□□ 0.68
ZNF397-212ENST00000601719 EIF2AK4Q9P2K8 1649 aaKnown RBP19.29■□□□□ 0.68
ZNF397-212ENST00000601719 AFF2P51816 1311 aa19.28■□□□□ 0.68
ZNF397-212ENST00000601719 EFCAB6Q5THR3 1501 aa19.28■□□□□ 0.68
ZNF397-212ENST00000601719 PIK3C2BO00750 1634 aa19.27■□□□□ 0.68
ZNF397-212ENST00000601719 RBM6P78332 1123 aaKnown RBP19.27■□□□□ 0.68
ZNF397-212ENST00000601719 CFAP65Q6ZU64 1925 aaKnown RBP19.27■□□□□ 0.67
ZNF397-212ENST00000601719 MAST1Q9Y2H9 1570 aa19.27■□□□□ 0.67
ZNF397-212ENST00000601719 CADPS2Q86UW7 1296 aa19.26■□□□□ 0.67
ZNF397-212ENST00000601719 C19orf44Q9H6X5 657 aa19.26■□□□□ 0.67
ZNF397-212ENST00000601719 NUTM2BA6NNL0 878 aaPredicted RBP19.25■□□□□ 0.67
ZNF397-212ENST00000601719 NUTM2EB1AL46 878 aaPredicted RBP19.25■□□□□ 0.67
ZNF397-212ENST00000601719 NUTM2AQ8IVF1 878 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms